MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Borrelia burgdorferi N40 plasmid N40_cp32-5

Total Repeats: 103

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_017398	TAA	2	6	46	51	66.67 %	33.33 %	0 %	0 %	Non-Coding
2	NC_017398	AGG	2	6	3370	3375	33.33 %	0 %	66.67 %	0 %	Non-Coding
3	NC_017398	AGG	2	6	3967	3972	33.33 %	0 %	66.67 %	0 %	Non-Coding
4	NC_017398	CTT	2	6	6632	6637	0 %	66.67 %	0 %	33.33 %	Non-Coding
5	NC_017398	TCT	2	6	6712	6717	0 %	66.67 %	0 %	33.33 %	Non-Coding
6	NC_017398	AGT	2	6	10926	10931	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
7	NC_017398	TAA	2	6	11042	11047	66.67 %	33.33 %	0 %	0 %	Non-Coding
8	NC_017398	TAA	2	6	11171	11176	66.67 %	33.33 %	0 %	0 %	Non-Coding
9	NC_017398	AAT	2	6	11181	11186	66.67 %	33.33 %	0 %	0 %	Non-Coding
10	NC_017398	CTT	2	6	11252	11257	0 %	66.67 %	0 %	33.33 %	Non-Coding
11	NC_017398	AAG	2	6	11292	11297	66.67 %	0 %	33.33 %	0 %	Non-Coding
12	NC_017398	ATC	2	6	11343	11348	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
13	NC_017398	GTG	2	6	11354	11359	0 %	33.33 %	66.67 %	0 %	Non-Coding
14	NC_017398	AGC	2	6	11361	11366	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
15	NC_017398	GTC	2	6	11580	11585	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
16	NC_017398	CAT	2	6	11603	11608	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
17	NC_017398	TAA	2	6	11630	11635	66.67 %	33.33 %	0 %	0 %	Non-Coding
18	NC_017398	ACA	2	6	11638	11643	66.67 %	0 %	0 %	33.33 %	Non-Coding
19	NC_017398	TTA	2	6	11845	11850	33.33 %	66.67 %	0 %	0 %	Non-Coding
20	NC_017398	AGC	2	6	11877	11882	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
21	NC_017398	TTA	2	6	11887	11892	33.33 %	66.67 %	0 %	0 %	Non-Coding
22	NC_017398	TAA	2	6	11932	11937	66.67 %	33.33 %	0 %	0 %	Non-Coding
23	NC_017398	CTA	2	6	11944	11949	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
24	NC_017398	TCC	2	6	12008	12013	0 %	33.33 %	0 %	66.67 %	Non-Coding
25	NC_017398	TAC	2	6	12184	12189	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
26	NC_017398	AAC	2	6	12344	12349	66.67 %	0 %	0 %	33.33 %	Non-Coding
27	NC_017398	AGG	2	6	12416	12421	33.33 %	0 %	66.67 %	0 %	Non-Coding
28	NC_017398	CTA	2	6	17170	17175	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
29	NC_017398	ATA	2	6	17201	17206	66.67 %	33.33 %	0 %	0 %	Non-Coding
30	NC_017398	TAA	2	6	17230	17235	66.67 %	33.33 %	0 %	0 %	Non-Coding
31	NC_017398	TAA	3	9	17252	17260	66.67 %	33.33 %	0 %	0 %	Non-Coding
32	NC_017398	TGC	2	6	17744	17749	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
33	NC_017398	ATC	2	6	17858	17863	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
34	NC_017398	TCT	2	6	17949	17954	0 %	66.67 %	0 %	33.33 %	Non-Coding
35	NC_017398	ATC	2	6	17960	17965	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
36	NC_017398	TAT	2	6	18001	18006	33.33 %	66.67 %	0 %	0 %	Non-Coding
37	NC_017398	GTT	2	6	18107	18112	0 %	66.67 %	33.33 %	0 %	Non-Coding
38	NC_017398	ATT	2	6	18206	18211	33.33 %	66.67 %	0 %	0 %	Non-Coding
39	NC_017398	TGC	2	6	18221	18226	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
40	NC_017398	CAA	2	6	18301	18306	66.67 %	0 %	0 %	33.33 %	Non-Coding
41	NC_017398	AAC	2	6	18428	18433	66.67 %	0 %	0 %	33.33 %	Non-Coding
42	NC_017398	CTA	2	6	18526	18531	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
43	NC_017398	ATT	2	6	18644	18649	33.33 %	66.67 %	0 %	0 %	Non-Coding
44	NC_017398	ATT	3	9	18662	18670	33.33 %	66.67 %	0 %	0 %	Non-Coding
45	NC_017398	TCC	2	6	18694	18699	0 %	33.33 %	0 %	66.67 %	Non-Coding
46	NC_017398	TAA	2	6	18710	18715	66.67 %	33.33 %	0 %	0 %	Non-Coding
47	NC_017398	CTA	2	6	18803	18808	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
48	NC_017398	TAA	2	6	18976	18981	66.67 %	33.33 %	0 %	0 %	Non-Coding
49	NC_017398	TAA	2	6	19052	19057	66.67 %	33.33 %	0 %	0 %	Non-Coding
50	NC_017398	GTA	2	6	21515	21520	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
51	NC_017398	TAA	2	6	22670	22675	66.67 %	33.33 %	0 %	0 %	Non-Coding
52	NC_017398	AAT	2	6	22760	22765	66.67 %	33.33 %	0 %	0 %	Non-Coding
53	NC_017398	TTA	2	6	22839	22844	33.33 %	66.67 %	0 %	0 %	Non-Coding
54	NC_017398	TAA	2	6	22865	22870	66.67 %	33.33 %	0 %	0 %	Non-Coding
55	NC_017398	ATA	2	6	22885	22890	66.67 %	33.33 %	0 %	0 %	Non-Coding
56	NC_017398	GGA	2	6	23112	23117	33.33 %	0 %	66.67 %	0 %	Non-Coding
57	NC_017398	CAA	2	6	24381	24386	66.67 %	0 %	0 %	33.33 %	Non-Coding
58	NC_017398	AAT	2	6	24425	24430	66.67 %	33.33 %	0 %	0 %	Non-Coding
59	NC_017398	AAT	2	6	24473	24478	66.67 %	33.33 %	0 %	0 %	Non-Coding
60	NC_017398	TAA	2	6	25762	25767	66.67 %	33.33 %	0 %	0 %	Non-Coding
61	NC_017398	GTG	2	6	25978	25983	0 %	33.33 %	66.67 %	0 %	Non-Coding
62	NC_017398	GAA	2	6	26775	26780	66.67 %	0 %	33.33 %	0 %	Non-Coding
63	NC_017398	CAA	2	6	26787	26792	66.67 %	0 %	0 %	33.33 %	Non-Coding
64	NC_017398	TTC	2	6	26802	26807	0 %	66.67 %	0 %	33.33 %	Non-Coding
65	NC_017398	CTT	2	6	27508	27513	0 %	66.67 %	0 %	33.33 %	Non-Coding
66	NC_017398	TAA	2	6	27580	27585	66.67 %	33.33 %	0 %	0 %	Non-Coding
67	NC_017398	AGC	2	6	27601	27606	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
68	NC_017398	TAA	2	6	27628	27633	66.67 %	33.33 %	0 %	0 %	Non-Coding
69	NC_017398	TTA	2	6	27668	27673	33.33 %	66.67 %	0 %	0 %	Non-Coding
70	NC_017398	TGA	2	6	27723	27728	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
71	NC_017398	TGC	2	6	27732	27737	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
72	NC_017398	GAA	2	6	27777	27782	66.67 %	0 %	33.33 %	0 %	Non-Coding
73	NC_017398	GTT	2	6	27844	27849	0 %	66.67 %	33.33 %	0 %	Non-Coding
74	NC_017398	AGT	2	6	28081	28086	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
75	NC_017398	TGA	2	6	28140	28145	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
76	NC_017398	ACA	2	6	28290	28295	66.67 %	0 %	0 %	33.33 %	Non-Coding
77	NC_017398	TTC	2	6	28358	28363	0 %	66.67 %	0 %	33.33 %	Non-Coding
78	NC_017398	GAA	3	9	28383	28391	66.67 %	0 %	33.33 %	0 %	Non-Coding
79	NC_017398	AAT	2	6	28437	28442	66.67 %	33.33 %	0 %	0 %	Non-Coding
80	NC_017398	AGA	2	6	28447	28452	66.67 %	0 %	33.33 %	0 %	Non-Coding
81	NC_017398	AAT	2	6	28554	28559	66.67 %	33.33 %	0 %	0 %	Non-Coding
82	NC_017398	CTT	2	6	28629	28634	0 %	66.67 %	0 %	33.33 %	Non-Coding
83	NC_017398	TGG	2	6	28706	28711	0 %	33.33 %	66.67 %	0 %	Non-Coding
84	NC_017398	AGG	2	6	28804	28809	33.33 %	0 %	66.67 %	0 %	Non-Coding
85	NC_017398	TAT	2	6	28841	28846	33.33 %	66.67 %	0 %	0 %	Non-Coding
86	NC_017398	ATC	2	6	28864	28869	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
87	NC_017398	ATA	2	6	28900	28905	66.67 %	33.33 %	0 %	0 %	Non-Coding
88	NC_017398	TGC	2	6	28948	28953	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
89	NC_017398	CAT	2	6	29002	29007	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
90	NC_017398	TGA	2	6	29078	29083	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
91	NC_017398	TGA	2	6	29171	29176	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
92	NC_017398	TAT	2	6	29181	29186	33.33 %	66.67 %	0 %	0 %	Non-Coding
93	NC_017398	TAT	2	6	29228	29233	33.33 %	66.67 %	0 %	0 %	Non-Coding
94	NC_017398	ATA	2	6	29296	29301	66.67 %	33.33 %	0 %	0 %	Non-Coding
95	NC_017398	TGG	2	6	29312	29317	0 %	33.33 %	66.67 %	0 %	Non-Coding
96	NC_017398	AAG	2	6	29342	29347	66.67 %	0 %	33.33 %	0 %	Non-Coding
97	NC_017398	TAA	2	6	29393	29398	66.67 %	33.33 %	0 %	0 %	Non-Coding
98	NC_017398	AAC	2	6	29411	29416	66.67 %	0 %	0 %	33.33 %	Non-Coding
99	NC_017398	AGT	2	6	29463	29468	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
100	NC_017398	TCT	2	6	29469	29474	0 %	66.67 %	0 %	33.33 %	Non-Coding
101	NC_017398	ATG	3	9	29518	29526	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
102	NC_017398	GCA	2	6	29544	29549	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
103	NC_017398	TGT	2	6	29557	29562	0 %	66.67 %	33.33 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.