MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Borrelia burgdorferi JD1 plasmid JD1 cp32-12

Total Repeats: 51

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_017396	TAA	2	6	46	51	66.67 %	33.33 %	0 %	0 %	Non-Coding
2	NC_017396	AGG	2	6	3356	3361	33.33 %	0 %	66.67 %	0 %	Non-Coding
3	NC_017396	GGA	2	6	3951	3956	33.33 %	0 %	66.67 %	0 %	Non-Coding
4	NC_017396	ATA	2	6	16558	16563	66.67 %	33.33 %	0 %	0 %	Non-Coding
5	NC_017396	CTA	2	6	17160	17165	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
6	NC_017396	ATA	2	6	17191	17196	66.67 %	33.33 %	0 %	0 %	Non-Coding
7	NC_017396	TAA	2	6	17220	17225	66.67 %	33.33 %	0 %	0 %	Non-Coding
8	NC_017396	TAA	3	9	17242	17250	66.67 %	33.33 %	0 %	0 %	Non-Coding
9	NC_017396	TTG	2	6	17730	17735	0 %	66.67 %	33.33 %	0 %	Non-Coding
10	NC_017396	TCC	2	6	18758	18763	0 %	33.33 %	0 %	66.67 %	Non-Coding
11	NC_017396	TAA	2	6	18776	18781	66.67 %	33.33 %	0 %	0 %	Non-Coding
12	NC_017396	TAC	2	6	18941	18946	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
13	NC_017396	GTA	2	6	18954	18959	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
14	NC_017396	TAA	2	6	19094	19099	66.67 %	33.33 %	0 %	0 %	Non-Coding
15	NC_017396	ATT	2	6	19103	19108	33.33 %	66.67 %	0 %	0 %	Non-Coding
16	NC_017396	TAA	2	6	22764	22769	66.67 %	33.33 %	0 %	0 %	Non-Coding
17	NC_017396	TTG	2	6	22887	22892	0 %	66.67 %	33.33 %	0 %	Non-Coding
18	NC_017396	TAA	2	6	22915	22920	66.67 %	33.33 %	0 %	0 %	Non-Coding
19	NC_017396	TTA	2	6	22944	22949	33.33 %	66.67 %	0 %	0 %	Non-Coding
20	NC_017396	TAA	2	6	22970	22975	66.67 %	33.33 %	0 %	0 %	Non-Coding
21	NC_017396	TAA	2	6	22991	22996	66.67 %	33.33 %	0 %	0 %	Non-Coding
22	NC_017396	TTA	2	6	23198	23203	33.33 %	66.67 %	0 %	0 %	Non-Coding
23	NC_017396	GGA	2	6	23216	23221	33.33 %	0 %	66.67 %	0 %	Non-Coding
24	NC_017396	AAT	3	9	23245	23253	66.67 %	33.33 %	0 %	0 %	Non-Coding
25	NC_017396	ATA	2	6	23267	23272	66.67 %	33.33 %	0 %	0 %	Non-Coding
26	NC_017396	AGG	2	6	23277	23282	33.33 %	0 %	66.67 %	0 %	Non-Coding
27	NC_017396	AAT	2	6	23328	23333	66.67 %	33.33 %	0 %	0 %	Non-Coding
28	NC_017396	TCT	2	6	23344	23349	0 %	66.67 %	0 %	33.33 %	Non-Coding
29	NC_017396	AGT	2	6	23404	23409	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
30	NC_017396	TGA	2	6	23528	23533	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
31	NC_017396	ATA	2	6	23651	23656	66.67 %	33.33 %	0 %	0 %	Non-Coding
32	NC_017396	ATT	2	6	23705	23710	33.33 %	66.67 %	0 %	0 %	Non-Coding
33	NC_017396	CAA	2	6	23747	23752	66.67 %	0 %	0 %	33.33 %	Non-Coding
34	NC_017396	AGC	2	6	23869	23874	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
35	NC_017396	GCA	2	6	23962	23967	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
36	NC_017396	ATA	3	9	24077	24085	66.67 %	33.33 %	0 %	0 %	Non-Coding
37	NC_017396	ATA	2	6	24110	24115	66.67 %	33.33 %	0 %	0 %	Non-Coding
38	NC_017396	TAG	2	6	24143	24148	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
39	NC_017396	AAG	2	6	24150	24155	66.67 %	0 %	33.33 %	0 %	Non-Coding
40	NC_017396	AGC	2	6	24401	24406	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
41	NC_017396	ACT	2	6	24480	24485	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
42	NC_017396	CAA	2	6	24488	24493	66.67 %	0 %	0 %	33.33 %	Non-Coding
43	NC_017396	AGG	2	6	24594	24599	33.33 %	0 %	66.67 %	0 %	Non-Coding
44	NC_017396	TAA	2	6	25870	25875	66.67 %	33.33 %	0 %	0 %	Non-Coding
45	NC_017396	GTG	2	6	26086	26091	0 %	33.33 %	66.67 %	0 %	Non-Coding
46	NC_017396	GTA	2	6	26216	26221	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
47	NC_017396	TAT	2	6	27370	27375	33.33 %	66.67 %	0 %	0 %	Non-Coding
48	NC_017396	TAA	2	6	27971	27976	66.67 %	33.33 %	0 %	0 %	Non-Coding
49	NC_017396	AGT	2	6	28020	28025	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
50	NC_017396	TAA	2	6	28032	28037	66.67 %	33.33 %	0 %	0 %	Non-Coding
51	NC_017396	GTT	2	6	28071	28076	0 %	66.67 %	33.33 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.