MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Borrelia burgdorferi JD1 plasmid JD1 cp26

Total Repeats: 49

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_017395	TTA	2	6	772	777	33.33 %	66.67 %	0 %	0 %	Non-Coding
2	NC_017395	ATA	2	6	2299	2304	66.67 %	33.33 %	0 %	0 %	Non-Coding
3	NC_017395	TTA	2	6	2342	2347	33.33 %	66.67 %	0 %	0 %	Non-Coding
4	NC_017395	ATA	2	6	2362	2367	66.67 %	33.33 %	0 %	0 %	Non-Coding
5	NC_017395	TCC	2	6	3810	3815	0 %	33.33 %	0 %	66.67 %	Non-Coding
6	NC_017395	TAT	2	6	3859	3864	33.33 %	66.67 %	0 %	0 %	Non-Coding
7	NC_017395	TAA	2	6	3927	3932	66.67 %	33.33 %	0 %	0 %	Non-Coding
8	NC_017395	ATA	2	6	3955	3960	66.67 %	33.33 %	0 %	0 %	Non-Coding
9	NC_017395	TAA	2	6	3983	3988	66.67 %	33.33 %	0 %	0 %	Non-Coding
10	NC_017395	ATT	2	6	3990	3995	33.33 %	66.67 %	0 %	0 %	Non-Coding
11	NC_017395	ATA	2	6	4041	4046	66.67 %	33.33 %	0 %	0 %	Non-Coding
12	NC_017395	ATT	2	6	4050	4055	33.33 %	66.67 %	0 %	0 %	Non-Coding
13	NC_017395	TAC	2	6	4450	4455	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
14	NC_017395	TAA	2	6	5876	5881	66.67 %	33.33 %	0 %	0 %	Non-Coding
15	NC_017395	TAA	2	6	6597	6602	66.67 %	33.33 %	0 %	0 %	Non-Coding
16	NC_017395	ATT	2	6	6623	6628	33.33 %	66.67 %	0 %	0 %	Non-Coding
17	NC_017395	CAA	2	6	7753	7758	66.67 %	0 %	0 %	33.33 %	Non-Coding
18	NC_017395	ATA	2	6	8776	8781	66.67 %	33.33 %	0 %	0 %	Non-Coding
19	NC_017395	TTG	2	6	10768	10773	0 %	66.67 %	33.33 %	0 %	Non-Coding
20	NC_017395	AAT	2	6	10783	10788	66.67 %	33.33 %	0 %	0 %	Non-Coding
21	NC_017395	AAT	2	6	10842	10847	66.67 %	33.33 %	0 %	0 %	Non-Coding
22	NC_017395	ATA	3	9	11463	11471	66.67 %	33.33 %	0 %	0 %	Non-Coding
23	NC_017395	ATT	2	6	11533	11538	33.33 %	66.67 %	0 %	0 %	Non-Coding
24	NC_017395	CTT	2	6	11545	11550	0 %	66.67 %	0 %	33.33 %	Non-Coding
25	NC_017395	TAA	2	6	11751	11756	66.67 %	33.33 %	0 %	0 %	Non-Coding
26	NC_017395	ATT	2	6	11803	11808	33.33 %	66.67 %	0 %	0 %	Non-Coding
27	NC_017395	ATT	2	6	11876	11881	33.33 %	66.67 %	0 %	0 %	Non-Coding
28	NC_017395	AAT	2	6	11918	11923	66.67 %	33.33 %	0 %	0 %	Non-Coding
29	NC_017395	TAA	2	6	11935	11940	66.67 %	33.33 %	0 %	0 %	Non-Coding
30	NC_017395	ATT	2	6	13709	13714	33.33 %	66.67 %	0 %	0 %	Non-Coding
31	NC_017395	ATT	3	9	13720	13728	33.33 %	66.67 %	0 %	0 %	Non-Coding
32	NC_017395	AGA	2	6	13833	13838	66.67 %	0 %	33.33 %	0 %	Non-Coding
33	NC_017395	TTA	2	6	16707	16712	33.33 %	66.67 %	0 %	0 %	Non-Coding
34	NC_017395	TTC	2	6	16792	16797	0 %	66.67 %	0 %	33.33 %	Non-Coding
35	NC_017395	GAA	2	6	16817	16822	66.67 %	0 %	33.33 %	0 %	Non-Coding
36	NC_017395	TTG	2	6	16866	16871	0 %	66.67 %	33.33 %	0 %	Non-Coding
37	NC_017395	TAA	2	6	16875	16880	66.67 %	33.33 %	0 %	0 %	Non-Coding
38	NC_017395	AGG	2	6	16894	16899	33.33 %	0 %	66.67 %	0 %	Non-Coding
39	NC_017395	CAA	2	6	17669	17674	66.67 %	0 %	0 %	33.33 %	Non-Coding
40	NC_017395	TAA	2	6	17738	17743	66.67 %	33.33 %	0 %	0 %	Non-Coding
41	NC_017395	TAA	2	6	17837	17842	66.67 %	33.33 %	0 %	0 %	Non-Coding
42	NC_017395	TAG	2	6	17849	17854	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
43	NC_017395	CTC	2	6	19358	19363	0 %	33.33 %	0 %	66.67 %	Non-Coding
44	NC_017395	TAA	3	9	19417	19425	66.67 %	33.33 %	0 %	0 %	Non-Coding
45	NC_017395	AAT	3	9	20848	20856	66.67 %	33.33 %	0 %	0 %	Non-Coding
46	NC_017395	TGA	2	6	24542	24547	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
47	NC_017395	AAT	2	6	24609	24614	66.67 %	33.33 %	0 %	0 %	Non-Coding
48	NC_017395	TAT	2	6	24793	24798	33.33 %	66.67 %	0 %	0 %	Non-Coding
49	NC_017395	TAA	2	6	24833	24838	66.67 %	33.33 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.