MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Helicobacter pylori 2018 chromosome

Total Repeats: 80

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_017381	CAAAAA	2	12	5345	5356	83.33 %	0 %	0 %	16.67 %	Non-Coding
2	NC_017381	ATTATA	2	12	9917	9928	50 %	50 %	0 %	0 %	Non-Coding
3	NC_017381	AAACAC	2	12	18487	18498	66.67 %	0 %	0 %	33.33 %	Non-Coding
4	NC_017381	ACTTAG	2	12	44880	44891	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
5	NC_017381	AGAAAA	2	12	60446	60457	83.33 %	0 %	16.67 %	0 %	Non-Coding
6	NC_017381	TACAAA	2	12	94096	94107	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
7	NC_017381	GATAAC	2	12	112442	112453	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
8	NC_017381	ATGATA	2	12	127791	127802	50 %	33.33 %	16.67 %	0 %	Non-Coding
9	NC_017381	GTTTTA	2	12	131184	131195	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
10	NC_017381	TTGTTT	2	12	152822	152833	0 %	83.33 %	16.67 %	0 %	Non-Coding
11	NC_017381	TTTCAC	2	12	163834	163845	16.67 %	50 %	0 %	33.33 %	Non-Coding
12	NC_017381	TAAAAA	2	12	167741	167752	83.33 %	16.67 %	0 %	0 %	Non-Coding
13	NC_017381	GGCGTT	2	12	212945	212956	0 %	33.33 %	50 %	16.67 %	Non-Coding
14	NC_017381	AAAAAC	2	12	212957	212968	83.33 %	0 %	0 %	16.67 %	Non-Coding
15	NC_017381	ATTAAA	2	12	226421	226432	66.67 %	33.33 %	0 %	0 %	Non-Coding
16	NC_017381	ATTTTA	2	12	247925	247936	33.33 %	66.67 %	0 %	0 %	Non-Coding
17	NC_017381	AAATTA	2	12	247960	247971	66.67 %	33.33 %	0 %	0 %	Non-Coding
18	NC_017381	AAATTC	2	12	263018	263029	50 %	33.33 %	0 %	16.67 %	Non-Coding
19	NC_017381	TAGAAA	2	12	324941	324952	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
20	NC_017381	GTTTTT	2	12	357120	357131	0 %	83.33 %	16.67 %	0 %	Non-Coding
21	NC_017381	TTTTAT	2	12	371953	371964	16.67 %	83.33 %	0 %	0 %	Non-Coding
22	NC_017381	AAAATA	2	12	429231	429242	83.33 %	16.67 %	0 %	0 %	Non-Coding
23	NC_017381	AAATTT	2	12	464871	464882	50 %	50 %	0 %	0 %	Non-Coding
24	NC_017381	TATTTT	2	12	466617	466628	16.67 %	83.33 %	0 %	0 %	Non-Coding
25	NC_017381	TAAAAA	2	12	471151	471162	83.33 %	16.67 %	0 %	0 %	Non-Coding
26	NC_017381	TTTTAA	2	12	489294	489305	33.33 %	66.67 %	0 %	0 %	Non-Coding
27	NC_017381	TTGTAA	2	12	511780	511791	33.33 %	50 %	16.67 %	0 %	Non-Coding
28	NC_017381	ATTTAA	2	12	517925	517936	50 %	50 %	0 %	0 %	Non-Coding
29	NC_017381	TTTAAA	2	12	536950	536961	50 %	50 %	0 %	0 %	Non-Coding
30	NC_017381	AGCTAA	2	12	543806	543817	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
31	NC_017381	ATTTTA	2	12	570441	570452	33.33 %	66.67 %	0 %	0 %	Non-Coding
32	NC_017381	TTTTAG	2	12	683386	683397	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
33	NC_017381	AAAAAT	2	12	686499	686510	83.33 %	16.67 %	0 %	0 %	Non-Coding
34	NC_017381	AGCGCA	2	12	695242	695253	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
35	NC_017381	AAATTA	2	12	722419	722430	66.67 %	33.33 %	0 %	0 %	Non-Coding
36	NC_017381	TAAGGG	2	12	740597	740608	33.33 %	16.67 %	50 %	0 %	Non-Coding
37	NC_017381	GAATTT	2	12	740849	740860	33.33 %	50 %	16.67 %	0 %	Non-Coding
38	NC_017381	TAGAAT	2	12	779366	779377	50 %	33.33 %	16.67 %	0 %	Non-Coding
39	NC_017381	ATTATA	2	12	809093	809104	50 %	50 %	0 %	0 %	Non-Coding
40	NC_017381	ATTTTT	2	12	866086	866097	16.67 %	83.33 %	0 %	0 %	Non-Coding
41	NC_017381	AAAATA	2	12	882150	882161	83.33 %	16.67 %	0 %	0 %	Non-Coding
42	NC_017381	TGCATT	2	12	889711	889722	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
43	NC_017381	ATTATA	2	12	911511	911522	50 %	50 %	0 %	0 %	Non-Coding
44	NC_017381	ATTGAA	2	12	919015	919026	50 %	33.33 %	16.67 %	0 %	Non-Coding
45	NC_017381	ATAAAA	2	12	928840	928851	83.33 %	16.67 %	0 %	0 %	Non-Coding
46	NC_017381	TATGGG	2	12	966558	966569	16.67 %	33.33 %	50 %	0 %	Non-Coding
47	NC_017381	TTTGAA	2	12	991366	991377	33.33 %	50 %	16.67 %	0 %	Non-Coding
48	NC_017381	CTTTAA	2	12	1000959	1000970	33.33 %	50 %	0 %	16.67 %	Non-Coding
49	NC_017381	AATTAA	2	12	1044493	1044504	66.67 %	33.33 %	0 %	0 %	Non-Coding
50	NC_017381	GCATTA	2	12	1123205	1123216	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
51	NC_017381	ATCATA	2	12	1125620	1125631	50 %	33.33 %	0 %	16.67 %	Non-Coding
52	NC_017381	TAAAAA	2	12	1143705	1143716	83.33 %	16.67 %	0 %	0 %	Non-Coding
53	NC_017381	GCATTT	2	12	1147835	1147846	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
54	NC_017381	TAAAAT	2	12	1149335	1149346	66.67 %	33.33 %	0 %	0 %	Non-Coding
55	NC_017381	TTTTAA	2	12	1154115	1154126	33.33 %	66.67 %	0 %	0 %	Non-Coding
56	NC_017381	ATTGGT	2	12	1158751	1158762	16.67 %	50 %	33.33 %	0 %	Non-Coding
57	NC_017381	ATCCTT	2	12	1173284	1173295	16.67 %	50 %	0 %	33.33 %	Non-Coding
58	NC_017381	GCGCAT	2	12	1173303	1173314	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
59	NC_017381	TTGTAT	2	12	1175705	1175716	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
60	NC_017381	AAACTT	2	12	1214880	1214891	50 %	33.33 %	0 %	16.67 %	Non-Coding
61	NC_017381	ATTTTT	2	12	1244280	1244291	16.67 %	83.33 %	0 %	0 %	Non-Coding
62	NC_017381	TTTTTA	2	12	1273966	1273977	16.67 %	83.33 %	0 %	0 %	Non-Coding
63	NC_017381	CATACT	2	12	1305177	1305188	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
64	NC_017381	AAGAAA	2	12	1305430	1305441	83.33 %	0 %	16.67 %	0 %	Non-Coding
65	NC_017381	AATTAC	2	12	1308820	1308831	50 %	33.33 %	0 %	16.67 %	Non-Coding
66	NC_017381	ACCCAA	2	12	1310064	1310075	50 %	0 %	0 %	50 %	Non-Coding
67	NC_017381	GCCTAA	2	12	1310076	1310087	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
68	NC_017381	AAGCCT	2	12	1310110	1310121	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
69	NC_017381	GTTTTA	2	12	1358752	1358763	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
70	NC_017381	TTTCTT	2	12	1358800	1358811	0 %	83.33 %	0 %	16.67 %	Non-Coding
71	NC_017381	AGCGGG	2	12	1366914	1366925	16.67 %	0 %	66.67 %	16.67 %	Non-Coding
72	NC_017381	GTTTTA	2	12	1377091	1377102	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
73	NC_017381	TAAAAA	2	12	1377880	1377891	83.33 %	16.67 %	0 %	0 %	Non-Coding
74	NC_017381	TTGATT	2	12	1467532	1467543	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
75	NC_017381	AAACCC	2	12	1467736	1467747	50 %	0 %	0 %	50 %	Non-Coding
76	NC_017381	CAAAAT	2	12	1467917	1467928	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
77	NC_017381	TTTTTC	2	12	1468125	1468136	0 %	83.33 %	0 %	16.67 %	Non-Coding
78	NC_017381	TTTGAC	2	12	1468614	1468625	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
79	NC_017381	TAAATA	2	12	1540054	1540065	66.67 %	33.33 %	0 %	0 %	Non-Coding
80	NC_017381	TAGCGA	2	12	1560884	1560895	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.