MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Helicobacter pylori Puno135 chromosome

Total Repeats: 79

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_017379	AAACAC	2	12	18065	18076	66.67 %	0 %	0 %	33.33 %	Non-Coding
2	NC_017379	TAGACT	2	12	42226	42237	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
3	NC_017379	TACAAA	2	12	91337	91348	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
4	NC_017379	ATAAAA	2	12	105153	105164	83.33 %	16.67 %	0 %	0 %	Non-Coding
5	NC_017379	GTTTTA	2	12	128523	128534	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
6	NC_017379	TAAAAA	2	12	164434	164445	83.33 %	16.67 %	0 %	0 %	Non-Coding
7	NC_017379	ATTCTT	2	12	182597	182608	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
8	NC_017379	TTTTCC	2	12	199896	199907	0 %	66.67 %	0 %	33.33 %	Non-Coding
9	NC_017379	ACTCAA	2	12	201626	201637	50 %	16.67 %	0 %	33.33 %	Non-Coding
10	NC_017379	TATAAC	2	12	208443	208454	50 %	33.33 %	0 %	16.67 %	Non-Coding
11	NC_017379	ATTAAA	2	12	222226	222237	66.67 %	33.33 %	0 %	0 %	Non-Coding
12	NC_017379	ATTTTA	2	12	245071	245082	33.33 %	66.67 %	0 %	0 %	Non-Coding
13	NC_017379	ATTGAA	2	12	317236	317247	50 %	33.33 %	16.67 %	0 %	Non-Coding
14	NC_017379	GATTTA	2	12	319169	319180	33.33 %	50 %	16.67 %	0 %	Non-Coding
15	NC_017379	CAAAGC	2	12	322040	322051	50 %	0 %	16.67 %	33.33 %	Non-Coding
16	NC_017379	TGGCTA	2	12	339169	339180	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
17	NC_017379	TTTATT	2	12	378472	378483	16.67 %	83.33 %	0 %	0 %	Non-Coding
18	NC_017379	AATTGG	2	12	402843	402854	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
19	NC_017379	AAAATA	2	12	431809	431820	83.33 %	16.67 %	0 %	0 %	Non-Coding
20	NC_017379	TAAAAA	2	12	445926	445937	83.33 %	16.67 %	0 %	0 %	Non-Coding
21	NC_017379	ATTTTT	2	12	457346	457357	16.67 %	83.33 %	0 %	0 %	Non-Coding
22	NC_017379	TATTTT	2	12	470888	470899	16.67 %	83.33 %	0 %	0 %	Non-Coding
23	NC_017379	TTTAAT	2	12	481655	481666	33.33 %	66.67 %	0 %	0 %	Non-Coding
24	NC_017379	TTTAAA	2	12	544374	544385	50 %	50 %	0 %	0 %	Non-Coding
25	NC_017379	TTAGGG	2	12	557880	557891	16.67 %	33.33 %	50 %	0 %	Non-Coding
26	NC_017379	ATTTTA	2	12	576969	576980	33.33 %	66.67 %	0 %	0 %	Non-Coding
27	NC_017379	TCAAGA	2	12	581595	581606	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
28	NC_017379	AAAATC	2	12	584065	584076	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
29	NC_017379	TGATTT	2	12	629986	629997	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
30	NC_017379	AAGAAA	2	12	683661	683672	83.33 %	0 %	16.67 %	0 %	Non-Coding
31	NC_017379	AAAAAT	2	12	689518	689529	83.33 %	16.67 %	0 %	0 %	Non-Coding
32	NC_017379	ATTTTA	2	12	720220	720231	33.33 %	66.67 %	0 %	0 %	Non-Coding
33	NC_017379	GTTGAT	2	12	737882	737893	16.67 %	50 %	33.33 %	0 %	Non-Coding
34	NC_017379	CGGCTT	2	12	749677	749688	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
35	NC_017379	AAAACT	2	12	850787	850798	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
36	NC_017379	ATTTTT	2	12	877571	877582	16.67 %	83.33 %	0 %	0 %	Non-Coding
37	NC_017379	ATTATA	2	12	920742	920753	50 %	50 %	0 %	0 %	Non-Coding
38	NC_017379	ATTGAA	2	12	928151	928162	50 %	33.33 %	16.67 %	0 %	Non-Coding
39	NC_017379	AAATTA	2	12	949337	949348	66.67 %	33.33 %	0 %	0 %	Non-Coding
40	NC_017379	TTTTTC	2	12	977046	977057	0 %	83.33 %	0 %	16.67 %	Non-Coding
41	NC_017379	TTAAAA	2	12	978613	978624	66.67 %	33.33 %	0 %	0 %	Non-Coding
42	NC_017379	GCTGAA	2	12	987657	987668	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
43	NC_017379	TAGGCT	2	12	1014526	1014537	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
44	NC_017379	ACTCAA	2	12	1018022	1018033	50 %	16.67 %	0 %	33.33 %	Non-Coding
45	NC_017379	CCTAAT	2	12	1018144	1018155	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
46	NC_017379	CTTTTT	2	12	1018336	1018347	0 %	83.33 %	0 %	16.67 %	Non-Coding
47	NC_017379	ACTTTG	2	12	1019267	1019278	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
48	NC_017379	AAGGTA	2	12	1019516	1019527	50 %	16.67 %	33.33 %	0 %	Non-Coding
49	NC_017379	TTCTAA	2	12	1029915	1029926	33.33 %	50 %	0 %	16.67 %	Non-Coding
50	NC_017379	CGCTTA	2	12	1034183	1034194	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
51	NC_017379	ATCAAT	2	12	1039458	1039469	50 %	33.33 %	0 %	16.67 %	Non-Coding
52	NC_017379	TTTTTC	2	12	1041417	1041428	0 %	83.33 %	0 %	16.67 %	Non-Coding
53	NC_017379	CATGCG	2	12	1041788	1041799	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
54	NC_017379	ATTTTA	2	12	1048309	1048320	33.33 %	66.67 %	0 %	0 %	Non-Coding
55	NC_017379	AGATTG	2	12	1053785	1053796	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
56	NC_017379	CTAAAA	2	12	1059345	1059356	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
57	NC_017379	TTATAC	2	12	1060675	1060686	33.33 %	50 %	0 %	16.67 %	Non-Coding
58	NC_017379	AATGAG	2	12	1106834	1106845	50 %	16.67 %	33.33 %	0 %	Non-Coding
59	NC_017379	AATTAA	2	12	1113839	1113850	66.67 %	33.33 %	0 %	0 %	Non-Coding
60	NC_017379	TTTTGT	2	12	1233362	1233373	0 %	83.33 %	16.67 %	0 %	Non-Coding
61	NC_017379	TTGTAT	2	12	1250521	1250532	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
62	NC_017379	ACTTAA	2	12	1268638	1268649	50 %	33.33 %	0 %	16.67 %	Non-Coding
63	NC_017379	TCATTT	2	12	1290906	1290917	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
64	NC_017379	AAACTT	2	12	1290929	1290940	50 %	33.33 %	0 %	16.67 %	Non-Coding
65	NC_017379	ATTTTT	2	12	1322659	1322670	16.67 %	83.33 %	0 %	0 %	Non-Coding
66	NC_017379	TAAAAA	2	12	1350681	1350692	83.33 %	16.67 %	0 %	0 %	Non-Coding
67	NC_017379	AGTTTT	2	12	1435343	1435354	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
68	NC_017379	TTATAC	2	12	1438345	1438356	33.33 %	50 %	0 %	16.67 %	Non-Coding
69	NC_017379	AGCGGG	2	12	1446597	1446608	16.67 %	0 %	66.67 %	16.67 %	Non-Coding
70	NC_017379	GTTTTA	2	12	1456793	1456804	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
71	NC_017379	TAAAAA	2	12	1457631	1457642	83.33 %	16.67 %	0 %	0 %	Non-Coding
72	NC_017379	TGTTTA	2	12	1475146	1475157	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
73	NC_017379	TTGATT	2	12	1551444	1551455	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
74	NC_017379	AAACCC	2	12	1551645	1551656	50 %	0 %	0 %	50 %	Non-Coding
75	NC_017379	CAAAAT	2	12	1551826	1551837	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
76	NC_017379	TTTTTC	2	12	1552034	1552045	0 %	83.33 %	0 %	16.67 %	Non-Coding
77	NC_017379	AACACA	2	12	1554741	1554752	66.67 %	0 %	0 %	33.33 %	Non-Coding
78	NC_017379	TAAAAA	2	12	1583783	1583794	83.33 %	16.67 %	0 %	0 %	Non-Coding
79	NC_017379	GTGTGA	2	12	1626466	1626477	16.67 %	33.33 %	50 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.