MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Helicobacter pylori 2017 chromosome

Total Repeats: 70

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_017374	ATTATA	2	12	7666	7677	50 %	50 %	0 %	0 %	Non-Coding
2	NC_017374	AAACAC	2	12	16235	16246	66.67 %	0 %	0 %	33.33 %	Non-Coding
3	NC_017374	ACTTAG	2	12	42648	42659	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
4	NC_017374	AGAAAA	2	12	58214	58225	83.33 %	0 %	16.67 %	0 %	Non-Coding
5	NC_017374	TACAAA	2	12	91865	91876	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
6	NC_017374	TAAAAT	2	12	105611	105622	66.67 %	33.33 %	0 %	0 %	Non-Coding
7	NC_017374	GATAAC	2	12	110218	110229	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
8	NC_017374	ATGATA	2	12	125569	125580	50 %	33.33 %	16.67 %	0 %	Non-Coding
9	NC_017374	GTTTTA	2	12	128963	128974	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
10	NC_017374	TTGTTT	2	12	150521	150532	0 %	83.33 %	16.67 %	0 %	Non-Coding
11	NC_017374	TTTCAC	2	12	161533	161544	16.67 %	50 %	0 %	33.33 %	Non-Coding
12	NC_017374	TAAAAA	2	12	165443	165454	83.33 %	16.67 %	0 %	0 %	Non-Coding
13	NC_017374	GGCGTT	2	12	210594	210605	0 %	33.33 %	50 %	16.67 %	Non-Coding
14	NC_017374	AAAAAC	2	12	210606	210617	83.33 %	0 %	0 %	16.67 %	Non-Coding
15	NC_017374	ATTAAA	2	12	224077	224088	66.67 %	33.33 %	0 %	0 %	Non-Coding
16	NC_017374	ATTTTA	2	12	245717	245728	33.33 %	66.67 %	0 %	0 %	Non-Coding
17	NC_017374	AAATTA	2	12	245752	245763	66.67 %	33.33 %	0 %	0 %	Non-Coding
18	NC_017374	AAATTC	2	12	260809	260820	50 %	33.33 %	0 %	16.67 %	Non-Coding
19	NC_017374	GTTTTT	2	12	355060	355071	0 %	83.33 %	16.67 %	0 %	Non-Coding
20	NC_017374	TTTTAT	2	12	369893	369904	16.67 %	83.33 %	0 %	0 %	Non-Coding
21	NC_017374	AAAATA	2	12	427172	427183	83.33 %	16.67 %	0 %	0 %	Non-Coding
22	NC_017374	AAATTT	2	12	462747	462758	50 %	50 %	0 %	0 %	Non-Coding
23	NC_017374	TATTTT	2	12	464493	464504	16.67 %	83.33 %	0 %	0 %	Non-Coding
24	NC_017374	TAAAAA	2	12	469027	469038	83.33 %	16.67 %	0 %	0 %	Non-Coding
25	NC_017374	TTTTAA	2	12	487170	487181	33.33 %	66.67 %	0 %	0 %	Non-Coding
26	NC_017374	TTGTAA	2	12	509680	509691	33.33 %	50 %	16.67 %	0 %	Non-Coding
27	NC_017374	ATTTAA	2	12	515825	515836	50 %	50 %	0 %	0 %	Non-Coding
28	NC_017374	TTTAAA	2	12	534850	534861	50 %	50 %	0 %	0 %	Non-Coding
29	NC_017374	AGCTAA	2	12	541706	541717	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
30	NC_017374	GGCTTT	2	12	561901	561912	0 %	50 %	33.33 %	16.67 %	Non-Coding
31	NC_017374	ATTTTA	2	12	568349	568360	33.33 %	66.67 %	0 %	0 %	Non-Coding
32	NC_017374	AAAAAT	2	12	684401	684412	83.33 %	16.67 %	0 %	0 %	Non-Coding
33	NC_017374	AGCGCA	2	12	693144	693155	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
34	NC_017374	AAATTA	2	12	720321	720332	66.67 %	33.33 %	0 %	0 %	Non-Coding
35	NC_017374	TAAGGG	2	12	738566	738577	33.33 %	16.67 %	50 %	0 %	Non-Coding
36	NC_017374	GAATTT	2	12	738818	738829	33.33 %	50 %	16.67 %	0 %	Non-Coding
37	NC_017374	TAGAAT	2	12	777356	777367	50 %	33.33 %	16.67 %	0 %	Non-Coding
38	NC_017374	ATTATA	2	12	807081	807092	50 %	50 %	0 %	0 %	Non-Coding
39	NC_017374	ATTTTT	2	12	863760	863771	16.67 %	83.33 %	0 %	0 %	Non-Coding
40	NC_017374	AAAATA	2	12	879825	879836	83.33 %	16.67 %	0 %	0 %	Non-Coding
41	NC_017374	TGCATT	2	12	887205	887216	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
42	NC_017374	ATTATA	2	12	908958	908969	50 %	50 %	0 %	0 %	Non-Coding
43	NC_017374	ATTGAA	2	12	916471	916482	50 %	33.33 %	16.67 %	0 %	Non-Coding
44	NC_017374	ATAAAA	2	12	926296	926307	83.33 %	16.67 %	0 %	0 %	Non-Coding
45	NC_017374	TTTGAA	2	12	983411	983422	33.33 %	50 %	16.67 %	0 %	Non-Coding
46	NC_017374	CTTTAA	2	12	993179	993190	33.33 %	50 %	0 %	16.67 %	Non-Coding
47	NC_017374	AATTAA	2	12	1036716	1036727	66.67 %	33.33 %	0 %	0 %	Non-Coding
48	NC_017374	GCATTA	2	12	1115372	1115383	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
49	NC_017374	TAAAAA	2	12	1135400	1135411	83.33 %	16.67 %	0 %	0 %	Non-Coding
50	NC_017374	GCATTT	2	12	1139530	1139541	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
51	NC_017374	TAAAAT	2	12	1141030	1141041	66.67 %	33.33 %	0 %	0 %	Non-Coding
52	NC_017374	TTTTAA	2	12	1145809	1145820	33.33 %	66.67 %	0 %	0 %	Non-Coding
53	NC_017374	ATTGGT	2	12	1150445	1150456	16.67 %	50 %	33.33 %	0 %	Non-Coding
54	NC_017374	ATCCTT	2	12	1165050	1165061	16.67 %	50 %	0 %	33.33 %	Non-Coding
55	NC_017374	GCGCAT	2	12	1165069	1165080	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
56	NC_017374	TTGTAT	2	12	1167471	1167482	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
57	NC_017374	AAACTT	2	12	1206645	1206656	50 %	33.33 %	0 %	16.67 %	Non-Coding
58	NC_017374	ATTTTT	2	12	1235908	1235919	16.67 %	83.33 %	0 %	0 %	Non-Coding
59	NC_017374	TTTTTA	2	12	1265595	1265606	16.67 %	83.33 %	0 %	0 %	Non-Coding
60	NC_017374	CATACT	2	12	1296816	1296827	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
61	NC_017374	AAGAAA	2	12	1297069	1297080	83.33 %	0 %	16.67 %	0 %	Non-Coding
62	NC_017374	AATTAC	2	12	1300459	1300470	50 %	33.33 %	0 %	16.67 %	Non-Coding
63	NC_017374	GTTTTA	2	12	1351428	1351439	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
64	NC_017374	TTTCTT	2	12	1351476	1351487	0 %	83.33 %	0 %	16.67 %	Non-Coding
65	NC_017374	AGCGGG	2	12	1360287	1360298	16.67 %	0 %	66.67 %	16.67 %	Non-Coding
66	NC_017374	GTTTTA	2	12	1370464	1370475	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
67	NC_017374	TAAAAA	2	12	1371253	1371264	83.33 %	16.67 %	0 %	0 %	Non-Coding
68	NC_017374	ACCCAA	2	12	1386494	1386505	50 %	0 %	0 %	50 %	Non-Coding
69	NC_017374	TAAATA	2	12	1525248	1525259	66.67 %	33.33 %	0 %	0 %	Non-Coding
70	NC_017374	TAGCGA	2	12	1546266	1546277	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.