MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Staphylococcus aureus subsp. aureus TCH60 plasmid unnamed

Total Repeats: 97

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_017345	ATT	2	6	25	30	33.33 %	66.67 %	0 %	0 %	Non-Coding
2	NC_017345	AAT	3	9	124	132	66.67 %	33.33 %	0 %	0 %	Non-Coding
3	NC_017345	ATA	2	6	176	181	66.67 %	33.33 %	0 %	0 %	Non-Coding
4	NC_017345	TAA	2	6	222	227	66.67 %	33.33 %	0 %	0 %	Non-Coding
5	NC_017345	ATA	2	6	246	251	66.67 %	33.33 %	0 %	0 %	Non-Coding
6	NC_017345	ATT	2	6	277	282	33.33 %	66.67 %	0 %	0 %	Non-Coding
7	NC_017345	TAA	2	6	361	366	66.67 %	33.33 %	0 %	0 %	Non-Coding
8	NC_017345	TAT	2	6	367	372	33.33 %	66.67 %	0 %	0 %	Non-Coding
9	NC_017345	TAA	2	6	417	422	66.67 %	33.33 %	0 %	0 %	Non-Coding
10	NC_017345	ACA	2	6	438	443	66.67 %	0 %	0 %	33.33 %	Non-Coding
11	NC_017345	GAA	2	6	530	535	66.67 %	0 %	33.33 %	0 %	Non-Coding
12	NC_017345	CCA	2	6	638	643	33.33 %	0 %	0 %	66.67 %	Non-Coding
13	NC_017345	GTG	2	6	670	675	0 %	33.33 %	66.67 %	0 %	Non-Coding
14	NC_017345	CAT	2	6	820	825	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
15	NC_017345	CGT	2	6	1035	1040	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
16	NC_017345	TAA	2	6	1303	1308	66.67 %	33.33 %	0 %	0 %	Non-Coding
17	NC_017345	TCA	2	6	1368	1373	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
18	NC_017345	AAC	2	6	1375	1380	66.67 %	0 %	0 %	33.33 %	Non-Coding
19	NC_017345	ACC	2	6	1415	1420	33.33 %	0 %	0 %	66.67 %	Non-Coding
20	NC_017345	GGT	2	6	1447	1452	0 %	33.33 %	66.67 %	0 %	Non-Coding
21	NC_017345	TTC	3	9	1486	1494	0 %	66.67 %	0 %	33.33 %	Non-Coding
22	NC_017345	ATA	2	6	1543	1548	66.67 %	33.33 %	0 %	0 %	Non-Coding
23	NC_017345	ATA	2	6	1631	1636	66.67 %	33.33 %	0 %	0 %	Non-Coding
24	NC_017345	TAT	2	6	2344	2349	33.33 %	66.67 %	0 %	0 %	Non-Coding
25	NC_017345	TGA	2	6	3267	3272	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
26	NC_017345	TAT	2	6	3427	3432	33.33 %	66.67 %	0 %	0 %	Non-Coding
27	NC_017345	GAA	2	6	4015	4020	66.67 %	0 %	33.33 %	0 %	Non-Coding
28	NC_017345	CAT	2	6	4231	4236	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
29	NC_017345	TAT	2	6	5622	5627	33.33 %	66.67 %	0 %	0 %	Non-Coding
30	NC_017345	AAT	2	6	5642	5647	66.67 %	33.33 %	0 %	0 %	Non-Coding
31	NC_017345	TTC	2	6	5777	5782	0 %	66.67 %	0 %	33.33 %	Non-Coding
32	NC_017345	CGT	2	6	6753	6758	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
33	NC_017345	GAT	2	6	6776	6781	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
34	NC_017345	TAA	2	6	7844	7849	66.67 %	33.33 %	0 %	0 %	Non-Coding
35	NC_017345	ATT	2	6	7905	7910	33.33 %	66.67 %	0 %	0 %	Non-Coding
36	NC_017345	TTA	2	6	7964	7969	33.33 %	66.67 %	0 %	0 %	Non-Coding
37	NC_017345	AGT	2	6	7989	7994	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
38	NC_017345	TAT	2	6	8018	8023	33.33 %	66.67 %	0 %	0 %	Non-Coding
39	NC_017345	ATC	2	6	8092	8097	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
40	NC_017345	TAT	2	6	8160	8165	33.33 %	66.67 %	0 %	0 %	Non-Coding
41	NC_017345	TGA	2	6	8223	8228	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
42	NC_017345	AAT	2	6	8517	8522	66.67 %	33.33 %	0 %	0 %	Non-Coding
43	NC_017345	GTC	2	6	8542	8547	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
44	NC_017345	ACA	2	6	8553	8558	66.67 %	0 %	0 %	33.33 %	Non-Coding
45	NC_017345	AAT	2	6	8973	8978	66.67 %	33.33 %	0 %	0 %	Non-Coding
46	NC_017345	ATC	2	6	9039	9044	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
47	NC_017345	TAA	2	6	9057	9062	66.67 %	33.33 %	0 %	0 %	Non-Coding
48	NC_017345	AGG	2	6	9064	9069	33.33 %	0 %	66.67 %	0 %	Non-Coding
49	NC_017345	TAT	2	6	9072	9077	33.33 %	66.67 %	0 %	0 %	Non-Coding
50	NC_017345	ATT	2	6	9274	9279	33.33 %	66.67 %	0 %	0 %	Non-Coding
51	NC_017345	CAA	2	6	9287	9292	66.67 %	0 %	0 %	33.33 %	Non-Coding
52	NC_017345	CTT	2	6	9366	9371	0 %	66.67 %	0 %	33.33 %	Non-Coding
53	NC_017345	CTT	2	6	9390	9395	0 %	66.67 %	0 %	33.33 %	Non-Coding
54	NC_017345	CAT	2	6	9412	9417	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
55	NC_017345	GTC	2	6	9515	9520	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
56	NC_017345	CAT	2	6	9584	9589	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
57	NC_017345	ACA	2	6	9591	9596	66.67 %	0 %	0 %	33.33 %	Non-Coding
58	NC_017345	GAC	2	6	9664	9669	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
59	NC_017345	CTA	2	6	10252	10257	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
60	NC_017345	ACT	2	6	10260	10265	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
61	NC_017345	TAA	2	6	10266	10271	66.67 %	33.33 %	0 %	0 %	Non-Coding
62	NC_017345	TAT	2	6	10277	10282	33.33 %	66.67 %	0 %	0 %	Non-Coding
63	NC_017345	AAT	2	6	13720	13725	66.67 %	33.33 %	0 %	0 %	Non-Coding
64	NC_017345	ACC	2	6	13799	13804	33.33 %	0 %	0 %	66.67 %	Non-Coding
65	NC_017345	TAT	2	6	14019	14024	33.33 %	66.67 %	0 %	0 %	Non-Coding
66	NC_017345	ATA	2	6	14034	14039	66.67 %	33.33 %	0 %	0 %	Non-Coding
67	NC_017345	ATT	2	6	14819	14824	33.33 %	66.67 %	0 %	0 %	Non-Coding
68	NC_017345	TGA	2	6	14884	14889	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
69	NC_017345	TAT	2	6	14914	14919	33.33 %	66.67 %	0 %	0 %	Non-Coding
70	NC_017345	ATA	2	6	14986	14991	66.67 %	33.33 %	0 %	0 %	Non-Coding
71	NC_017345	ATA	2	6	15035	15040	66.67 %	33.33 %	0 %	0 %	Non-Coding
72	NC_017345	ATA	2	6	15047	15052	66.67 %	33.33 %	0 %	0 %	Non-Coding
73	NC_017345	AAT	2	6	15982	15987	66.67 %	33.33 %	0 %	0 %	Non-Coding
74	NC_017345	TAT	2	6	16018	16023	33.33 %	66.67 %	0 %	0 %	Non-Coding
75	NC_017345	AAG	2	6	16034	16039	66.67 %	0 %	33.33 %	0 %	Non-Coding
76	NC_017345	ATA	2	6	18195	18200	66.67 %	33.33 %	0 %	0 %	Non-Coding
77	NC_017345	TTA	2	6	18224	18229	33.33 %	66.67 %	0 %	0 %	Non-Coding
78	NC_017345	TAA	2	6	18242	18247	66.67 %	33.33 %	0 %	0 %	Non-Coding
79	NC_017345	CTT	2	6	18307	18312	0 %	66.67 %	0 %	33.33 %	Non-Coding
80	NC_017345	CAA	2	6	18361	18366	66.67 %	0 %	0 %	33.33 %	Non-Coding
81	NC_017345	TTA	2	6	21299	21304	33.33 %	66.67 %	0 %	0 %	Non-Coding
82	NC_017345	TAA	2	6	22490	22495	66.67 %	33.33 %	0 %	0 %	Non-Coding
83	NC_017345	CTA	2	6	23182	23187	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
84	NC_017345	AGT	2	6	23253	23258	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
85	NC_017345	TTG	2	6	23305	23310	0 %	66.67 %	33.33 %	0 %	Non-Coding
86	NC_017345	TGA	2	6	23354	23359	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
87	NC_017345	ATG	2	6	23368	23373	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
88	NC_017345	CCT	2	6	23403	23408	0 %	33.33 %	0 %	66.67 %	Non-Coding
89	NC_017345	TCG	2	6	23413	23418	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
90	NC_017345	TAT	3	9	23445	23453	33.33 %	66.67 %	0 %	0 %	Non-Coding
91	NC_017345	GTC	2	6	23492	23497	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
92	NC_017345	AGA	2	6	23538	23543	66.67 %	0 %	33.33 %	0 %	Non-Coding
93	NC_017345	ATC	2	6	23557	23562	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
94	NC_017345	TAA	2	6	23596	23601	66.67 %	33.33 %	0 %	0 %	Non-Coding
95	NC_017345	ATT	2	6	23735	23740	33.33 %	66.67 %	0 %	0 %	Non-Coding
96	NC_017345	ATC	2	6	23762	23767	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
97	NC_017345	TAC	2	6	23789	23794	33.33 %	33.33 %	0 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.