MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Staphylococcus aureus subsp. aureus JKD6159 plasmid pSaa6159

Total Repeats: 87

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_017339	TAC	3	9	390	398	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
2	NC_017339	AGA	2	6	457	462	66.67 %	0 %	33.33 %	0 %	Non-Coding
3	NC_017339	AGC	2	6	503	508	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
4	NC_017339	AAG	2	6	539	544	66.67 %	0 %	33.33 %	0 %	Non-Coding
5	NC_017339	GAA	2	6	708	713	66.67 %	0 %	33.33 %	0 %	Non-Coding
6	NC_017339	ATC	2	6	822	827	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
7	NC_017339	TGG	2	6	914	919	0 %	33.33 %	66.67 %	0 %	Non-Coding
8	NC_017339	TGA	2	6	989	994	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
9	NC_017339	GAA	3	9	1011	1019	66.67 %	0 %	33.33 %	0 %	Non-Coding
10	NC_017339	ATT	3	9	1056	1064	33.33 %	66.67 %	0 %	0 %	Non-Coding
11	NC_017339	AGA	2	6	1341	1346	66.67 %	0 %	33.33 %	0 %	Non-Coding
12	NC_017339	TCG	2	6	1629	1634	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
13	NC_017339	GTA	2	6	1687	1692	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
14	NC_017339	CGA	2	6	1771	1776	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
15	NC_017339	ACG	2	6	1852	1857	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
16	NC_017339	TAA	2	6	1968	1973	66.67 %	33.33 %	0 %	0 %	Non-Coding
17	NC_017339	GAA	2	6	2094	2099	66.67 %	0 %	33.33 %	0 %	Non-Coding
18	NC_017339	ATT	2	6	2229	2234	33.33 %	66.67 %	0 %	0 %	Non-Coding
19	NC_017339	TCT	2	6	3287	3292	0 %	66.67 %	0 %	33.33 %	Non-Coding
20	NC_017339	GAC	2	6	3331	3336	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
21	NC_017339	GAT	2	6	3370	3375	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
22	NC_017339	ATA	2	6	3376	3381	66.67 %	33.33 %	0 %	0 %	Non-Coding
23	NC_017339	CAT	2	6	3458	3463	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
24	NC_017339	TCA	2	6	3472	3477	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
25	NC_017339	TAT	2	6	3495	3500	33.33 %	66.67 %	0 %	0 %	Non-Coding
26	NC_017339	CAA	2	6	3521	3526	66.67 %	0 %	0 %	33.33 %	Non-Coding
27	NC_017339	AGT	2	6	3581	3586	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
28	NC_017339	TAG	2	6	3644	3649	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
29	NC_017339	ATA	2	6	3664	3669	66.67 %	33.33 %	0 %	0 %	Non-Coding
30	NC_017339	AGT	2	6	3675	3680	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
31	NC_017339	TTG	2	6	4747	4752	0 %	66.67 %	33.33 %	0 %	Non-Coding
32	NC_017339	TAA	2	6	4786	4791	66.67 %	33.33 %	0 %	0 %	Non-Coding
33	NC_017339	TCT	2	6	5773	5778	0 %	66.67 %	0 %	33.33 %	Non-Coding
34	NC_017339	CAA	2	6	6013	6018	66.67 %	0 %	0 %	33.33 %	Non-Coding
35	NC_017339	TAA	2	6	6019	6024	66.67 %	33.33 %	0 %	0 %	Non-Coding
36	NC_017339	GTT	2	6	6030	6035	0 %	66.67 %	33.33 %	0 %	Non-Coding
37	NC_017339	TTC	2	6	6154	6159	0 %	66.67 %	0 %	33.33 %	Non-Coding
38	NC_017339	TTA	2	6	6174	6179	33.33 %	66.67 %	0 %	0 %	Non-Coding
39	NC_017339	ATT	2	6	6196	6201	33.33 %	66.67 %	0 %	0 %	Non-Coding
40	NC_017339	GTT	2	6	6219	6224	0 %	66.67 %	33.33 %	0 %	Non-Coding
41	NC_017339	ATG	2	6	6340	6345	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
42	NC_017339	CCT	2	6	7661	7666	0 %	33.33 %	0 %	66.67 %	Non-Coding
43	NC_017339	AGA	2	6	7780	7785	66.67 %	0 %	33.33 %	0 %	Non-Coding
44	NC_017339	TAA	2	6	7825	7830	66.67 %	33.33 %	0 %	0 %	Non-Coding
45	NC_017339	TAA	2	6	7862	7867	66.67 %	33.33 %	0 %	0 %	Non-Coding
46	NC_017339	TAT	2	6	7891	7896	33.33 %	66.67 %	0 %	0 %	Non-Coding
47	NC_017339	ATT	2	6	10104	10109	33.33 %	66.67 %	0 %	0 %	Non-Coding
48	NC_017339	ATA	2	6	11008	11013	66.67 %	33.33 %	0 %	0 %	Non-Coding
49	NC_017339	TAT	2	6	11039	11044	33.33 %	66.67 %	0 %	0 %	Non-Coding
50	NC_017339	TAT	2	6	11051	11056	33.33 %	66.67 %	0 %	0 %	Non-Coding
51	NC_017339	TAT	2	6	11100	11105	33.33 %	66.67 %	0 %	0 %	Non-Coding
52	NC_017339	TCA	2	6	11202	11207	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
53	NC_017339	AAT	2	6	11267	11272	66.67 %	33.33 %	0 %	0 %	Non-Coding
54	NC_017339	TTG	2	6	11300	11305	0 %	66.67 %	33.33 %	0 %	Non-Coding
55	NC_017339	GAT	2	6	12022	12027	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
56	NC_017339	TAT	2	6	12035	12040	33.33 %	66.67 %	0 %	0 %	Non-Coding
57	NC_017339	TAA	3	9	12048	12056	66.67 %	33.33 %	0 %	0 %	Non-Coding
58	NC_017339	ATG	2	6	12122	12127	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
59	NC_017339	ATT	2	6	12146	12151	33.33 %	66.67 %	0 %	0 %	Non-Coding
60	NC_017339	GTT	2	6	12222	12227	0 %	66.67 %	33.33 %	0 %	Non-Coding
61	NC_017339	ATA	2	6	12248	12253	66.67 %	33.33 %	0 %	0 %	Non-Coding
62	NC_017339	ATT	2	6	12313	12318	33.33 %	66.67 %	0 %	0 %	Non-Coding
63	NC_017339	TAA	2	6	12352	12357	66.67 %	33.33 %	0 %	0 %	Non-Coding
64	NC_017339	ATG	2	6	15750	15755	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
65	NC_017339	TAA	2	6	15807	15812	66.67 %	33.33 %	0 %	0 %	Non-Coding
66	NC_017339	GAA	3	9	16212	16220	66.67 %	0 %	33.33 %	0 %	Non-Coding
67	NC_017339	AAG	2	6	16327	16332	66.67 %	0 %	33.33 %	0 %	Non-Coding
68	NC_017339	TAA	2	6	16340	16345	66.67 %	33.33 %	0 %	0 %	Non-Coding
69	NC_017339	TAA	2	6	16388	16393	66.67 %	33.33 %	0 %	0 %	Non-Coding
70	NC_017339	ATT	2	6	16522	16527	33.33 %	66.67 %	0 %	0 %	Non-Coding
71	NC_017339	ATT	2	6	17181	17186	33.33 %	66.67 %	0 %	0 %	Non-Coding
72	NC_017339	TAA	2	6	17512	17517	66.67 %	33.33 %	0 %	0 %	Non-Coding
73	NC_017339	ATT	2	6	18441	18446	33.33 %	66.67 %	0 %	0 %	Non-Coding
74	NC_017339	AGA	2	6	18904	18909	66.67 %	0 %	33.33 %	0 %	Non-Coding
75	NC_017339	TAT	2	6	19032	19037	33.33 %	66.67 %	0 %	0 %	Non-Coding
76	NC_017339	TAA	2	6	19059	19064	66.67 %	33.33 %	0 %	0 %	Non-Coding
77	NC_017339	ATG	2	6	19104	19109	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
78	NC_017339	CCT	2	6	19138	19143	0 %	33.33 %	0 %	66.67 %	Non-Coding
79	NC_017339	GAC	2	6	19173	19178	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
80	NC_017339	TAA	2	6	19225	19230	66.67 %	33.33 %	0 %	0 %	Non-Coding
81	NC_017339	TGT	2	6	19232	19237	0 %	66.67 %	33.33 %	0 %	Non-Coding
82	NC_017339	GAT	2	6	19607	19612	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
83	NC_017339	ATC	2	6	20426	20431	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
84	NC_017339	TAA	3	9	20488	20496	66.67 %	33.33 %	0 %	0 %	Non-Coding
85	NC_017339	TAA	2	6	20622	20627	66.67 %	33.33 %	0 %	0 %	Non-Coding
86	NC_017339	ACT	2	6	20650	20655	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
87	NC_017339	TAA	2	6	20675	20680	66.67 %	33.33 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.