Penta-nucleotide Repeats of Shigella flexneri 2002017 plasmid pSFxv_1
Total Repeats: 163
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_017319 | CATTG | 2 | 10 | 3540 | 3549 | 20 % | 40 % | 20 % | 20 % | 384545971 |
2 | NC_017319 | AAATT | 2 | 10 | 3736 | 3745 | 60 % | 40 % | 0 % | 0 % | 384545971 |
3 | NC_017319 | CAGAG | 2 | 10 | 5176 | 5185 | 40 % | 0 % | 40 % | 20 % | Non-Coding |
4 | NC_017319 | ACATC | 2 | 10 | 5493 | 5502 | 40 % | 20 % | 0 % | 40 % | 384545973 |
5 | NC_017319 | AGGTG | 2 | 10 | 6061 | 6070 | 20 % | 20 % | 60 % | 0 % | 384545974 |
6 | NC_017319 | CAGAC | 2 | 10 | 6341 | 6350 | 40 % | 0 % | 20 % | 40 % | 384545975 |
7 | NC_017319 | TGCAA | 2 | 10 | 7961 | 7970 | 40 % | 20 % | 20 % | 20 % | 384545977 |
8 | NC_017319 | CTGAT | 2 | 10 | 9813 | 9822 | 20 % | 40 % | 20 % | 20 % | 384545978 |
9 | NC_017319 | ATGTA | 2 | 10 | 10371 | 10380 | 40 % | 40 % | 20 % | 0 % | Non-Coding |
10 | NC_017319 | CCATT | 2 | 10 | 12164 | 12173 | 20 % | 40 % | 0 % | 40 % | 384545982 |
11 | NC_017319 | GTCTG | 2 | 10 | 13511 | 13520 | 0 % | 40 % | 40 % | 20 % | Non-Coding |
12 | NC_017319 | GGCAA | 2 | 10 | 15088 | 15097 | 40 % | 0 % | 40 % | 20 % | 384545986 |
13 | NC_017319 | CTGTG | 2 | 10 | 15553 | 15562 | 0 % | 40 % | 40 % | 20 % | 384545987 |
14 | NC_017319 | GAACG | 2 | 10 | 15979 | 15988 | 40 % | 0 % | 40 % | 20 % | Non-Coding |
15 | NC_017319 | GATGT | 2 | 10 | 16451 | 16460 | 20 % | 40 % | 40 % | 0 % | 384545989 |
16 | NC_017319 | ACCGG | 2 | 10 | 16926 | 16935 | 20 % | 0 % | 40 % | 40 % | 384545989 |
17 | NC_017319 | TGGTG | 2 | 10 | 17375 | 17384 | 0 % | 40 % | 60 % | 0 % | 384545990 |
18 | NC_017319 | ATGAA | 2 | 10 | 17598 | 17607 | 60 % | 20 % | 20 % | 0 % | Non-Coding |
19 | NC_017319 | ATTAC | 2 | 10 | 18843 | 18852 | 40 % | 40 % | 0 % | 20 % | Non-Coding |
20 | NC_017319 | TAACG | 2 | 10 | 21530 | 21539 | 40 % | 20 % | 20 % | 20 % | Non-Coding |
21 | NC_017319 | CGAGT | 2 | 10 | 21632 | 21641 | 20 % | 20 % | 40 % | 20 % | Non-Coding |
22 | NC_017319 | GTTCG | 2 | 10 | 23455 | 23464 | 0 % | 40 % | 40 % | 20 % | 384545998 |
23 | NC_017319 | TGTTT | 2 | 10 | 24254 | 24263 | 0 % | 80 % | 20 % | 0 % | Non-Coding |
24 | NC_017319 | CCCAG | 2 | 10 | 24484 | 24493 | 20 % | 0 % | 20 % | 60 % | Non-Coding |
25 | NC_017319 | AAGGT | 2 | 10 | 25114 | 25123 | 40 % | 20 % | 40 % | 0 % | 384545999 |
26 | NC_017319 | AGCGC | 2 | 10 | 25514 | 25523 | 20 % | 0 % | 40 % | 40 % | 384546000 |
27 | NC_017319 | TCAAA | 2 | 10 | 26152 | 26161 | 60 % | 20 % | 0 % | 20 % | 384546000 |
28 | NC_017319 | ACCGC | 2 | 10 | 27470 | 27479 | 20 % | 0 % | 20 % | 60 % | 384546003 |
29 | NC_017319 | TTATG | 2 | 10 | 27553 | 27562 | 20 % | 60 % | 20 % | 0 % | 384546003 |
30 | NC_017319 | ACAAA | 2 | 10 | 27631 | 27640 | 80 % | 0 % | 0 % | 20 % | 384546003 |
31 | NC_017319 | TTCCA | 2 | 10 | 27794 | 27803 | 20 % | 40 % | 0 % | 40 % | 384546003 |
32 | NC_017319 | CGAGT | 2 | 10 | 30080 | 30089 | 20 % | 20 % | 40 % | 20 % | Non-Coding |
33 | NC_017319 | CAAAT | 2 | 10 | 30763 | 30772 | 60 % | 20 % | 0 % | 20 % | 384546008 |
34 | NC_017319 | CCTCT | 2 | 10 | 33569 | 33578 | 0 % | 40 % | 0 % | 60 % | 384546014 |
35 | NC_017319 | AGCGC | 2 | 10 | 36133 | 36142 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
36 | NC_017319 | ATGTC | 2 | 10 | 37727 | 37736 | 20 % | 40 % | 20 % | 20 % | Non-Coding |
37 | NC_017319 | GTGAT | 2 | 10 | 38999 | 39008 | 20 % | 40 % | 40 % | 0 % | 384546024 |
38 | NC_017319 | AGCGA | 2 | 10 | 40261 | 40270 | 40 % | 0 % | 40 % | 20 % | 384546025 |
39 | NC_017319 | CCTGA | 2 | 10 | 40942 | 40951 | 20 % | 20 % | 20 % | 40 % | Non-Coding |
40 | NC_017319 | GCTCT | 2 | 10 | 42386 | 42395 | 0 % | 40 % | 20 % | 40 % | 384546026 |
41 | NC_017319 | CATTG | 2 | 10 | 47809 | 47818 | 20 % | 40 % | 20 % | 20 % | 384546036 |
42 | NC_017319 | AAATT | 2 | 10 | 48005 | 48014 | 60 % | 40 % | 0 % | 0 % | 384546036 |
43 | NC_017319 | GTGAT | 2 | 10 | 49880 | 49889 | 20 % | 40 % | 40 % | 0 % | 384546038 |
44 | NC_017319 | CTCTT | 2 | 10 | 57037 | 57046 | 0 % | 60 % | 0 % | 40 % | Non-Coding |
45 | NC_017319 | GCTCT | 2 | 10 | 63368 | 63377 | 0 % | 40 % | 20 % | 40 % | 384546053 |
46 | NC_017319 | GCTCT | 2 | 10 | 65559 | 65568 | 0 % | 40 % | 20 % | 40 % | 384546054 |
47 | NC_017319 | CGTTA | 2 | 10 | 68664 | 68673 | 20 % | 40 % | 20 % | 20 % | 384546058 |
48 | NC_017319 | AGCGC | 2 | 10 | 72278 | 72287 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
49 | NC_017319 | TCAAA | 2 | 10 | 72916 | 72925 | 60 % | 20 % | 0 % | 20 % | 384546065 |
50 | NC_017319 | CAGAC | 2 | 10 | 75168 | 75177 | 40 % | 0 % | 20 % | 40 % | Non-Coding |
51 | NC_017319 | AAGTT | 2 | 10 | 75570 | 75579 | 40 % | 40 % | 20 % | 0 % | 384546070 |
52 | NC_017319 | TCATT | 2 | 10 | 76534 | 76543 | 20 % | 60 % | 0 % | 20 % | 384546070 |
53 | NC_017319 | CGTTC | 2 | 10 | 79461 | 79470 | 0 % | 40 % | 20 % | 40 % | Non-Coding |
54 | NC_017319 | ACAAG | 2 | 10 | 79630 | 79639 | 60 % | 0 % | 20 % | 20 % | Non-Coding |
55 | NC_017319 | TTTAT | 2 | 10 | 81119 | 81128 | 20 % | 80 % | 0 % | 0 % | 384546077 |
56 | NC_017319 | AGTGG | 2 | 10 | 82438 | 82447 | 20 % | 20 % | 60 % | 0 % | 384546079 |
57 | NC_017319 | GTCAG | 2 | 10 | 82926 | 82935 | 20 % | 20 % | 40 % | 20 % | Non-Coding |
58 | NC_017319 | TCGCT | 2 | 10 | 83608 | 83617 | 0 % | 40 % | 20 % | 40 % | 384546080 |
59 | NC_017319 | CACAA | 2 | 10 | 84374 | 84383 | 60 % | 0 % | 0 % | 40 % | 384546081 |
60 | NC_017319 | TCCTT | 2 | 10 | 85511 | 85520 | 0 % | 60 % | 0 % | 40 % | 384546083 |
61 | NC_017319 | CCACT | 2 | 10 | 85990 | 85999 | 20 % | 20 % | 0 % | 60 % | 384546084 |
62 | NC_017319 | CAGTG | 2 | 10 | 86096 | 86105 | 20 % | 20 % | 40 % | 20 % | 384546084 |
63 | NC_017319 | CAGAC | 2 | 10 | 87246 | 87255 | 40 % | 0 % | 20 % | 40 % | 384546086 |
64 | NC_017319 | TAAGC | 2 | 10 | 89665 | 89674 | 40 % | 20 % | 20 % | 20 % | Non-Coding |
65 | NC_017319 | GTCTG | 2 | 10 | 90683 | 90692 | 0 % | 40 % | 40 % | 20 % | Non-Coding |
66 | NC_017319 | TTCCC | 2 | 10 | 92481 | 92490 | 0 % | 40 % | 0 % | 60 % | 384546092 |
67 | NC_017319 | CTGGT | 2 | 10 | 92881 | 92890 | 0 % | 40 % | 40 % | 20 % | 384546093 |
68 | NC_017319 | AATTT | 2 | 10 | 95132 | 95141 | 40 % | 60 % | 0 % | 0 % | 384546094 |
69 | NC_017319 | CAATG | 2 | 10 | 95328 | 95337 | 40 % | 20 % | 20 % | 20 % | 384546094 |
70 | NC_017319 | GTCTG | 2 | 10 | 96571 | 96580 | 0 % | 40 % | 40 % | 20 % | 384546096 |
71 | NC_017319 | AGCGA | 2 | 10 | 99585 | 99594 | 40 % | 0 % | 40 % | 20 % | 384546100 |
72 | NC_017319 | CCTGA | 2 | 10 | 100266 | 100275 | 20 % | 20 % | 20 % | 40 % | Non-Coding |
73 | NC_017319 | ACCTT | 2 | 10 | 100679 | 100688 | 20 % | 40 % | 0 % | 40 % | 384546101 |
74 | NC_017319 | CGAAC | 2 | 10 | 101028 | 101037 | 40 % | 0 % | 20 % | 40 % | 384546101 |
75 | NC_017319 | GTTAT | 2 | 10 | 102777 | 102786 | 20 % | 60 % | 20 % | 0 % | 384546102 |
76 | NC_017319 | TGGGG | 2 | 10 | 103546 | 103555 | 0 % | 20 % | 80 % | 0 % | Non-Coding |
77 | NC_017319 | TTTTA | 2 | 10 | 103750 | 103759 | 20 % | 80 % | 0 % | 0 % | Non-Coding |
78 | NC_017319 | TTTAT | 2 | 10 | 103785 | 103794 | 20 % | 80 % | 0 % | 0 % | Non-Coding |
79 | NC_017319 | TGTTT | 2 | 10 | 104518 | 104527 | 0 % | 80 % | 20 % | 0 % | 384546103 |
80 | NC_017319 | TCTTT | 2 | 10 | 104570 | 104579 | 0 % | 80 % | 0 % | 20 % | 384546103 |
81 | NC_017319 | AAGTT | 2 | 10 | 104816 | 104825 | 40 % | 40 % | 20 % | 0 % | 384546103 |
82 | NC_017319 | ATGCT | 2 | 10 | 104984 | 104993 | 20 % | 40 % | 20 % | 20 % | 384546103 |
83 | NC_017319 | TGTTT | 2 | 10 | 109060 | 109069 | 0 % | 80 % | 20 % | 0 % | 384546107 |
84 | NC_017319 | GGTGA | 2 | 10 | 109239 | 109248 | 20 % | 20 % | 60 % | 0 % | 384546107 |
85 | NC_017319 | ATTTT | 2 | 10 | 111181 | 111190 | 20 % | 80 % | 0 % | 0 % | 384546108 |
86 | NC_017319 | TTTTA | 2 | 10 | 111198 | 111207 | 20 % | 80 % | 0 % | 0 % | 384546108 |
87 | NC_017319 | CTTTA | 2 | 10 | 112146 | 112155 | 20 % | 60 % | 0 % | 20 % | Non-Coding |
88 | NC_017319 | TTTCA | 2 | 10 | 115056 | 115065 | 20 % | 60 % | 0 % | 20 % | 384546113 |
89 | NC_017319 | CTTCT | 2 | 10 | 115860 | 115869 | 0 % | 60 % | 0 % | 40 % | 384546113 |
90 | NC_017319 | GAGAG | 2 | 10 | 115893 | 115902 | 40 % | 0 % | 60 % | 0 % | 384546113 |
91 | NC_017319 | ATATT | 2 | 10 | 116950 | 116959 | 40 % | 60 % | 0 % | 0 % | 384546114 |
92 | NC_017319 | TTTTA | 2 | 10 | 119183 | 119192 | 20 % | 80 % | 0 % | 0 % | 384546119 |
93 | NC_017319 | TTGAT | 2 | 10 | 119374 | 119383 | 20 % | 60 % | 20 % | 0 % | 384546119 |
94 | NC_017319 | TTAAA | 2 | 10 | 121836 | 121845 | 60 % | 40 % | 0 % | 0 % | 384546123 |
95 | NC_017319 | ATTGT | 2 | 10 | 121864 | 121873 | 20 % | 60 % | 20 % | 0 % | 384546123 |
96 | NC_017319 | ATTGT | 2 | 10 | 122649 | 122658 | 20 % | 60 % | 20 % | 0 % | 384546125 |
97 | NC_017319 | TGGCT | 2 | 10 | 124442 | 124451 | 0 % | 40 % | 40 % | 20 % | 384546126 |
98 | NC_017319 | TTGTT | 2 | 10 | 126646 | 126655 | 0 % | 80 % | 20 % | 0 % | 384546127 |
99 | NC_017319 | GTTAT | 2 | 10 | 127638 | 127647 | 20 % | 60 % | 20 % | 0 % | 384546128 |
100 | NC_017319 | ATGGT | 2 | 10 | 132217 | 132226 | 20 % | 40 % | 40 % | 0 % | 384546134 |
101 | NC_017319 | CAGAC | 2 | 10 | 135061 | 135070 | 40 % | 0 % | 20 % | 40 % | 384546138 |
102 | NC_017319 | TATCA | 2 | 10 | 140354 | 140363 | 40 % | 40 % | 0 % | 20 % | Non-Coding |
103 | NC_017319 | AAACA | 2 | 10 | 140666 | 140675 | 80 % | 0 % | 0 % | 20 % | Non-Coding |
104 | NC_017319 | TTCAT | 2 | 10 | 144398 | 144407 | 20 % | 60 % | 0 % | 20 % | Non-Coding |
105 | NC_017319 | AATAT | 2 | 10 | 146561 | 146570 | 60 % | 40 % | 0 % | 0 % | Non-Coding |
106 | NC_017319 | ATGGA | 2 | 10 | 148562 | 148571 | 40 % | 20 % | 40 % | 0 % | 384546164 |
107 | NC_017319 | TCAGC | 2 | 10 | 150747 | 150756 | 20 % | 20 % | 20 % | 40 % | 384546164 |
108 | NC_017319 | CTGAA | 2 | 10 | 152189 | 152198 | 40 % | 20 % | 20 % | 20 % | 384546166 |
109 | NC_017319 | TTTCC | 2 | 10 | 154201 | 154210 | 0 % | 60 % | 0 % | 40 % | 384546169 |
110 | NC_017319 | GTGGC | 2 | 10 | 158020 | 158029 | 0 % | 20 % | 60 % | 20 % | 384546174 |
111 | NC_017319 | ACAGT | 2 | 10 | 159624 | 159633 | 40 % | 20 % | 20 % | 20 % | 384546177 |
112 | NC_017319 | GCTTT | 2 | 10 | 159662 | 159671 | 0 % | 60 % | 20 % | 20 % | 384546177 |
113 | NC_017319 | AATAA | 2 | 10 | 160804 | 160813 | 80 % | 20 % | 0 % | 0 % | 384546179 |
114 | NC_017319 | CATTA | 2 | 10 | 161035 | 161044 | 40 % | 40 % | 0 % | 20 % | 384546179 |
115 | NC_017319 | GCCAG | 2 | 10 | 161424 | 161433 | 20 % | 0 % | 40 % | 40 % | 384546179 |
116 | NC_017319 | CGCGG | 2 | 10 | 162903 | 162912 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
117 | NC_017319 | ACGGG | 2 | 10 | 162954 | 162963 | 20 % | 0 % | 60 % | 20 % | Non-Coding |
118 | NC_017319 | CCGCC | 2 | 10 | 165251 | 165260 | 0 % | 0 % | 20 % | 80 % | 384546186 |
119 | NC_017319 | CAGAC | 2 | 10 | 167759 | 167768 | 40 % | 0 % | 20 % | 40 % | 384546189 |
120 | NC_017319 | TTCCC | 2 | 10 | 169404 | 169413 | 0 % | 40 % | 0 % | 60 % | 384546192 |
121 | NC_017319 | CTGGT | 2 | 10 | 169804 | 169813 | 0 % | 40 % | 40 % | 20 % | 384546193 |
122 | NC_017319 | CAGCC | 2 | 10 | 172015 | 172024 | 20 % | 0 % | 20 % | 60 % | 384546195 |
123 | NC_017319 | GCACT | 2 | 10 | 173037 | 173046 | 20 % | 20 % | 20 % | 40 % | 384546197 |
124 | NC_017319 | AGTGG | 2 | 10 | 173144 | 173153 | 20 % | 20 % | 60 % | 0 % | 384546197 |
125 | NC_017319 | GACCA | 2 | 10 | 173862 | 173871 | 40 % | 0 % | 20 % | 40 % | 384546198 |
126 | NC_017319 | GGGAA | 2 | 10 | 174283 | 174292 | 40 % | 0 % | 60 % | 0 % | 384546199 |
127 | NC_017319 | ATAAA | 2 | 10 | 178104 | 178113 | 80 % | 20 % | 0 % | 0 % | 384546206 |
128 | NC_017319 | ATCAC | 2 | 10 | 178619 | 178628 | 40 % | 20 % | 0 % | 40 % | 384546207 |
129 | NC_017319 | CATCA | 2 | 10 | 179367 | 179376 | 40 % | 20 % | 0 % | 40 % | 384546209 |
130 | NC_017319 | GCCAG | 2 | 10 | 180013 | 180022 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
131 | NC_017319 | GCCCG | 2 | 10 | 180212 | 180221 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
132 | NC_017319 | TTCAT | 2 | 10 | 181300 | 181309 | 20 % | 60 % | 0 % | 20 % | Non-Coding |
133 | NC_017319 | GCTCT | 2 | 10 | 182489 | 182498 | 0 % | 40 % | 20 % | 40 % | 384546213 |
134 | NC_017319 | CAGGA | 2 | 10 | 183532 | 183541 | 40 % | 0 % | 40 % | 20 % | Non-Coding |
135 | NC_017319 | GGCAG | 2 | 10 | 183626 | 183635 | 20 % | 0 % | 60 % | 20 % | 384546215 |
136 | NC_017319 | TGAGT | 2 | 10 | 184143 | 184152 | 20 % | 40 % | 40 % | 0 % | 384546216 |
137 | NC_017319 | GTCTG | 2 | 10 | 184619 | 184628 | 0 % | 40 % | 40 % | 20 % | Non-Coding |
138 | NC_017319 | TTGCC | 2 | 10 | 185149 | 185158 | 0 % | 40 % | 20 % | 40 % | 384546219 |
139 | NC_017319 | ACGCC | 2 | 10 | 185397 | 185406 | 20 % | 0 % | 20 % | 60 % | 384546219 |
140 | NC_017319 | CAGTG | 2 | 10 | 189907 | 189916 | 20 % | 20 % | 40 % | 20 % | 384546225 |
141 | NC_017319 | GGTGG | 2 | 10 | 191226 | 191235 | 0 % | 20 % | 80 % | 0 % | Non-Coding |
142 | NC_017319 | TCTGG | 2 | 10 | 192078 | 192087 | 0 % | 40 % | 40 % | 20 % | 384546226 |
143 | NC_017319 | AGTTC | 2 | 10 | 192133 | 192142 | 20 % | 40 % | 20 % | 20 % | 384546226 |
144 | NC_017319 | TGGTA | 2 | 10 | 193303 | 193312 | 20 % | 40 % | 40 % | 0 % | 384546227 |
145 | NC_017319 | ATTTA | 2 | 10 | 195652 | 195661 | 40 % | 60 % | 0 % | 0 % | Non-Coding |
146 | NC_017319 | GACCT | 2 | 10 | 198992 | 199001 | 20 % | 20 % | 20 % | 40 % | 384546236 |
147 | NC_017319 | CACTG | 2 | 10 | 200978 | 200987 | 20 % | 20 % | 20 % | 40 % | 384546238 |
148 | NC_017319 | ACCGG | 2 | 10 | 203102 | 203111 | 20 % | 0 % | 40 % | 40 % | 384546238 |
149 | NC_017319 | GCCGT | 2 | 10 | 203173 | 203182 | 0 % | 20 % | 40 % | 40 % | 384546238 |
150 | NC_017319 | ACCTG | 2 | 10 | 203711 | 203720 | 20 % | 20 % | 20 % | 40 % | 384546238 |
151 | NC_017319 | TCTGG | 2 | 10 | 204054 | 204063 | 0 % | 40 % | 40 % | 20 % | 384546239 |
152 | NC_017319 | CAGAC | 2 | 10 | 206445 | 206454 | 40 % | 0 % | 20 % | 40 % | 384546243 |
153 | NC_017319 | CCGGG | 2 | 10 | 207512 | 207521 | 0 % | 0 % | 60 % | 40 % | 384546245 |
154 | NC_017319 | AAAAC | 2 | 10 | 207708 | 207717 | 80 % | 0 % | 0 % | 20 % | 384546246 |
155 | NC_017319 | TAAAG | 2 | 10 | 209033 | 209042 | 60 % | 20 % | 20 % | 0 % | 384546248 |
156 | NC_017319 | ACTTT | 2 | 10 | 209043 | 209052 | 20 % | 60 % | 0 % | 20 % | Non-Coding |
157 | NC_017319 | CCTGT | 2 | 10 | 210529 | 210538 | 0 % | 40 % | 20 % | 40 % | Non-Coding |
158 | NC_017319 | TGGGC | 2 | 10 | 217989 | 217998 | 0 % | 20 % | 60 % | 20 % | 384546262 |
159 | NC_017319 | GCACT | 2 | 10 | 219100 | 219109 | 20 % | 20 % | 20 % | 40 % | 384546264 |
160 | NC_017319 | AGTGG | 2 | 10 | 219207 | 219216 | 20 % | 20 % | 60 % | 0 % | 384546264 |
161 | NC_017319 | ATGAA | 2 | 10 | 220883 | 220892 | 60 % | 20 % | 20 % | 0 % | Non-Coding |
162 | NC_017319 | CAAAA | 2 | 10 | 222174 | 222183 | 80 % | 0 % | 0 % | 20 % | 384546268 |
163 | NC_017319 | ACTGG | 2 | 10 | 222228 | 222237 | 20 % | 20 % | 40 % | 20 % | 384546268 |