Tri-nucleotide Repeats of Yersinia pestis biovar Medievalis str. Harbin 35 plasmid pPCP
Total Repeats: 106
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_017264 | GCC | 2 | 6 | 215 | 220 | 0 % | 0 % | 33.33 % | 66.67 % | 384412694 |
2 | NC_017264 | CGC | 2 | 6 | 229 | 234 | 0 % | 0 % | 33.33 % | 66.67 % | 384412694 |
3 | NC_017264 | CTG | 2 | 6 | 238 | 243 | 0 % | 33.33 % | 33.33 % | 33.33 % | 384412694 |
4 | NC_017264 | GAC | 2 | 6 | 448 | 453 | 33.33 % | 0 % | 33.33 % | 33.33 % | 384412694 |
5 | NC_017264 | CTT | 2 | 6 | 605 | 610 | 0 % | 66.67 % | 0 % | 33.33 % | 384412694 |
6 | NC_017264 | TGG | 2 | 6 | 611 | 616 | 0 % | 33.33 % | 66.67 % | 0 % | 384412694 |
7 | NC_017264 | AGC | 2 | 6 | 960 | 965 | 33.33 % | 0 % | 33.33 % | 33.33 % | 384412694 |
8 | NC_017264 | TGA | 2 | 6 | 1015 | 1020 | 33.33 % | 33.33 % | 33.33 % | 0 % | 384412694 |
9 | NC_017264 | CAT | 2 | 6 | 1052 | 1057 | 33.33 % | 33.33 % | 0 % | 33.33 % | 384412695 |
10 | NC_017264 | TGA | 2 | 6 | 1097 | 1102 | 33.33 % | 33.33 % | 33.33 % | 0 % | 384412695 |
11 | NC_017264 | GAA | 2 | 6 | 1243 | 1248 | 66.67 % | 0 % | 33.33 % | 0 % | 384412696 |
12 | NC_017264 | TCA | 2 | 6 | 1260 | 1265 | 33.33 % | 33.33 % | 0 % | 33.33 % | 384412696 |
13 | NC_017264 | CGG | 2 | 6 | 1304 | 1309 | 0 % | 0 % | 66.67 % | 33.33 % | 384412696 |
14 | NC_017264 | CAG | 3 | 9 | 1508 | 1516 | 33.33 % | 0 % | 33.33 % | 33.33 % | 384412696 |
15 | NC_017264 | ACG | 2 | 6 | 1564 | 1569 | 33.33 % | 0 % | 33.33 % | 33.33 % | 384412696 |
16 | NC_017264 | TCA | 2 | 6 | 1601 | 1606 | 33.33 % | 33.33 % | 0 % | 33.33 % | 384412696 |
17 | NC_017264 | TGA | 2 | 6 | 1608 | 1613 | 33.33 % | 33.33 % | 33.33 % | 0 % | 384412696 |
18 | NC_017264 | GAA | 2 | 6 | 1639 | 1644 | 66.67 % | 0 % | 33.33 % | 0 % | 384412696 |
19 | NC_017264 | TTC | 2 | 6 | 1654 | 1659 | 0 % | 66.67 % | 0 % | 33.33 % | 384412696 |
20 | NC_017264 | GCA | 2 | 6 | 1750 | 1755 | 33.33 % | 0 % | 33.33 % | 33.33 % | 384412696 |
21 | NC_017264 | TGG | 2 | 6 | 1903 | 1908 | 0 % | 33.33 % | 66.67 % | 0 % | Non-Coding |
22 | NC_017264 | CGT | 2 | 6 | 1934 | 1939 | 0 % | 33.33 % | 33.33 % | 33.33 % | Non-Coding |
23 | NC_017264 | TGA | 2 | 6 | 1948 | 1953 | 33.33 % | 33.33 % | 33.33 % | 0 % | Non-Coding |
24 | NC_017264 | CAG | 2 | 6 | 2086 | 2091 | 33.33 % | 0 % | 33.33 % | 33.33 % | Non-Coding |
25 | NC_017264 | ACA | 2 | 6 | 2106 | 2111 | 66.67 % | 0 % | 0 % | 33.33 % | Non-Coding |
26 | NC_017264 | GAT | 2 | 6 | 2231 | 2236 | 33.33 % | 33.33 % | 33.33 % | 0 % | Non-Coding |
27 | NC_017264 | GTT | 2 | 6 | 2371 | 2376 | 0 % | 66.67 % | 33.33 % | 0 % | Non-Coding |
28 | NC_017264 | GTC | 2 | 6 | 2389 | 2394 | 0 % | 33.33 % | 33.33 % | 33.33 % | Non-Coding |
29 | NC_017264 | TGT | 2 | 6 | 2526 | 2531 | 0 % | 66.67 % | 33.33 % | 0 % | Non-Coding |
30 | NC_017264 | TAC | 2 | 6 | 2711 | 2716 | 33.33 % | 33.33 % | 0 % | 33.33 % | Non-Coding |
31 | NC_017264 | AAT | 2 | 6 | 2789 | 2794 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
32 | NC_017264 | ACA | 3 | 9 | 2923 | 2931 | 66.67 % | 0 % | 0 % | 33.33 % | 384412697 |
33 | NC_017264 | CGA | 2 | 6 | 3007 | 3012 | 33.33 % | 0 % | 33.33 % | 33.33 % | 384412697 |
34 | NC_017264 | GGC | 2 | 6 | 3016 | 3021 | 0 % | 0 % | 66.67 % | 33.33 % | 384412697 |
35 | NC_017264 | GAA | 2 | 6 | 3050 | 3055 | 66.67 % | 0 % | 33.33 % | 0 % | 384412697 |
36 | NC_017264 | GCG | 2 | 6 | 3398 | 3403 | 0 % | 0 % | 66.67 % | 33.33 % | Non-Coding |
37 | NC_017264 | GCA | 2 | 6 | 3868 | 3873 | 33.33 % | 0 % | 33.33 % | 33.33 % | Non-Coding |
38 | NC_017264 | GCA | 2 | 6 | 4066 | 4071 | 33.33 % | 0 % | 33.33 % | 33.33 % | Non-Coding |
39 | NC_017264 | AAG | 2 | 6 | 4098 | 4103 | 66.67 % | 0 % | 33.33 % | 0 % | Non-Coding |
40 | NC_017264 | CAG | 2 | 6 | 4145 | 4150 | 33.33 % | 0 % | 33.33 % | 33.33 % | Non-Coding |
41 | NC_017264 | ATG | 2 | 6 | 4157 | 4162 | 33.33 % | 33.33 % | 33.33 % | 0 % | Non-Coding |
42 | NC_017264 | TGC | 2 | 6 | 4178 | 4183 | 0 % | 33.33 % | 33.33 % | 33.33 % | Non-Coding |
43 | NC_017264 | ATT | 2 | 6 | 4299 | 4304 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
44 | NC_017264 | ATC | 2 | 6 | 4383 | 4388 | 33.33 % | 33.33 % | 0 % | 33.33 % | 384412699 |
45 | NC_017264 | GAT | 2 | 6 | 4578 | 4583 | 33.33 % | 33.33 % | 33.33 % | 0 % | 384412699 |
46 | NC_017264 | TAA | 2 | 6 | 4646 | 4651 | 66.67 % | 33.33 % | 0 % | 0 % | 384412699 |
47 | NC_017264 | TAG | 2 | 6 | 4715 | 4720 | 33.33 % | 33.33 % | 33.33 % | 0 % | 384412699 |
48 | NC_017264 | TAT | 2 | 6 | 4759 | 4764 | 33.33 % | 66.67 % | 0 % | 0 % | 384412699 |
49 | NC_017264 | ATT | 2 | 6 | 4784 | 4789 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
50 | NC_017264 | CAA | 2 | 6 | 4879 | 4884 | 66.67 % | 0 % | 0 % | 33.33 % | 384412700 |
51 | NC_017264 | TAT | 2 | 6 | 4885 | 4890 | 33.33 % | 66.67 % | 0 % | 0 % | 384412700 |
52 | NC_017264 | CCT | 2 | 6 | 5161 | 5166 | 0 % | 33.33 % | 0 % | 66.67 % | 384412700 |
53 | NC_017264 | ATA | 2 | 6 | 5180 | 5185 | 66.67 % | 33.33 % | 0 % | 0 % | 384412700 |
54 | NC_017264 | CTA | 2 | 6 | 5304 | 5309 | 33.33 % | 33.33 % | 0 % | 33.33 % | 384412700 |
55 | NC_017264 | CAA | 2 | 6 | 5377 | 5382 | 66.67 % | 0 % | 0 % | 33.33 % | 384412700 |
56 | NC_017264 | ACG | 2 | 6 | 5393 | 5398 | 33.33 % | 0 % | 33.33 % | 33.33 % | 384412700 |
57 | NC_017264 | TTA | 2 | 6 | 5472 | 5477 | 33.33 % | 66.67 % | 0 % | 0 % | 384412700 |
58 | NC_017264 | ACC | 2 | 6 | 5843 | 5848 | 33.33 % | 0 % | 0 % | 66.67 % | 384412700 |
59 | NC_017264 | TAA | 2 | 6 | 5958 | 5963 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
60 | NC_017264 | CGC | 2 | 6 | 5969 | 5974 | 0 % | 0 % | 33.33 % | 66.67 % | Non-Coding |
61 | NC_017264 | AAT | 2 | 6 | 5990 | 5995 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
62 | NC_017264 | GCA | 2 | 6 | 6054 | 6059 | 33.33 % | 0 % | 33.33 % | 33.33 % | 384412701 |
63 | NC_017264 | CTG | 2 | 6 | 6158 | 6163 | 0 % | 33.33 % | 33.33 % | 33.33 % | 384412701 |
64 | NC_017264 | GAA | 2 | 6 | 6188 | 6193 | 66.67 % | 0 % | 33.33 % | 0 % | 384412701 |
65 | NC_017264 | GAC | 2 | 6 | 6537 | 6542 | 33.33 % | 0 % | 33.33 % | 33.33 % | Non-Coding |
66 | NC_017264 | ATT | 2 | 6 | 6559 | 6564 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
67 | NC_017264 | ATT | 2 | 6 | 6580 | 6585 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
68 | NC_017264 | ATA | 2 | 6 | 6614 | 6619 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
69 | NC_017264 | GAA | 2 | 6 | 6657 | 6662 | 66.67 % | 0 % | 33.33 % | 0 % | 384412702 |
70 | NC_017264 | GCA | 2 | 6 | 6712 | 6717 | 33.33 % | 0 % | 33.33 % | 33.33 % | 384412702 |
71 | NC_017264 | GAA | 2 | 6 | 6824 | 6829 | 66.67 % | 0 % | 33.33 % | 0 % | 384412702 |
72 | NC_017264 | CAG | 2 | 6 | 7106 | 7111 | 33.33 % | 0 % | 33.33 % | 33.33 % | 384412702 |
73 | NC_017264 | GGT | 2 | 6 | 7147 | 7152 | 0 % | 33.33 % | 66.67 % | 0 % | 384412702 |
74 | NC_017264 | TAA | 2 | 6 | 7164 | 7169 | 66.67 % | 33.33 % | 0 % | 0 % | 384412702 |
75 | NC_017264 | ATT | 2 | 6 | 7290 | 7295 | 33.33 % | 66.67 % | 0 % | 0 % | 384412702 |
76 | NC_017264 | ATG | 2 | 6 | 7328 | 7333 | 33.33 % | 33.33 % | 33.33 % | 0 % | 384412702 |
77 | NC_017264 | TTA | 2 | 6 | 7383 | 7388 | 33.33 % | 66.67 % | 0 % | 0 % | 384412702 |
78 | NC_017264 | ATG | 2 | 6 | 7463 | 7468 | 33.33 % | 33.33 % | 33.33 % | 0 % | 384412702 |
79 | NC_017264 | AGG | 2 | 6 | 7476 | 7481 | 33.33 % | 0 % | 66.67 % | 0 % | 384412702 |
80 | NC_017264 | TGC | 2 | 6 | 7533 | 7538 | 0 % | 33.33 % | 33.33 % | 33.33 % | 384412702 |
81 | NC_017264 | CGG | 2 | 6 | 7568 | 7573 | 0 % | 0 % | 66.67 % | 33.33 % | 384412702 |
82 | NC_017264 | TCC | 2 | 6 | 7621 | 7626 | 0 % | 33.33 % | 0 % | 66.67 % | Non-Coding |
83 | NC_017264 | GGA | 2 | 6 | 7635 | 7640 | 33.33 % | 0 % | 66.67 % | 0 % | Non-Coding |
84 | NC_017264 | AGG | 2 | 6 | 7652 | 7657 | 33.33 % | 0 % | 66.67 % | 0 % | Non-Coding |
85 | NC_017264 | TGT | 2 | 6 | 7727 | 7732 | 0 % | 66.67 % | 33.33 % | 0 % | Non-Coding |
86 | NC_017264 | GCT | 2 | 6 | 7893 | 7898 | 0 % | 33.33 % | 33.33 % | 33.33 % | 384412703 |
87 | NC_017264 | CTG | 2 | 6 | 7911 | 7916 | 0 % | 33.33 % | 33.33 % | 33.33 % | 384412703 |
88 | NC_017264 | TTC | 2 | 6 | 7966 | 7971 | 0 % | 66.67 % | 0 % | 33.33 % | 384412703 |
89 | NC_017264 | CAT | 2 | 6 | 7975 | 7980 | 33.33 % | 33.33 % | 0 % | 33.33 % | 384412703 |
90 | NC_017264 | ATC | 2 | 6 | 8000 | 8005 | 33.33 % | 33.33 % | 0 % | 33.33 % | 384412703 |
91 | NC_017264 | CGA | 2 | 6 | 8194 | 8199 | 33.33 % | 0 % | 33.33 % | 33.33 % | 384412704 |
92 | NC_017264 | TCT | 2 | 6 | 8371 | 8376 | 0 % | 66.67 % | 0 % | 33.33 % | 384412704 |
93 | NC_017264 | GTC | 2 | 6 | 8391 | 8396 | 0 % | 33.33 % | 33.33 % | 33.33 % | 384412704 |
94 | NC_017264 | CAC | 2 | 6 | 8526 | 8531 | 33.33 % | 0 % | 0 % | 66.67 % | Non-Coding |
95 | NC_017264 | CAA | 2 | 6 | 8577 | 8582 | 66.67 % | 0 % | 0 % | 33.33 % | Non-Coding |
96 | NC_017264 | CCG | 2 | 6 | 8596 | 8601 | 0 % | 0 % | 33.33 % | 66.67 % | Non-Coding |
97 | NC_017264 | TGG | 2 | 6 | 8707 | 8712 | 0 % | 33.33 % | 66.67 % | 0 % | Non-Coding |
98 | NC_017264 | CAA | 2 | 6 | 8791 | 8796 | 66.67 % | 0 % | 0 % | 33.33 % | 384412705 |
99 | NC_017264 | CAG | 2 | 6 | 8856 | 8861 | 33.33 % | 0 % | 33.33 % | 33.33 % | Non-Coding |
100 | NC_017264 | CAA | 2 | 6 | 9011 | 9016 | 66.67 % | 0 % | 0 % | 33.33 % | Non-Coding |
101 | NC_017264 | TGC | 2 | 6 | 9062 | 9067 | 0 % | 33.33 % | 33.33 % | 33.33 % | Non-Coding |
102 | NC_017264 | AAT | 2 | 6 | 9179 | 9184 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
103 | NC_017264 | CCT | 2 | 6 | 9366 | 9371 | 0 % | 33.33 % | 0 % | 66.67 % | Non-Coding |
104 | NC_017264 | CCA | 2 | 6 | 9396 | 9401 | 33.33 % | 0 % | 0 % | 66.67 % | Non-Coding |
105 | NC_017264 | AGG | 2 | 6 | 9420 | 9425 | 33.33 % | 0 % | 66.67 % | 0 % | Non-Coding |
106 | NC_017264 | ATA | 2 | 6 | 9561 | 9566 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |