Tri-nucleotide Coding Repeats of Yersinia pestis biovar Medievalis str. Harbin 35 plasmid pPCP
Total Repeats: 63
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_017264 | GCC | 2 | 6 | 215 | 220 | 0 % | 0 % | 33.33 % | 66.67 % | 384412694 |
2 | NC_017264 | CGC | 2 | 6 | 229 | 234 | 0 % | 0 % | 33.33 % | 66.67 % | 384412694 |
3 | NC_017264 | CTG | 2 | 6 | 238 | 243 | 0 % | 33.33 % | 33.33 % | 33.33 % | 384412694 |
4 | NC_017264 | GAC | 2 | 6 | 448 | 453 | 33.33 % | 0 % | 33.33 % | 33.33 % | 384412694 |
5 | NC_017264 | CTT | 2 | 6 | 605 | 610 | 0 % | 66.67 % | 0 % | 33.33 % | 384412694 |
6 | NC_017264 | TGG | 2 | 6 | 611 | 616 | 0 % | 33.33 % | 66.67 % | 0 % | 384412694 |
7 | NC_017264 | AGC | 2 | 6 | 960 | 965 | 33.33 % | 0 % | 33.33 % | 33.33 % | 384412694 |
8 | NC_017264 | TGA | 2 | 6 | 1015 | 1020 | 33.33 % | 33.33 % | 33.33 % | 0 % | 384412694 |
9 | NC_017264 | CAT | 2 | 6 | 1052 | 1057 | 33.33 % | 33.33 % | 0 % | 33.33 % | 384412695 |
10 | NC_017264 | TGA | 2 | 6 | 1097 | 1102 | 33.33 % | 33.33 % | 33.33 % | 0 % | 384412695 |
11 | NC_017264 | GAA | 2 | 6 | 1243 | 1248 | 66.67 % | 0 % | 33.33 % | 0 % | 384412696 |
12 | NC_017264 | TCA | 2 | 6 | 1260 | 1265 | 33.33 % | 33.33 % | 0 % | 33.33 % | 384412696 |
13 | NC_017264 | CGG | 2 | 6 | 1304 | 1309 | 0 % | 0 % | 66.67 % | 33.33 % | 384412696 |
14 | NC_017264 | CAG | 3 | 9 | 1508 | 1516 | 33.33 % | 0 % | 33.33 % | 33.33 % | 384412696 |
15 | NC_017264 | ACG | 2 | 6 | 1564 | 1569 | 33.33 % | 0 % | 33.33 % | 33.33 % | 384412696 |
16 | NC_017264 | TCA | 2 | 6 | 1601 | 1606 | 33.33 % | 33.33 % | 0 % | 33.33 % | 384412696 |
17 | NC_017264 | TGA | 2 | 6 | 1608 | 1613 | 33.33 % | 33.33 % | 33.33 % | 0 % | 384412696 |
18 | NC_017264 | GAA | 2 | 6 | 1639 | 1644 | 66.67 % | 0 % | 33.33 % | 0 % | 384412696 |
19 | NC_017264 | TTC | 2 | 6 | 1654 | 1659 | 0 % | 66.67 % | 0 % | 33.33 % | 384412696 |
20 | NC_017264 | GCA | 2 | 6 | 1750 | 1755 | 33.33 % | 0 % | 33.33 % | 33.33 % | 384412696 |
21 | NC_017264 | ACA | 3 | 9 | 2923 | 2931 | 66.67 % | 0 % | 0 % | 33.33 % | 384412697 |
22 | NC_017264 | CGA | 2 | 6 | 3007 | 3012 | 33.33 % | 0 % | 33.33 % | 33.33 % | 384412697 |
23 | NC_017264 | GGC | 2 | 6 | 3016 | 3021 | 0 % | 0 % | 66.67 % | 33.33 % | 384412697 |
24 | NC_017264 | GAA | 2 | 6 | 3050 | 3055 | 66.67 % | 0 % | 33.33 % | 0 % | 384412697 |
25 | NC_017264 | ATC | 2 | 6 | 4383 | 4388 | 33.33 % | 33.33 % | 0 % | 33.33 % | 384412699 |
26 | NC_017264 | GAT | 2 | 6 | 4578 | 4583 | 33.33 % | 33.33 % | 33.33 % | 0 % | 384412699 |
27 | NC_017264 | TAA | 2 | 6 | 4646 | 4651 | 66.67 % | 33.33 % | 0 % | 0 % | 384412699 |
28 | NC_017264 | TAG | 2 | 6 | 4715 | 4720 | 33.33 % | 33.33 % | 33.33 % | 0 % | 384412699 |
29 | NC_017264 | TAT | 2 | 6 | 4759 | 4764 | 33.33 % | 66.67 % | 0 % | 0 % | 384412699 |
30 | NC_017264 | CAA | 2 | 6 | 4879 | 4884 | 66.67 % | 0 % | 0 % | 33.33 % | 384412700 |
31 | NC_017264 | TAT | 2 | 6 | 4885 | 4890 | 33.33 % | 66.67 % | 0 % | 0 % | 384412700 |
32 | NC_017264 | CCT | 2 | 6 | 5161 | 5166 | 0 % | 33.33 % | 0 % | 66.67 % | 384412700 |
33 | NC_017264 | ATA | 2 | 6 | 5180 | 5185 | 66.67 % | 33.33 % | 0 % | 0 % | 384412700 |
34 | NC_017264 | CTA | 2 | 6 | 5304 | 5309 | 33.33 % | 33.33 % | 0 % | 33.33 % | 384412700 |
35 | NC_017264 | CAA | 2 | 6 | 5377 | 5382 | 66.67 % | 0 % | 0 % | 33.33 % | 384412700 |
36 | NC_017264 | ACG | 2 | 6 | 5393 | 5398 | 33.33 % | 0 % | 33.33 % | 33.33 % | 384412700 |
37 | NC_017264 | TTA | 2 | 6 | 5472 | 5477 | 33.33 % | 66.67 % | 0 % | 0 % | 384412700 |
38 | NC_017264 | ACC | 2 | 6 | 5843 | 5848 | 33.33 % | 0 % | 0 % | 66.67 % | 384412700 |
39 | NC_017264 | GCA | 2 | 6 | 6054 | 6059 | 33.33 % | 0 % | 33.33 % | 33.33 % | 384412701 |
40 | NC_017264 | CTG | 2 | 6 | 6158 | 6163 | 0 % | 33.33 % | 33.33 % | 33.33 % | 384412701 |
41 | NC_017264 | GAA | 2 | 6 | 6188 | 6193 | 66.67 % | 0 % | 33.33 % | 0 % | 384412701 |
42 | NC_017264 | GAA | 2 | 6 | 6657 | 6662 | 66.67 % | 0 % | 33.33 % | 0 % | 384412702 |
43 | NC_017264 | GCA | 2 | 6 | 6712 | 6717 | 33.33 % | 0 % | 33.33 % | 33.33 % | 384412702 |
44 | NC_017264 | GAA | 2 | 6 | 6824 | 6829 | 66.67 % | 0 % | 33.33 % | 0 % | 384412702 |
45 | NC_017264 | CAG | 2 | 6 | 7106 | 7111 | 33.33 % | 0 % | 33.33 % | 33.33 % | 384412702 |
46 | NC_017264 | GGT | 2 | 6 | 7147 | 7152 | 0 % | 33.33 % | 66.67 % | 0 % | 384412702 |
47 | NC_017264 | TAA | 2 | 6 | 7164 | 7169 | 66.67 % | 33.33 % | 0 % | 0 % | 384412702 |
48 | NC_017264 | ATT | 2 | 6 | 7290 | 7295 | 33.33 % | 66.67 % | 0 % | 0 % | 384412702 |
49 | NC_017264 | ATG | 2 | 6 | 7328 | 7333 | 33.33 % | 33.33 % | 33.33 % | 0 % | 384412702 |
50 | NC_017264 | TTA | 2 | 6 | 7383 | 7388 | 33.33 % | 66.67 % | 0 % | 0 % | 384412702 |
51 | NC_017264 | ATG | 2 | 6 | 7463 | 7468 | 33.33 % | 33.33 % | 33.33 % | 0 % | 384412702 |
52 | NC_017264 | AGG | 2 | 6 | 7476 | 7481 | 33.33 % | 0 % | 66.67 % | 0 % | 384412702 |
53 | NC_017264 | TGC | 2 | 6 | 7533 | 7538 | 0 % | 33.33 % | 33.33 % | 33.33 % | 384412702 |
54 | NC_017264 | CGG | 2 | 6 | 7568 | 7573 | 0 % | 0 % | 66.67 % | 33.33 % | 384412702 |
55 | NC_017264 | GCT | 2 | 6 | 7893 | 7898 | 0 % | 33.33 % | 33.33 % | 33.33 % | 384412703 |
56 | NC_017264 | CTG | 2 | 6 | 7911 | 7916 | 0 % | 33.33 % | 33.33 % | 33.33 % | 384412703 |
57 | NC_017264 | TTC | 2 | 6 | 7966 | 7971 | 0 % | 66.67 % | 0 % | 33.33 % | 384412703 |
58 | NC_017264 | CAT | 2 | 6 | 7975 | 7980 | 33.33 % | 33.33 % | 0 % | 33.33 % | 384412703 |
59 | NC_017264 | ATC | 2 | 6 | 8000 | 8005 | 33.33 % | 33.33 % | 0 % | 33.33 % | 384412703 |
60 | NC_017264 | CGA | 2 | 6 | 8194 | 8199 | 33.33 % | 0 % | 33.33 % | 33.33 % | 384412704 |
61 | NC_017264 | TCT | 2 | 6 | 8371 | 8376 | 0 % | 66.67 % | 0 % | 33.33 % | 384412704 |
62 | NC_017264 | GTC | 2 | 6 | 8391 | 8396 | 0 % | 33.33 % | 33.33 % | 33.33 % | 384412704 |
63 | NC_017264 | CAA | 2 | 6 | 8791 | 8796 | 66.67 % | 0 % | 0 % | 33.33 % | 384412705 |