Tetra-nucleotide Non-Coding Repeats of Yersinia pestis biovar Medievalis str. Harbin 35 plasmid pCD
Total Repeats: 113
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_017263 | CTGG | 2 | 8 | 113 | 120 | 0 % | 25 % | 50 % | 25 % | Non-Coding |
2 | NC_017263 | GTTC | 2 | 8 | 152 | 159 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
3 | NC_017263 | GTCA | 2 | 8 | 844 | 851 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
4 | NC_017263 | TAAG | 2 | 8 | 1259 | 1266 | 50 % | 25 % | 25 % | 0 % | Non-Coding |
5 | NC_017263 | AGCC | 2 | 8 | 3035 | 3042 | 25 % | 0 % | 25 % | 50 % | Non-Coding |
6 | NC_017263 | TAAA | 2 | 8 | 4191 | 4198 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
7 | NC_017263 | AGAA | 2 | 8 | 4320 | 4327 | 75 % | 0 % | 25 % | 0 % | Non-Coding |
8 | NC_017263 | ACCA | 2 | 8 | 4780 | 4787 | 50 % | 0 % | 0 % | 50 % | Non-Coding |
9 | NC_017263 | TTCC | 2 | 8 | 5033 | 5040 | 0 % | 50 % | 0 % | 50 % | Non-Coding |
10 | NC_017263 | AAGC | 2 | 8 | 5088 | 5095 | 50 % | 0 % | 25 % | 25 % | Non-Coding |
11 | NC_017263 | AATT | 2 | 8 | 5160 | 5167 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
12 | NC_017263 | GTCA | 2 | 8 | 5361 | 5368 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
13 | NC_017263 | TCCA | 2 | 8 | 5422 | 5429 | 25 % | 25 % | 0 % | 50 % | Non-Coding |
14 | NC_017263 | GACT | 2 | 8 | 5434 | 5441 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
15 | NC_017263 | GACT | 2 | 8 | 5676 | 5683 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
16 | NC_017263 | ATCA | 2 | 8 | 5943 | 5950 | 50 % | 25 % | 0 % | 25 % | Non-Coding |
17 | NC_017263 | CCAT | 2 | 8 | 5975 | 5982 | 25 % | 25 % | 0 % | 50 % | Non-Coding |
18 | NC_017263 | TGGA | 2 | 8 | 6115 | 6122 | 25 % | 25 % | 50 % | 0 % | Non-Coding |
19 | NC_017263 | CTTT | 2 | 8 | 6607 | 6614 | 0 % | 75 % | 0 % | 25 % | Non-Coding |
20 | NC_017263 | TCAG | 2 | 8 | 6719 | 6726 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
21 | NC_017263 | CCCT | 2 | 8 | 7411 | 7418 | 0 % | 25 % | 0 % | 75 % | Non-Coding |
22 | NC_017263 | CGAC | 2 | 8 | 9322 | 9329 | 25 % | 0 % | 25 % | 50 % | Non-Coding |
23 | NC_017263 | AACA | 2 | 8 | 10011 | 10018 | 75 % | 0 % | 0 % | 25 % | Non-Coding |
24 | NC_017263 | TATT | 2 | 8 | 10077 | 10084 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
25 | NC_017263 | GGCG | 2 | 8 | 11141 | 11148 | 0 % | 0 % | 75 % | 25 % | Non-Coding |
26 | NC_017263 | CCAA | 2 | 8 | 11803 | 11810 | 50 % | 0 % | 0 % | 50 % | Non-Coding |
27 | NC_017263 | TTTG | 2 | 8 | 11817 | 11824 | 0 % | 75 % | 25 % | 0 % | Non-Coding |
28 | NC_017263 | TAAA | 2 | 8 | 12904 | 12911 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
29 | NC_017263 | ATAA | 2 | 8 | 13281 | 13288 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
30 | NC_017263 | TTAT | 2 | 8 | 13449 | 13456 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
31 | NC_017263 | AATG | 2 | 8 | 14230 | 14237 | 50 % | 25 % | 25 % | 0 % | Non-Coding |
32 | NC_017263 | ATTT | 2 | 8 | 14297 | 14304 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
33 | NC_017263 | CAAA | 2 | 8 | 15657 | 15664 | 75 % | 0 % | 0 % | 25 % | Non-Coding |
34 | NC_017263 | ACAT | 2 | 8 | 15666 | 15673 | 50 % | 25 % | 0 % | 25 % | Non-Coding |
35 | NC_017263 | TTAT | 2 | 8 | 15721 | 15728 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
36 | NC_017263 | ATAA | 2 | 8 | 15776 | 15783 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
37 | NC_017263 | CATT | 2 | 8 | 16545 | 16552 | 25 % | 50 % | 0 % | 25 % | Non-Coding |
38 | NC_017263 | TTAA | 2 | 8 | 17523 | 17530 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
39 | NC_017263 | GCTT | 2 | 8 | 18689 | 18696 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
40 | NC_017263 | AGCC | 2 | 8 | 19187 | 19194 | 25 % | 0 % | 25 % | 50 % | Non-Coding |
41 | NC_017263 | CTTG | 2 | 8 | 19227 | 19234 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
42 | NC_017263 | AAGC | 2 | 8 | 19392 | 19399 | 50 % | 0 % | 25 % | 25 % | Non-Coding |
43 | NC_017263 | TGGC | 2 | 8 | 19511 | 19518 | 0 % | 25 % | 50 % | 25 % | Non-Coding |
44 | NC_017263 | AGGA | 2 | 8 | 20124 | 20131 | 50 % | 0 % | 50 % | 0 % | Non-Coding |
45 | NC_017263 | GAGC | 2 | 8 | 21622 | 21629 | 25 % | 0 % | 50 % | 25 % | Non-Coding |
46 | NC_017263 | TAAT | 2 | 8 | 22455 | 22462 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
47 | NC_017263 | CACG | 2 | 8 | 22713 | 22720 | 25 % | 0 % | 25 % | 50 % | Non-Coding |
48 | NC_017263 | ATCA | 2 | 8 | 22927 | 22934 | 50 % | 25 % | 0 % | 25 % | Non-Coding |
49 | NC_017263 | CTTT | 2 | 8 | 23507 | 23514 | 0 % | 75 % | 0 % | 25 % | Non-Coding |
50 | NC_017263 | AACC | 2 | 8 | 24330 | 24337 | 50 % | 0 % | 0 % | 50 % | Non-Coding |
51 | NC_017263 | GACT | 2 | 8 | 24476 | 24483 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
52 | NC_017263 | GCTT | 2 | 8 | 24588 | 24595 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
53 | NC_017263 | ACTC | 2 | 8 | 25113 | 25120 | 25 % | 25 % | 0 % | 50 % | Non-Coding |
54 | NC_017263 | ATCG | 2 | 8 | 25150 | 25157 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
55 | NC_017263 | TCAC | 2 | 8 | 25428 | 25435 | 25 % | 25 % | 0 % | 50 % | Non-Coding |
56 | NC_017263 | GGTA | 2 | 8 | 25639 | 25646 | 25 % | 25 % | 50 % | 0 % | Non-Coding |
57 | NC_017263 | TCAC | 2 | 8 | 25932 | 25939 | 25 % | 25 % | 0 % | 50 % | Non-Coding |
58 | NC_017263 | GTAG | 2 | 8 | 26488 | 26495 | 25 % | 25 % | 50 % | 0 % | Non-Coding |
59 | NC_017263 | TTAC | 2 | 8 | 26586 | 26593 | 25 % | 50 % | 0 % | 25 % | Non-Coding |
60 | NC_017263 | GGGT | 2 | 8 | 26735 | 26742 | 0 % | 25 % | 75 % | 0 % | Non-Coding |
61 | NC_017263 | TGCT | 2 | 8 | 26975 | 26982 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
62 | NC_017263 | GCTT | 2 | 8 | 27831 | 27838 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
63 | NC_017263 | GCAG | 2 | 8 | 27839 | 27846 | 25 % | 0 % | 50 % | 25 % | Non-Coding |
64 | NC_017263 | TGCG | 2 | 8 | 28425 | 28432 | 0 % | 25 % | 50 % | 25 % | Non-Coding |
65 | NC_017263 | GGAA | 2 | 8 | 28463 | 28470 | 50 % | 0 % | 50 % | 0 % | Non-Coding |
66 | NC_017263 | AAAT | 2 | 8 | 30216 | 30223 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
67 | NC_017263 | GTGA | 2 | 8 | 30948 | 30955 | 25 % | 25 % | 50 % | 0 % | Non-Coding |
68 | NC_017263 | AACC | 2 | 8 | 31596 | 31603 | 50 % | 0 % | 0 % | 50 % | Non-Coding |
69 | NC_017263 | ATTG | 2 | 8 | 31667 | 31674 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
70 | NC_017263 | ACCC | 2 | 8 | 32233 | 32240 | 25 % | 0 % | 0 % | 75 % | Non-Coding |
71 | NC_017263 | TGTT | 2 | 8 | 33608 | 33615 | 0 % | 75 % | 25 % | 0 % | Non-Coding |
72 | NC_017263 | GAAA | 2 | 8 | 33653 | 33660 | 75 % | 0 % | 25 % | 0 % | Non-Coding |
73 | NC_017263 | CGCA | 2 | 8 | 34293 | 34300 | 25 % | 0 % | 25 % | 50 % | Non-Coding |
74 | NC_017263 | TTAT | 2 | 8 | 35535 | 35542 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
75 | NC_017263 | TGGC | 2 | 8 | 36419 | 36426 | 0 % | 25 % | 50 % | 25 % | Non-Coding |
76 | NC_017263 | AGCG | 2 | 8 | 36584 | 36591 | 25 % | 0 % | 50 % | 25 % | Non-Coding |
77 | NC_017263 | TGAT | 2 | 8 | 37008 | 37015 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
78 | NC_017263 | TGAT | 2 | 8 | 37125 | 37132 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
79 | NC_017263 | TCGC | 2 | 8 | 37350 | 37357 | 0 % | 25 % | 25 % | 50 % | Non-Coding |
80 | NC_017263 | TTCT | 2 | 8 | 37931 | 37938 | 0 % | 75 % | 0 % | 25 % | Non-Coding |
81 | NC_017263 | TTCT | 2 | 8 | 38207 | 38214 | 0 % | 75 % | 0 % | 25 % | Non-Coding |
82 | NC_017263 | ACTA | 2 | 8 | 39152 | 39159 | 50 % | 25 % | 0 % | 25 % | Non-Coding |
83 | NC_017263 | AAAT | 2 | 8 | 39732 | 39739 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
84 | NC_017263 | TTAT | 2 | 8 | 40283 | 40290 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
85 | NC_017263 | CACT | 2 | 8 | 41857 | 41864 | 25 % | 25 % | 0 % | 50 % | Non-Coding |
86 | NC_017263 | GGCT | 2 | 8 | 41916 | 41923 | 0 % | 25 % | 50 % | 25 % | Non-Coding |
87 | NC_017263 | CAGG | 2 | 8 | 42505 | 42512 | 25 % | 0 % | 50 % | 25 % | Non-Coding |
88 | NC_017263 | AGGT | 2 | 8 | 42623 | 42630 | 25 % | 25 % | 50 % | 0 % | Non-Coding |
89 | NC_017263 | ATAA | 2 | 8 | 42893 | 42900 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
90 | NC_017263 | TGGA | 2 | 8 | 44835 | 44842 | 25 % | 25 % | 50 % | 0 % | Non-Coding |
91 | NC_017263 | TACA | 2 | 8 | 44880 | 44887 | 50 % | 25 % | 0 % | 25 % | Non-Coding |
92 | NC_017263 | TTTA | 2 | 8 | 45348 | 45355 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
93 | NC_017263 | AATA | 2 | 8 | 45364 | 45371 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
94 | NC_017263 | TTAA | 2 | 8 | 46795 | 46802 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
95 | NC_017263 | GGGA | 2 | 8 | 47903 | 47910 | 25 % | 0 % | 75 % | 0 % | Non-Coding |
96 | NC_017263 | CTTT | 2 | 8 | 48232 | 48239 | 0 % | 75 % | 0 % | 25 % | Non-Coding |
97 | NC_017263 | CAGG | 2 | 8 | 48375 | 48382 | 25 % | 0 % | 50 % | 25 % | Non-Coding |
98 | NC_017263 | AGAA | 2 | 8 | 48417 | 48424 | 75 % | 0 % | 25 % | 0 % | Non-Coding |
99 | NC_017263 | CATC | 2 | 8 | 51281 | 51288 | 25 % | 25 % | 0 % | 50 % | Non-Coding |
100 | NC_017263 | GGGC | 2 | 8 | 54167 | 54174 | 0 % | 0 % | 75 % | 25 % | Non-Coding |
101 | NC_017263 | TTAT | 3 | 12 | 54213 | 54224 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
102 | NC_017263 | GCCA | 2 | 8 | 55638 | 55645 | 25 % | 0 % | 25 % | 50 % | Non-Coding |
103 | NC_017263 | CACT | 2 | 8 | 55674 | 55681 | 25 % | 25 % | 0 % | 50 % | Non-Coding |
104 | NC_017263 | CAGT | 2 | 8 | 56124 | 56131 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
105 | NC_017263 | ATCC | 2 | 8 | 56351 | 56358 | 25 % | 25 % | 0 % | 50 % | Non-Coding |
106 | NC_017263 | CCTC | 2 | 8 | 60552 | 60559 | 0 % | 25 % | 0 % | 75 % | Non-Coding |
107 | NC_017263 | CCTG | 2 | 8 | 63426 | 63433 | 0 % | 25 % | 25 % | 50 % | Non-Coding |
108 | NC_017263 | ATAA | 2 | 8 | 64620 | 64627 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
109 | NC_017263 | ACAA | 2 | 8 | 65086 | 65093 | 75 % | 0 % | 0 % | 25 % | Non-Coding |
110 | NC_017263 | GGGA | 2 | 8 | 66303 | 66310 | 25 % | 0 % | 75 % | 0 % | Non-Coding |
111 | NC_017263 | GCCA | 2 | 8 | 67718 | 67725 | 25 % | 0 % | 25 % | 50 % | Non-Coding |
112 | NC_017263 | GCGG | 2 | 8 | 68141 | 68148 | 0 % | 0 % | 75 % | 25 % | Non-Coding |
113 | NC_017263 | CGCC | 2 | 8 | 68536 | 68543 | 0 % | 0 % | 25 % | 75 % | Non-Coding |