MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Borrelia afzelii PKo plasmid lp28-2

Total Repeats: 156

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_017239	TTA	2	6	50	55	33.33 %	66.67 %	0 %	0 %	Non-Coding
2	NC_017239	TAT	2	6	1065	1070	33.33 %	66.67 %	0 %	0 %	Non-Coding
3	NC_017239	TCT	2	6	1120	1125	0 %	66.67 %	0 %	33.33 %	Non-Coding
4	NC_017239	AAG	2	6	1151	1156	66.67 %	0 %	33.33 %	0 %	Non-Coding
5	NC_017239	AAT	3	9	1180	1188	66.67 %	33.33 %	0 %	0 %	Non-Coding
6	NC_017239	TAA	2	6	1237	1242	66.67 %	33.33 %	0 %	0 %	Non-Coding
7	NC_017239	ACT	2	6	1297	1302	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
8	NC_017239	ATT	2	6	1418	1423	33.33 %	66.67 %	0 %	0 %	Non-Coding
9	NC_017239	AGG	2	6	1424	1429	33.33 %	0 %	66.67 %	0 %	Non-Coding
10	NC_017239	CTT	2	6	1590	1595	0 %	66.67 %	0 %	33.33 %	Non-Coding
11	NC_017239	TAA	2	6	1749	1754	66.67 %	33.33 %	0 %	0 %	Non-Coding
12	NC_017239	AAT	2	6	1997	2002	66.67 %	33.33 %	0 %	0 %	Non-Coding
13	NC_017239	ACT	2	6	2021	2026	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
14	NC_017239	TTA	3	9	2106	2114	33.33 %	66.67 %	0 %	0 %	Non-Coding
15	NC_017239	ATA	2	6	2323	2328	66.67 %	33.33 %	0 %	0 %	Non-Coding
16	NC_017239	ATT	2	6	5539	5544	33.33 %	66.67 %	0 %	0 %	Non-Coding
17	NC_017239	TCT	2	6	5585	5590	0 %	66.67 %	0 %	33.33 %	Non-Coding
18	NC_017239	AAT	2	6	5593	5598	66.67 %	33.33 %	0 %	0 %	Non-Coding
19	NC_017239	CTA	2	6	5840	5845	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
20	NC_017239	TTC	2	6	6040	6045	0 %	66.67 %	0 %	33.33 %	Non-Coding
21	NC_017239	TTC	2	6	6102	6107	0 %	66.67 %	0 %	33.33 %	Non-Coding
22	NC_017239	CTT	2	6	6385	6390	0 %	66.67 %	0 %	33.33 %	Non-Coding
23	NC_017239	TTG	2	6	6674	6679	0 %	66.67 %	33.33 %	0 %	Non-Coding
24	NC_017239	TAA	2	6	6960	6965	66.67 %	33.33 %	0 %	0 %	Non-Coding
25	NC_017239	AAT	2	6	7270	7275	66.67 %	33.33 %	0 %	0 %	Non-Coding
26	NC_017239	GTA	2	6	7645	7650	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
27	NC_017239	TAA	2	6	7845	7850	66.67 %	33.33 %	0 %	0 %	Non-Coding
28	NC_017239	TAT	2	6	7973	7978	33.33 %	66.67 %	0 %	0 %	Non-Coding
29	NC_017239	TAA	2	6	7997	8002	66.67 %	33.33 %	0 %	0 %	Non-Coding
30	NC_017239	ATA	2	6	8204	8209	66.67 %	33.33 %	0 %	0 %	Non-Coding
31	NC_017239	AAT	4	12	8259	8270	66.67 %	33.33 %	0 %	0 %	Non-Coding
32	NC_017239	TAA	2	6	8344	8349	66.67 %	33.33 %	0 %	0 %	Non-Coding
33	NC_017239	TAT	2	6	8371	8376	33.33 %	66.67 %	0 %	0 %	Non-Coding
34	NC_017239	AGT	2	6	8398	8403	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
35	NC_017239	ATA	2	6	8820	8825	66.67 %	33.33 %	0 %	0 %	Non-Coding
36	NC_017239	CTG	2	6	8857	8862	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
37	NC_017239	TAT	2	6	8970	8975	33.33 %	66.67 %	0 %	0 %	Non-Coding
38	NC_017239	ATA	3	9	9412	9420	66.67 %	33.33 %	0 %	0 %	Non-Coding
39	NC_017239	TTA	2	6	9522	9527	33.33 %	66.67 %	0 %	0 %	Non-Coding
40	NC_017239	TTA	3	9	9534	9542	33.33 %	66.67 %	0 %	0 %	Non-Coding
41	NC_017239	ATT	2	6	9595	9600	33.33 %	66.67 %	0 %	0 %	Non-Coding
42	NC_017239	ATA	2	6	9732	9737	66.67 %	33.33 %	0 %	0 %	Non-Coding
43	NC_017239	GAT	2	6	9762	9767	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
44	NC_017239	TTA	2	6	10392	10397	33.33 %	66.67 %	0 %	0 %	Non-Coding
45	NC_017239	TAA	2	6	10466	10471	66.67 %	33.33 %	0 %	0 %	Non-Coding
46	NC_017239	TAT	2	6	10582	10587	33.33 %	66.67 %	0 %	0 %	Non-Coding
47	NC_017239	TGT	2	6	11104	11109	0 %	66.67 %	33.33 %	0 %	Non-Coding
48	NC_017239	TGT	2	6	11129	11134	0 %	66.67 %	33.33 %	0 %	Non-Coding
49	NC_017239	CAA	2	6	11150	11155	66.67 %	0 %	0 %	33.33 %	Non-Coding
50	NC_017239	TAT	2	6	11179	11184	33.33 %	66.67 %	0 %	0 %	Non-Coding
51	NC_017239	GTG	2	6	11187	11192	0 %	33.33 %	66.67 %	0 %	Non-Coding
52	NC_017239	TTA	2	6	11279	11284	33.33 %	66.67 %	0 %	0 %	Non-Coding
53	NC_017239	CAA	2	6	11357	11362	66.67 %	0 %	0 %	33.33 %	Non-Coding
54	NC_017239	TTA	2	6	11488	11493	33.33 %	66.67 %	0 %	0 %	Non-Coding
55	NC_017239	CCT	2	6	13177	13182	0 %	33.33 %	0 %	66.67 %	Non-Coding
56	NC_017239	ATA	2	6	13213	13218	66.67 %	33.33 %	0 %	0 %	Non-Coding
57	NC_017239	GAA	2	6	13353	13358	66.67 %	0 %	33.33 %	0 %	Non-Coding
58	NC_017239	TTC	2	6	13430	13435	0 %	66.67 %	0 %	33.33 %	Non-Coding
59	NC_017239	AAT	2	6	13447	13452	66.67 %	33.33 %	0 %	0 %	Non-Coding
60	NC_017239	TAA	2	6	13600	13605	66.67 %	33.33 %	0 %	0 %	Non-Coding
61	NC_017239	TTA	2	6	13667	13672	33.33 %	66.67 %	0 %	0 %	Non-Coding
62	NC_017239	ATA	2	6	13858	13863	66.67 %	33.33 %	0 %	0 %	Non-Coding
63	NC_017239	ATA	2	6	13873	13878	66.67 %	33.33 %	0 %	0 %	Non-Coding
64	NC_017239	AAT	2	6	13885	13890	66.67 %	33.33 %	0 %	0 %	Non-Coding
65	NC_017239	ATT	2	6	13947	13952	33.33 %	66.67 %	0 %	0 %	Non-Coding
66	NC_017239	TAC	2	6	13962	13967	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
67	NC_017239	AAT	2	6	14126	14131	66.67 %	33.33 %	0 %	0 %	Non-Coding
68	NC_017239	AGA	2	6	14149	14154	66.67 %	0 %	33.33 %	0 %	Non-Coding
69	NC_017239	TTG	2	6	14357	14362	0 %	66.67 %	33.33 %	0 %	Non-Coding
70	NC_017239	TTA	2	6	14418	14423	33.33 %	66.67 %	0 %	0 %	Non-Coding
71	NC_017239	GCT	2	6	14450	14455	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
72	NC_017239	ATT	2	6	15234	15239	33.33 %	66.67 %	0 %	0 %	Non-Coding
73	NC_017239	ATA	2	6	15254	15259	66.67 %	33.33 %	0 %	0 %	Non-Coding
74	NC_017239	ATT	2	6	15387	15392	33.33 %	66.67 %	0 %	0 %	Non-Coding
75	NC_017239	TAG	2	6	15435	15440	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
76	NC_017239	AAT	2	6	15446	15451	66.67 %	33.33 %	0 %	0 %	Non-Coding
77	NC_017239	TAT	2	6	15470	15475	33.33 %	66.67 %	0 %	0 %	Non-Coding
78	NC_017239	ATT	2	6	15589	15594	33.33 %	66.67 %	0 %	0 %	Non-Coding
79	NC_017239	ATT	2	6	15700	15705	33.33 %	66.67 %	0 %	0 %	Non-Coding
80	NC_017239	ATT	2	6	15718	15723	33.33 %	66.67 %	0 %	0 %	Non-Coding
81	NC_017239	TGA	2	6	15752	15757	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
82	NC_017239	TAA	2	6	15766	15771	66.67 %	33.33 %	0 %	0 %	Non-Coding
83	NC_017239	CAA	2	6	15873	15878	66.67 %	0 %	0 %	33.33 %	Non-Coding
84	NC_017239	ATA	2	6	15881	15886	66.67 %	33.33 %	0 %	0 %	Non-Coding
85	NC_017239	TTG	2	6	15901	15906	0 %	66.67 %	33.33 %	0 %	Non-Coding
86	NC_017239	GTT	2	6	15948	15953	0 %	66.67 %	33.33 %	0 %	Non-Coding
87	NC_017239	AGT	2	6	15972	15977	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
88	NC_017239	ATT	2	6	16319	16324	33.33 %	66.67 %	0 %	0 %	Non-Coding
89	NC_017239	AAT	2	6	16340	16345	66.67 %	33.33 %	0 %	0 %	Non-Coding
90	NC_017239	ATA	2	6	16821	16826	66.67 %	33.33 %	0 %	0 %	Non-Coding
91	NC_017239	TGA	2	6	16918	16923	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
92	NC_017239	TAA	2	6	17028	17033	66.67 %	33.33 %	0 %	0 %	Non-Coding
93	NC_017239	TTC	2	6	17050	17055	0 %	66.67 %	0 %	33.33 %	Non-Coding
94	NC_017239	ATT	2	6	17063	17068	33.33 %	66.67 %	0 %	0 %	Non-Coding
95	NC_017239	CTT	2	6	17134	17139	0 %	66.67 %	0 %	33.33 %	Non-Coding
96	NC_017239	CTT	2	6	17206	17211	0 %	66.67 %	0 %	33.33 %	Non-Coding
97	NC_017239	TAA	2	6	17341	17346	66.67 %	33.33 %	0 %	0 %	Non-Coding
98	NC_017239	AAT	2	6	17405	17410	66.67 %	33.33 %	0 %	0 %	Non-Coding
99	NC_017239	AAT	2	6	17478	17483	66.67 %	33.33 %	0 %	0 %	Non-Coding
100	NC_017239	GTG	2	6	17525	17530	0 %	33.33 %	66.67 %	0 %	Non-Coding
101	NC_017239	TAA	3	9	17640	17648	66.67 %	33.33 %	0 %	0 %	Non-Coding
102	NC_017239	TTG	3	9	17818	17826	0 %	66.67 %	33.33 %	0 %	Non-Coding
103	NC_017239	ATT	2	6	17830	17835	33.33 %	66.67 %	0 %	0 %	Non-Coding
104	NC_017239	ATT	2	6	17881	17886	33.33 %	66.67 %	0 %	0 %	Non-Coding
105	NC_017239	ATA	2	6	17913	17918	66.67 %	33.33 %	0 %	0 %	Non-Coding
106	NC_017239	TTG	2	6	19292	19297	0 %	66.67 %	33.33 %	0 %	Non-Coding
107	NC_017239	ATT	2	6	19348	19353	33.33 %	66.67 %	0 %	0 %	Non-Coding
108	NC_017239	GAT	2	6	19357	19362	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
109	NC_017239	GGT	2	6	19486	19491	0 %	33.33 %	66.67 %	0 %	Non-Coding
110	NC_017239	ATA	2	6	20118	20123	66.67 %	33.33 %	0 %	0 %	Non-Coding
111	NC_017239	TAT	2	6	20164	20169	33.33 %	66.67 %	0 %	0 %	Non-Coding
112	NC_017239	ATT	2	6	20321	20326	33.33 %	66.67 %	0 %	0 %	Non-Coding
113	NC_017239	TAA	2	6	20381	20386	66.67 %	33.33 %	0 %	0 %	Non-Coding
114	NC_017239	AAT	3	9	20434	20442	66.67 %	33.33 %	0 %	0 %	Non-Coding
115	NC_017239	TTA	2	6	20450	20455	33.33 %	66.67 %	0 %	0 %	Non-Coding
116	NC_017239	TAA	2	6	20462	20467	66.67 %	33.33 %	0 %	0 %	Non-Coding
117	NC_017239	AAG	2	6	20505	20510	66.67 %	0 %	33.33 %	0 %	Non-Coding
118	NC_017239	AAT	2	6	20691	20696	66.67 %	33.33 %	0 %	0 %	Non-Coding
119	NC_017239	TTA	2	6	20737	20742	33.33 %	66.67 %	0 %	0 %	Non-Coding
120	NC_017239	GAA	2	6	21084	21089	66.67 %	0 %	33.33 %	0 %	Non-Coding
121	NC_017239	TAG	2	6	21095	21100	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
122	NC_017239	TAC	2	6	21108	21113	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
123	NC_017239	TAA	2	6	21191	21196	66.67 %	33.33 %	0 %	0 %	Non-Coding
124	NC_017239	ATA	2	6	21309	21314	66.67 %	33.33 %	0 %	0 %	Non-Coding
125	NC_017239	TAT	2	6	21338	21343	33.33 %	66.67 %	0 %	0 %	Non-Coding
126	NC_017239	TAT	2	6	21431	21436	33.33 %	66.67 %	0 %	0 %	Non-Coding
127	NC_017239	CTT	2	6	21676	21681	0 %	66.67 %	0 %	33.33 %	Non-Coding
128	NC_017239	CTT	2	6	21807	21812	0 %	66.67 %	0 %	33.33 %	Non-Coding
129	NC_017239	TAG	2	6	21814	21819	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
130	NC_017239	AAT	2	6	21924	21929	66.67 %	33.33 %	0 %	0 %	Non-Coding
131	NC_017239	TAT	2	6	21965	21970	33.33 %	66.67 %	0 %	0 %	Non-Coding
132	NC_017239	TTA	2	6	21982	21987	33.33 %	66.67 %	0 %	0 %	Non-Coding
133	NC_017239	ACT	2	6	22167	22172	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
134	NC_017239	TAG	2	6	22198	22203	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
135	NC_017239	TAA	2	6	23075	23080	66.67 %	33.33 %	0 %	0 %	Non-Coding
136	NC_017239	TAG	2	6	23296	23301	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
137	NC_017239	TAA	2	6	23384	23389	66.67 %	33.33 %	0 %	0 %	Non-Coding
138	NC_017239	TAA	2	6	23432	23437	66.67 %	33.33 %	0 %	0 %	Non-Coding
139	NC_017239	GAA	2	6	23535	23540	66.67 %	0 %	33.33 %	0 %	Non-Coding
140	NC_017239	ATA	2	6	23545	23550	66.67 %	33.33 %	0 %	0 %	Non-Coding
141	NC_017239	TAT	2	6	23559	23564	33.33 %	66.67 %	0 %	0 %	Non-Coding
142	NC_017239	TAA	3	9	23641	23649	66.67 %	33.33 %	0 %	0 %	Non-Coding
143	NC_017239	ATT	3	9	23655	23663	33.33 %	66.67 %	0 %	0 %	Non-Coding
144	NC_017239	TTC	2	6	23672	23677	0 %	66.67 %	0 %	33.33 %	Non-Coding
145	NC_017239	AGA	2	6	23686	23691	66.67 %	0 %	33.33 %	0 %	Non-Coding
146	NC_017239	TAA	2	6	23692	23697	66.67 %	33.33 %	0 %	0 %	Non-Coding
147	NC_017239	TAT	2	6	24211	24216	33.33 %	66.67 %	0 %	0 %	Non-Coding
148	NC_017239	ATT	2	6	24751	24756	33.33 %	66.67 %	0 %	0 %	Non-Coding
149	NC_017239	GAA	2	6	24911	24916	66.67 %	0 %	33.33 %	0 %	Non-Coding
150	NC_017239	ATA	2	6	25707	25712	66.67 %	33.33 %	0 %	0 %	Non-Coding
151	NC_017239	ATT	4	12	25803	25814	33.33 %	66.67 %	0 %	0 %	Non-Coding
152	NC_017239	TAA	2	6	25822	25827	66.67 %	33.33 %	0 %	0 %	Non-Coding
153	NC_017239	CCT	2	6	26448	26453	0 %	33.33 %	0 %	66.67 %	Non-Coding
154	NC_017239	TAA	2	6	26485	26490	66.67 %	33.33 %	0 %	0 %	Non-Coding
155	NC_017239	TTA	2	6	26491	26496	33.33 %	66.67 %	0 %	0 %	Non-Coding
156	NC_017239	TAT	2	6	26513	26518	33.33 %	66.67 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.