MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Borrelia afzelii PKo plasmid lp17

Total Repeats: 156

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_017232	TAA	2	6	129	134	66.67 %	33.33 %	0 %	0 %	Non-Coding
2	NC_017232	ATA	2	6	145	150	66.67 %	33.33 %	0 %	0 %	Non-Coding
3	NC_017232	AAT	2	6	245	250	66.67 %	33.33 %	0 %	0 %	Non-Coding
4	NC_017232	TAA	2	6	319	324	66.67 %	33.33 %	0 %	0 %	Non-Coding
5	NC_017232	TAA	2	6	424	429	66.67 %	33.33 %	0 %	0 %	Non-Coding
6	NC_017232	ATT	2	6	444	449	33.33 %	66.67 %	0 %	0 %	Non-Coding
7	NC_017232	ATA	2	6	487	492	66.67 %	33.33 %	0 %	0 %	Non-Coding
8	NC_017232	AAT	2	6	510	515	66.67 %	33.33 %	0 %	0 %	Non-Coding
9	NC_017232	CTT	2	6	608	613	0 %	66.67 %	0 %	33.33 %	Non-Coding
10	NC_017232	ATT	2	6	1448	1453	33.33 %	66.67 %	0 %	0 %	Non-Coding
11	NC_017232	ATT	2	6	1478	1483	33.33 %	66.67 %	0 %	0 %	Non-Coding
12	NC_017232	TAT	2	6	1829	1834	33.33 %	66.67 %	0 %	0 %	Non-Coding
13	NC_017232	TAA	2	6	1880	1885	66.67 %	33.33 %	0 %	0 %	Non-Coding
14	NC_017232	ATA	2	6	2270	2275	66.67 %	33.33 %	0 %	0 %	Non-Coding
15	NC_017232	AGT	3	9	3817	3825	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
16	NC_017232	TTA	2	6	3942	3947	33.33 %	66.67 %	0 %	0 %	Non-Coding
17	NC_017232	TAT	2	6	3960	3965	33.33 %	66.67 %	0 %	0 %	Non-Coding
18	NC_017232	ACA	2	6	3974	3979	66.67 %	0 %	0 %	33.33 %	Non-Coding
19	NC_017232	CTT	2	6	3996	4001	0 %	66.67 %	0 %	33.33 %	Non-Coding
20	NC_017232	TAT	2	6	4048	4053	33.33 %	66.67 %	0 %	0 %	Non-Coding
21	NC_017232	ACT	2	6	4100	4105	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
22	NC_017232	CAA	2	6	4171	4176	66.67 %	0 %	0 %	33.33 %	Non-Coding
23	NC_017232	AAT	2	6	4178	4183	66.67 %	33.33 %	0 %	0 %	Non-Coding
24	NC_017232	CTA	2	6	4187	4192	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
25	NC_017232	TAT	2	6	4288	4293	33.33 %	66.67 %	0 %	0 %	Non-Coding
26	NC_017232	TTA	3	9	4450	4458	33.33 %	66.67 %	0 %	0 %	Non-Coding
27	NC_017232	ATC	2	6	4471	4476	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
28	NC_017232	CAA	2	6	4486	4491	66.67 %	0 %	0 %	33.33 %	Non-Coding
29	NC_017232	AGT	2	6	4567	4572	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
30	NC_017232	TAA	2	6	4656	4661	66.67 %	33.33 %	0 %	0 %	Non-Coding
31	NC_017232	TAT	2	6	4676	4681	33.33 %	66.67 %	0 %	0 %	Non-Coding
32	NC_017232	TAC	2	6	4778	4783	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
33	NC_017232	TTA	2	6	4846	4851	33.33 %	66.67 %	0 %	0 %	Non-Coding
34	NC_017232	TAT	2	6	5047	5052	33.33 %	66.67 %	0 %	0 %	Non-Coding
35	NC_017232	TAA	2	6	5100	5105	66.67 %	33.33 %	0 %	0 %	Non-Coding
36	NC_017232	TCT	2	6	5187	5192	0 %	66.67 %	0 %	33.33 %	Non-Coding
37	NC_017232	TAC	2	6	5273	5278	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
38	NC_017232	AAT	2	6	5317	5322	66.67 %	33.33 %	0 %	0 %	Non-Coding
39	NC_017232	ATT	2	6	5381	5386	33.33 %	66.67 %	0 %	0 %	Non-Coding
40	NC_017232	ATT	2	6	5443	5448	33.33 %	66.67 %	0 %	0 %	Non-Coding
41	NC_017232	ATT	2	6	5505	5510	33.33 %	66.67 %	0 %	0 %	Non-Coding
42	NC_017232	ATT	2	6	5517	5522	33.33 %	66.67 %	0 %	0 %	Non-Coding
43	NC_017232	ACA	2	6	5711	5716	66.67 %	0 %	0 %	33.33 %	Non-Coding
44	NC_017232	TAA	2	6	5822	5827	66.67 %	33.33 %	0 %	0 %	Non-Coding
45	NC_017232	ATT	3	9	6538	6546	33.33 %	66.67 %	0 %	0 %	Non-Coding
46	NC_017232	ATA	2	6	6549	6554	66.67 %	33.33 %	0 %	0 %	Non-Coding
47	NC_017232	CTT	2	6	6665	6670	0 %	66.67 %	0 %	33.33 %	Non-Coding
48	NC_017232	TAA	2	6	6802	6807	66.67 %	33.33 %	0 %	0 %	Non-Coding
49	NC_017232	GAT	2	6	6808	6813	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
50	NC_017232	AAT	2	6	6823	6828	66.67 %	33.33 %	0 %	0 %	Non-Coding
51	NC_017232	AAT	2	6	6886	6891	66.67 %	33.33 %	0 %	0 %	Non-Coding
52	NC_017232	ATT	2	6	6914	6919	33.33 %	66.67 %	0 %	0 %	Non-Coding
53	NC_017232	ATT	2	6	6957	6962	33.33 %	66.67 %	0 %	0 %	Non-Coding
54	NC_017232	TAA	2	6	6967	6972	66.67 %	33.33 %	0 %	0 %	Non-Coding
55	NC_017232	TAT	2	6	7014	7019	33.33 %	66.67 %	0 %	0 %	Non-Coding
56	NC_017232	AAT	2	6	7164	7169	66.67 %	33.33 %	0 %	0 %	Non-Coding
57	NC_017232	ATT	2	6	7298	7303	33.33 %	66.67 %	0 %	0 %	Non-Coding
58	NC_017232	ATA	2	6	7319	7324	66.67 %	33.33 %	0 %	0 %	Non-Coding
59	NC_017232	TAA	2	6	8021	8026	66.67 %	33.33 %	0 %	0 %	Non-Coding
60	NC_017232	ATT	2	6	8060	8065	33.33 %	66.67 %	0 %	0 %	Non-Coding
61	NC_017232	TAA	2	6	8126	8131	66.67 %	33.33 %	0 %	0 %	Non-Coding
62	NC_017232	ATT	2	6	8153	8158	33.33 %	66.67 %	0 %	0 %	Non-Coding
63	NC_017232	ATA	2	6	8812	8817	66.67 %	33.33 %	0 %	0 %	Non-Coding
64	NC_017232	TAT	3	9	8874	8882	33.33 %	66.67 %	0 %	0 %	Non-Coding
65	NC_017232	GTT	2	6	8888	8893	0 %	66.67 %	33.33 %	0 %	Non-Coding
66	NC_017232	ATT	2	6	9981	9986	33.33 %	66.67 %	0 %	0 %	Non-Coding
67	NC_017232	CTA	2	6	9997	10002	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
68	NC_017232	ATT	2	6	10457	10462	33.33 %	66.67 %	0 %	0 %	Non-Coding
69	NC_017232	AAT	2	6	10500	10505	66.67 %	33.33 %	0 %	0 %	Non-Coding
70	NC_017232	ACA	2	6	10525	10530	66.67 %	0 %	0 %	33.33 %	Non-Coding
71	NC_017232	TAA	2	6	11772	11777	66.67 %	33.33 %	0 %	0 %	Non-Coding
72	NC_017232	ATA	2	6	11877	11882	66.67 %	33.33 %	0 %	0 %	Non-Coding
73	NC_017232	AAT	2	6	11902	11907	66.67 %	33.33 %	0 %	0 %	Non-Coding
74	NC_017232	TAT	2	6	11965	11970	33.33 %	66.67 %	0 %	0 %	Non-Coding
75	NC_017232	TAA	2	6	12049	12054	66.67 %	33.33 %	0 %	0 %	Non-Coding
76	NC_017232	CAT	2	6	12061	12066	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
77	NC_017232	CTT	2	6	12085	12090	0 %	66.67 %	0 %	33.33 %	Non-Coding
78	NC_017232	ATT	2	6	12244	12249	33.33 %	66.67 %	0 %	0 %	Non-Coding
79	NC_017232	TAA	2	6	12260	12265	66.67 %	33.33 %	0 %	0 %	Non-Coding
80	NC_017232	AGA	2	6	12332	12337	66.67 %	0 %	33.33 %	0 %	Non-Coding
81	NC_017232	ACA	2	6	12373	12378	66.67 %	0 %	0 %	33.33 %	Non-Coding
82	NC_017232	TAA	2	6	12414	12419	66.67 %	33.33 %	0 %	0 %	Non-Coding
83	NC_017232	ATA	2	6	12452	12457	66.67 %	33.33 %	0 %	0 %	Non-Coding
84	NC_017232	TAA	2	6	12556	12561	66.67 %	33.33 %	0 %	0 %	Non-Coding
85	NC_017232	ATA	2	6	12608	12613	66.67 %	33.33 %	0 %	0 %	Non-Coding
86	NC_017232	ATT	2	6	13950	13955	33.33 %	66.67 %	0 %	0 %	Non-Coding
87	NC_017232	TAT	2	6	14001	14006	33.33 %	66.67 %	0 %	0 %	Non-Coding
88	NC_017232	TAT	2	6	14163	14168	33.33 %	66.67 %	0 %	0 %	Non-Coding
89	NC_017232	AGT	2	6	14273	14278	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
90	NC_017232	ATA	2	6	14334	14339	66.67 %	33.33 %	0 %	0 %	Non-Coding
91	NC_017232	TAA	3	9	14341	14349	66.67 %	33.33 %	0 %	0 %	Non-Coding
92	NC_017232	GAT	2	6	14370	14375	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
93	NC_017232	ATA	2	6	14411	14416	66.67 %	33.33 %	0 %	0 %	Non-Coding
94	NC_017232	CAG	2	6	14686	14691	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
95	NC_017232	GTA	2	6	14752	14757	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
96	NC_017232	TAA	2	6	15297	15302	66.67 %	33.33 %	0 %	0 %	Non-Coding
97	NC_017232	ATT	2	6	15332	15337	33.33 %	66.67 %	0 %	0 %	Non-Coding
98	NC_017232	GGA	2	6	15352	15357	33.33 %	0 %	66.67 %	0 %	Non-Coding
99	NC_017232	AAG	2	6	15376	15381	66.67 %	0 %	33.33 %	0 %	Non-Coding
100	NC_017232	TTA	2	6	15488	15493	33.33 %	66.67 %	0 %	0 %	Non-Coding
101	NC_017232	TAT	2	6	15505	15510	33.33 %	66.67 %	0 %	0 %	Non-Coding
102	NC_017232	ATT	2	6	15514	15519	33.33 %	66.67 %	0 %	0 %	Non-Coding
103	NC_017232	ATT	2	6	16409	16414	33.33 %	66.67 %	0 %	0 %	Non-Coding
104	NC_017232	TAA	2	6	16465	16470	66.67 %	33.33 %	0 %	0 %	Non-Coding
105	NC_017232	ATA	3	9	16473	16481	66.67 %	33.33 %	0 %	0 %	Non-Coding
106	NC_017232	TAA	2	6	16532	16537	66.67 %	33.33 %	0 %	0 %	Non-Coding
107	NC_017232	ATA	2	6	16573	16578	66.67 %	33.33 %	0 %	0 %	Non-Coding
108	NC_017232	GAA	2	6	16585	16590	66.67 %	0 %	33.33 %	0 %	Non-Coding
109	NC_017232	TAA	2	6	16592	16597	66.67 %	33.33 %	0 %	0 %	Non-Coding
110	NC_017232	ATA	2	6	16690	16695	66.67 %	33.33 %	0 %	0 %	Non-Coding
111	NC_017232	TGC	2	6	16782	16787	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
112	NC_017232	GTA	2	6	16862	16867	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
113	NC_017232	GGT	2	6	16869	16874	0 %	33.33 %	66.67 %	0 %	Non-Coding
114	NC_017232	ATT	2	6	16955	16960	33.33 %	66.67 %	0 %	0 %	Non-Coding
115	NC_017232	TAA	2	6	17021	17026	66.67 %	33.33 %	0 %	0 %	Non-Coding
116	NC_017232	TAA	2	6	17086	17091	66.67 %	33.33 %	0 %	0 %	Non-Coding
117	NC_017232	AGT	2	6	17157	17162	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
118	NC_017232	ATT	2	6	17235	17240	33.33 %	66.67 %	0 %	0 %	Non-Coding
119	NC_017232	TTA	2	6	17299	17304	33.33 %	66.67 %	0 %	0 %	Non-Coding
120	NC_017232	TCT	2	6	18278	18283	0 %	66.67 %	0 %	33.33 %	Non-Coding
121	NC_017232	TCT	2	6	18360	18365	0 %	66.67 %	0 %	33.33 %	Non-Coding
122	NC_017232	TTA	2	6	18396	18401	33.33 %	66.67 %	0 %	0 %	Non-Coding
123	NC_017232	AAT	2	6	18531	18536	66.67 %	33.33 %	0 %	0 %	Non-Coding
124	NC_017232	TAA	2	6	18638	18643	66.67 %	33.33 %	0 %	0 %	Non-Coding
125	NC_017232	TTA	2	6	18670	18675	33.33 %	66.67 %	0 %	0 %	Non-Coding
126	NC_017232	AAG	2	6	18702	18707	66.67 %	0 %	33.33 %	0 %	Non-Coding
127	NC_017232	CTT	2	6	18799	18804	0 %	66.67 %	0 %	33.33 %	Non-Coding
128	NC_017232	TTC	2	6	18850	18855	0 %	66.67 %	0 %	33.33 %	Non-Coding
129	NC_017232	AGC	2	6	18863	18868	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
130	NC_017232	CAC	2	6	18967	18972	33.33 %	0 %	0 %	66.67 %	Non-Coding
131	NC_017232	TAG	2	6	18976	18981	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
132	NC_017232	GAG	2	6	18982	18987	33.33 %	0 %	66.67 %	0 %	Non-Coding
133	NC_017232	TTA	2	6	19598	19603	33.33 %	66.67 %	0 %	0 %	Non-Coding
134	NC_017232	AAT	2	6	20156	20161	66.67 %	33.33 %	0 %	0 %	Non-Coding
135	NC_017232	TCT	2	6	20221	20226	0 %	66.67 %	0 %	33.33 %	Non-Coding
136	NC_017232	AAT	2	6	20253	20258	66.67 %	33.33 %	0 %	0 %	Non-Coding
137	NC_017232	AAT	2	6	20325	20330	66.67 %	33.33 %	0 %	0 %	Non-Coding
138	NC_017232	ATG	2	6	21013	21018	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
139	NC_017232	TAC	2	6	21053	21058	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
140	NC_017232	TAA	2	6	21071	21076	66.67 %	33.33 %	0 %	0 %	Non-Coding
141	NC_017232	ATA	2	6	21826	21831	66.67 %	33.33 %	0 %	0 %	Non-Coding
142	NC_017232	AAG	2	6	23053	23058	66.67 %	0 %	33.33 %	0 %	Non-Coding
143	NC_017232	TAG	2	6	23086	23091	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
144	NC_017232	TAT	3	9	23259	23267	33.33 %	66.67 %	0 %	0 %	Non-Coding
145	NC_017232	TAT	2	6	23420	23425	33.33 %	66.67 %	0 %	0 %	Non-Coding
146	NC_017232	ACC	2	6	23445	23450	33.33 %	0 %	0 %	66.67 %	Non-Coding
147	NC_017232	TTA	2	6	23520	23525	33.33 %	66.67 %	0 %	0 %	Non-Coding
148	NC_017232	CTA	2	6	23535	23540	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
149	NC_017232	ATT	2	6	23578	23583	33.33 %	66.67 %	0 %	0 %	Non-Coding
150	NC_017232	AAT	2	6	23600	23605	66.67 %	33.33 %	0 %	0 %	Non-Coding
151	NC_017232	TAG	2	6	23617	23622	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
152	NC_017232	AAT	2	6	23717	23722	66.67 %	33.33 %	0 %	0 %	Non-Coding
153	NC_017232	AAT	2	6	23729	23734	66.67 %	33.33 %	0 %	0 %	Non-Coding
154	NC_017232	ATT	2	6	23785	23790	33.33 %	66.67 %	0 %	0 %	Non-Coding
155	NC_017232	AAT	3	9	23799	23807	66.67 %	33.33 %	0 %	0 %	Non-Coding
156	NC_017232	ATT	2	6	24649	24654	33.33 %	66.67 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.