MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Bifidobacterium animalis subsp. lactis BLC1

Total Repeats: 63

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_017216	ATGGGC	2	12	18793	18804	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
2	NC_017216	GGTCGA	2	12	50531	50542	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
3	NC_017216	GGAAAA	2	12	51231	51242	66.67 %	0 %	33.33 %	0 %	Non-Coding
4	NC_017216	TTCCAG	2	12	57603	57614	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
5	NC_017216	CATGAG	2	12	60308	60319	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
6	NC_017216	GGGCGG	2	12	108512	108523	0 %	0 %	83.33 %	16.67 %	Non-Coding
7	NC_017216	TACAAA	2	12	139942	139953	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
8	NC_017216	CTGGCA	2	12	147057	147068	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
9	NC_017216	GATAGG	2	12	166140	166151	33.33 %	16.67 %	50 %	0 %	Non-Coding
10	NC_017216	GCATGG	2	12	166431	166442	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
11	NC_017216	GGCGCG	2	12	200923	200934	0 %	0 %	66.67 %	33.33 %	Non-Coding
12	NC_017216	GCGCCC	2	12	225589	225600	0 %	0 %	33.33 %	66.67 %	Non-Coding
13	NC_017216	GAGACG	2	12	286744	286755	33.33 %	0 %	50 %	16.67 %	Non-Coding
14	NC_017216	AGAGGA	2	12	291486	291497	50 %	0 %	50 %	0 %	Non-Coding
15	NC_017216	GCTGTT	2	12	299117	299128	0 %	50 %	33.33 %	16.67 %	Non-Coding
16	NC_017216	GCTTTT	2	12	361098	361109	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
17	NC_017216	GTTGGC	2	12	412808	412819	0 %	33.33 %	50 %	16.67 %	Non-Coding
18	NC_017216	CGCATC	2	12	445534	445545	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
19	NC_017216	GCTGAA	2	12	482330	482341	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
20	NC_017216	TGAGAT	2	12	498503	498514	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
21	NC_017216	AAGGTA	2	12	499034	499045	50 %	16.67 %	33.33 %	0 %	Non-Coding
22	NC_017216	TCCGCA	2	12	519416	519427	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
23	NC_017216	CATGCA	2	12	530963	530974	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
24	NC_017216	ATGCCG	2	12	564212	564223	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
25	NC_017216	GCGCAC	2	12	570110	570121	16.67 %	0 %	33.33 %	50 %	Non-Coding
26	NC_017216	GGAATC	2	12	619257	619268	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
27	NC_017216	TCGCTC	2	12	653666	653677	0 %	33.33 %	16.67 %	50 %	Non-Coding
28	NC_017216	GATTGC	2	12	655604	655615	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
29	NC_017216	TCGCTC	2	12	655661	655672	0 %	33.33 %	16.67 %	50 %	Non-Coding
30	NC_017216	CGACAA	2	12	669166	669177	50 %	0 %	16.67 %	33.33 %	Non-Coding
31	NC_017216	CATGCG	2	12	726421	726432	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
32	NC_017216	ATGCCC	2	12	760089	760100	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
33	NC_017216	GCCACC	2	12	806917	806928	16.67 %	0 %	16.67 %	66.67 %	Non-Coding
34	NC_017216	TTAGAC	2	12	862235	862246	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
35	NC_017216	GCCCTT	2	12	898543	898554	0 %	33.33 %	16.67 %	50 %	Non-Coding
36	NC_017216	AAAAGG	2	12	916367	916378	66.67 %	0 %	33.33 %	0 %	Non-Coding
37	NC_017216	TATCGT	2	12	935394	935405	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
38	NC_017216	CGCCTG	2	12	1016760	1016771	0 %	16.67 %	33.33 %	50 %	Non-Coding
39	NC_017216	GACATG	2	12	1091418	1091429	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
40	NC_017216	CCCATA	2	12	1109318	1109329	33.33 %	16.67 %	0 %	50 %	Non-Coding
41	NC_017216	CCCGAT	2	12	1185605	1185616	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
42	NC_017216	TTCCCT	2	12	1231796	1231807	0 %	50 %	0 %	50 %	Non-Coding
43	NC_017216	GAGCGC	2	12	1265951	1265962	16.67 %	0 %	50 %	33.33 %	Non-Coding
44	NC_017216	CGTAAG	2	12	1348154	1348165	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
45	NC_017216	TCACAT	2	12	1406272	1406283	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
46	NC_017216	GGCCAA	2	12	1424508	1424519	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
47	NC_017216	TGGCTG	2	12	1463392	1463403	0 %	33.33 %	50 %	16.67 %	Non-Coding
48	NC_017216	CTCGTT	2	12	1464719	1464730	0 %	50 %	16.67 %	33.33 %	Non-Coding
49	NC_017216	TTGCAC	2	12	1477412	1477423	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
50	NC_017216	CGCTTT	2	12	1494167	1494178	0 %	50 %	16.67 %	33.33 %	Non-Coding
51	NC_017216	GCCGTT	2	12	1512678	1512689	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
52	NC_017216	CGCTTG	2	12	1580775	1580786	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
53	NC_017216	AGAGAA	2	12	1656467	1656478	66.67 %	0 %	33.33 %	0 %	Non-Coding
54	NC_017216	GTCGAC	2	12	1687908	1687919	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
55	NC_017216	CAAAAA	2	12	1755712	1755723	83.33 %	0 %	0 %	16.67 %	Non-Coding
56	NC_017216	CCTTTG	2	12	1809606	1809617	0 %	50 %	16.67 %	33.33 %	Non-Coding
57	NC_017216	GCAATC	2	12	1824258	1824269	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
58	NC_017216	CATCTC	2	12	1836189	1836200	16.67 %	33.33 %	0 %	50 %	Non-Coding
59	NC_017216	CAATCT	2	12	1836293	1836304	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
60	NC_017216	ATGGGA	2	12	1861917	1861928	33.33 %	16.67 %	50 %	0 %	Non-Coding
61	NC_017216	CCTTTG	2	12	1885868	1885879	0 %	50 %	16.67 %	33.33 %	Non-Coding
62	NC_017216	ATCGAT	2	12	1911672	1911683	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
63	NC_017216	CTATAC	2	12	1934382	1934393	33.33 %	33.33 %	0 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.