Hexa-nucleotide Repeats of Clostridium difficile BI1 plasmid pCDBI1
Total Repeats: 24
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_017176 | AACTAA | 2 | 12 | 2527 | 2538 | 66.67 % | 16.67 % | 0 % | 16.67 % | 384358978 |
2 | NC_017176 | ACTGAT | 2 | 12 | 2889 | 2900 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | 384358979 |
3 | NC_017176 | ATAGAT | 2 | 12 | 3723 | 3734 | 50 % | 33.33 % | 16.67 % | 0 % | 384358982 |
4 | NC_017176 | TTGAAG | 2 | 12 | 4558 | 4569 | 33.33 % | 33.33 % | 33.33 % | 0 % | 384358983 |
5 | NC_017176 | TTTTAC | 2 | 12 | 11151 | 11162 | 16.67 % | 66.67 % | 0 % | 16.67 % | 384358989 |
6 | NC_017176 | GTAAAA | 2 | 12 | 11693 | 11704 | 66.67 % | 16.67 % | 16.67 % | 0 % | 384358989 |
7 | NC_017176 | GTTAAT | 2 | 12 | 12371 | 12382 | 33.33 % | 50 % | 16.67 % | 0 % | 384358989 |
8 | NC_017176 | ATATTA | 2 | 12 | 14154 | 14165 | 50 % | 50 % | 0 % | 0 % | 384358992 |
9 | NC_017176 | GCACAA | 2 | 12 | 15039 | 15050 | 50 % | 0 % | 16.67 % | 33.33 % | 384358994 |
10 | NC_017176 | AAATGA | 2 | 12 | 17601 | 17612 | 66.67 % | 16.67 % | 16.67 % | 0 % | 384358996 |
11 | NC_017176 | AAAAAT | 2 | 12 | 19942 | 19953 | 83.33 % | 16.67 % | 0 % | 0 % | Non-Coding |
12 | NC_017176 | AATAAA | 2 | 12 | 20474 | 20485 | 83.33 % | 16.67 % | 0 % | 0 % | Non-Coding |
13 | NC_017176 | TTTGCA | 2 | 12 | 21597 | 21608 | 16.67 % | 50 % | 16.67 % | 16.67 % | 384359003 |
14 | NC_017176 | ATCTGA | 2 | 12 | 22370 | 22381 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | 384359003 |
15 | NC_017176 | CAAAAT | 2 | 12 | 22510 | 22521 | 66.67 % | 16.67 % | 0 % | 16.67 % | 384359004 |
16 | NC_017176 | TAAATT | 2 | 12 | 24132 | 24143 | 50 % | 50 % | 0 % | 0 % | 384359007 |
17 | NC_017176 | TTTTTC | 2 | 12 | 26745 | 26756 | 0 % | 83.33 % | 0 % | 16.67 % | 384359010 |
18 | NC_017176 | GTTTTA | 2 | 12 | 29285 | 29296 | 16.67 % | 66.67 % | 16.67 % | 0 % | 384359013 |
19 | NC_017176 | TTTAGA | 2 | 12 | 31711 | 31722 | 33.33 % | 50 % | 16.67 % | 0 % | 384359016 |
20 | NC_017176 | TAGAGA | 2 | 12 | 35514 | 35525 | 50 % | 16.67 % | 33.33 % | 0 % | 384359023 |
21 | NC_017176 | TTTAGA | 2 | 12 | 35577 | 35588 | 33.33 % | 50 % | 16.67 % | 0 % | 384359023 |
22 | NC_017176 | AAAAGA | 2 | 12 | 38831 | 38842 | 83.33 % | 0 % | 16.67 % | 0 % | 384359030 |
23 | NC_017176 | ATGATA | 2 | 12 | 42127 | 42138 | 50 % | 33.33 % | 16.67 % | 0 % | 384359034 |
24 | NC_017176 | ATGAAA | 2 | 12 | 43972 | 43983 | 66.67 % | 16.67 % | 16.67 % | 0 % | 384359036 |