Hexa-nucleotide Repeats of Yersinia pestis D182038 plasmid pCD1
Total Repeats: 28
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_017157 | ATCTAT | 2 | 12 | 2467 | 2478 | 33.33 % | 50 % | 0 % | 16.67 % | 384124324 |
2 | NC_017157 | GATGTC | 2 | 12 | 5994 | 6005 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 384124326 |
3 | NC_017157 | TTTCCA | 2 | 12 | 8015 | 8026 | 16.67 % | 50 % | 0 % | 33.33 % | 384124328 |
4 | NC_017157 | TACATT | 2 | 12 | 13026 | 13037 | 33.33 % | 50 % | 0 % | 16.67 % | 384124334 |
5 | NC_017157 | ATTTTT | 2 | 12 | 17823 | 17834 | 16.67 % | 83.33 % | 0 % | 0 % | 384124338 |
6 | NC_017157 | TTAAAC | 2 | 12 | 19592 | 19603 | 50 % | 33.33 % | 0 % | 16.67 % | 384124340 |
7 | NC_017157 | TTATTT | 2 | 12 | 22593 | 22604 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
8 | NC_017157 | CAAGAT | 2 | 12 | 23947 | 23958 | 50 % | 16.67 % | 16.67 % | 16.67 % | 384124344 |
9 | NC_017157 | AATTAC | 2 | 12 | 27381 | 27392 | 50 % | 33.33 % | 0 % | 16.67 % | Non-Coding |
10 | NC_017157 | TGAGCG | 2 | 12 | 29163 | 29174 | 16.67 % | 16.67 % | 50 % | 16.67 % | 384124350 |
11 | NC_017157 | GAAGAT | 2 | 12 | 29248 | 29259 | 50 % | 16.67 % | 33.33 % | 0 % | 384124350 |
12 | NC_017157 | CAAGAA | 2 | 12 | 29290 | 29301 | 66.67 % | 0 % | 16.67 % | 16.67 % | 384124350 |
13 | NC_017157 | TAGAAC | 2 | 12 | 30412 | 30423 | 50 % | 16.67 % | 16.67 % | 16.67 % | 384124351 |
14 | NC_017157 | TTGGTT | 2 | 12 | 35367 | 35378 | 0 % | 66.67 % | 33.33 % | 0 % | Non-Coding |
15 | NC_017157 | TAACGT | 2 | 12 | 36868 | 36879 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | 384124358 |
16 | NC_017157 | GTTACT | 2 | 12 | 37161 | 37172 | 16.67 % | 50 % | 16.67 % | 16.67 % | 384124359 |
17 | NC_017157 | TTATGT | 2 | 12 | 37218 | 37229 | 16.67 % | 66.67 % | 16.67 % | 0 % | 384124359 |
18 | NC_017157 | TTTTGC | 2 | 12 | 42528 | 42539 | 0 % | 66.67 % | 16.67 % | 16.67 % | 384124365 |
19 | NC_017157 | GGTTAT | 2 | 12 | 44621 | 44632 | 16.67 % | 50 % | 33.33 % | 0 % | Non-Coding |
20 | NC_017157 | AATTGA | 2 | 12 | 45654 | 45665 | 50 % | 33.33 % | 16.67 % | 0 % | 384124369 |
21 | NC_017157 | TGAATG | 2 | 12 | 47483 | 47494 | 33.33 % | 33.33 % | 33.33 % | 0 % | 384124370 |
22 | NC_017157 | AGGCAC | 2 | 12 | 48463 | 48474 | 33.33 % | 0 % | 33.33 % | 33.33 % | Non-Coding |
23 | NC_017157 | AAGATT | 2 | 12 | 50218 | 50229 | 50 % | 33.33 % | 16.67 % | 0 % | 384124372 |
24 | NC_017157 | CCGGTT | 2 | 12 | 54835 | 54846 | 0 % | 33.33 % | 33.33 % | 33.33 % | Non-Coding |
25 | NC_017157 | CCAATC | 2 | 12 | 54859 | 54870 | 33.33 % | 16.67 % | 0 % | 50 % | Non-Coding |
26 | NC_017157 | TTTCCA | 2 | 12 | 58376 | 58387 | 16.67 % | 50 % | 0 % | 33.33 % | 384124377 |
27 | NC_017157 | TGGAAA | 2 | 12 | 59526 | 59537 | 50 % | 16.67 % | 33.33 % | 0 % | Non-Coding |
28 | NC_017157 | CAATTG | 2 | 12 | 60605 | 60616 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | 384124379 |