Penta-nucleotide Repeats of Yersinia pestis D182038 plasmid pCD1
Total Repeats: 42
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_017157 | TTTTG | 2 | 10 | 1532 | 1541 | 0 % | 80 % | 20 % | 0 % | Non-Coding |
2 | NC_017157 | CAGCC | 2 | 10 | 4584 | 4593 | 20 % | 0 % | 20 % | 60 % | 384124325 |
3 | NC_017157 | TTTGG | 2 | 10 | 6060 | 6069 | 0 % | 60 % | 40 % | 0 % | 384124326 |
4 | NC_017157 | GGACC | 2 | 10 | 7059 | 7068 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
5 | NC_017157 | TGTAG | 2 | 10 | 7102 | 7111 | 20 % | 40 % | 40 % | 0 % | Non-Coding |
6 | NC_017157 | ATTAA | 2 | 10 | 8295 | 8304 | 60 % | 40 % | 0 % | 0 % | Non-Coding |
7 | NC_017157 | AACAT | 2 | 10 | 10417 | 10426 | 60 % | 20 % | 0 % | 20 % | Non-Coding |
8 | NC_017157 | GCTTG | 2 | 10 | 12987 | 12996 | 0 % | 40 % | 40 % | 20 % | 384124334 |
9 | NC_017157 | TTTTA | 2 | 10 | 18475 | 18484 | 20 % | 80 % | 0 % | 0 % | Non-Coding |
10 | NC_017157 | TAAAA | 2 | 10 | 18614 | 18623 | 80 % | 20 % | 0 % | 0 % | Non-Coding |
11 | NC_017157 | GATGC | 2 | 10 | 20313 | 20322 | 20 % | 20 % | 40 % | 20 % | 384124340 |
12 | NC_017157 | GCCGC | 2 | 10 | 20556 | 20565 | 0 % | 0 % | 40 % | 60 % | 384124340 |
13 | NC_017157 | CCATC | 2 | 10 | 24436 | 24445 | 20 % | 20 % | 0 % | 60 % | 384124344 |
14 | NC_017157 | GCATC | 2 | 10 | 24709 | 24718 | 20 % | 20 % | 20 % | 40 % | 384124344 |
15 | NC_017157 | TTCAC | 2 | 10 | 32289 | 32298 | 20 % | 40 % | 0 % | 40 % | Non-Coding |
16 | NC_017157 | TTGTT | 2 | 10 | 32598 | 32607 | 0 % | 80 % | 20 % | 0 % | 384124354 |
17 | NC_017157 | GCAGA | 2 | 10 | 33498 | 33507 | 40 % | 0 % | 40 % | 20 % | 384124355 |
18 | NC_017157 | TAAAT | 2 | 10 | 34812 | 34821 | 60 % | 40 % | 0 % | 0 % | Non-Coding |
19 | NC_017157 | TTTCT | 2 | 10 | 34983 | 34992 | 0 % | 80 % | 0 % | 20 % | 384124356 |
20 | NC_017157 | CCAAG | 2 | 10 | 36251 | 36260 | 40 % | 0 % | 20 % | 40 % | 384124357 |
21 | NC_017157 | TTTGG | 2 | 10 | 37386 | 37395 | 0 % | 60 % | 40 % | 0 % | 384124359 |
22 | NC_017157 | CGTCT | 2 | 10 | 37442 | 37451 | 0 % | 40 % | 20 % | 40 % | 384124359 |
23 | NC_017157 | CTGAA | 2 | 10 | 38285 | 38294 | 40 % | 20 % | 20 % | 20 % | 384124359 |
24 | NC_017157 | GTACG | 2 | 10 | 38603 | 38612 | 20 % | 20 % | 40 % | 20 % | 384124359 |
25 | NC_017157 | CATTC | 2 | 10 | 39554 | 39563 | 20 % | 40 % | 0 % | 40 % | 384124361 |
26 | NC_017157 | AAAGT | 2 | 10 | 39763 | 39772 | 60 % | 20 % | 20 % | 0 % | 384124361 |
27 | NC_017157 | ATTGC | 2 | 10 | 40732 | 40741 | 20 % | 40 % | 20 % | 20 % | 384124362 |
28 | NC_017157 | GAATG | 2 | 10 | 40973 | 40982 | 40 % | 20 % | 40 % | 0 % | 384124362 |
29 | NC_017157 | CTATA | 2 | 10 | 47920 | 47929 | 40 % | 40 % | 0 % | 20 % | Non-Coding |
30 | NC_017157 | TGGAT | 2 | 10 | 51928 | 51937 | 20 % | 40 % | 40 % | 0 % | 384124373 |
31 | NC_017157 | GCCAT | 2 | 10 | 52438 | 52447 | 20 % | 20 % | 20 % | 40 % | 384124373 |
32 | NC_017157 | TGGCT | 2 | 10 | 52701 | 52710 | 0 % | 40 % | 40 % | 20 % | 384124373 |
33 | NC_017157 | CGGGG | 2 | 10 | 55098 | 55107 | 0 % | 0 % | 80 % | 20 % | Non-Coding |
34 | NC_017157 | AAAAG | 2 | 10 | 55341 | 55350 | 80 % | 0 % | 20 % | 0 % | Non-Coding |
35 | NC_017157 | AGCGC | 2 | 10 | 56142 | 56151 | 20 % | 0 % | 40 % | 40 % | 384124375 |
36 | NC_017157 | TCGCC | 2 | 10 | 56650 | 56659 | 0 % | 20 % | 20 % | 60 % | Non-Coding |
37 | NC_017157 | ATTAA | 2 | 10 | 58656 | 58665 | 60 % | 40 % | 0 % | 0 % | Non-Coding |
38 | NC_017157 | AATCG | 2 | 10 | 61439 | 61448 | 40 % | 20 % | 20 % | 20 % | Non-Coding |
39 | NC_017157 | CCTCA | 2 | 10 | 61521 | 61530 | 20 % | 20 % | 0 % | 60 % | Non-Coding |
40 | NC_017157 | CTGTA | 2 | 10 | 61716 | 61725 | 20 % | 40 % | 20 % | 20 % | Non-Coding |
41 | NC_017157 | GCTAA | 2 | 10 | 65086 | 65095 | 40 % | 20 % | 20 % | 20 % | 384124382 |
42 | NC_017157 | ACCTT | 2 | 10 | 69225 | 69234 | 20 % | 40 % | 0 % | 40 % | Non-Coding |