Penta-nucleotide Repeats of Yersinia pestis D106004 plasmid pMT1
Total Repeats: 53
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_017155 | GTTCG | 2 | 10 | 426 | 435 | 0 % | 40 % | 40 % | 20 % | 384124223 |
2 | NC_017155 | AAGGT | 2 | 10 | 775 | 784 | 40 % | 20 % | 40 % | 0 % | 384124223 |
3 | NC_017155 | AGCGC | 2 | 10 | 1175 | 1184 | 20 % | 0 % | 40 % | 40 % | 384124224 |
4 | NC_017155 | TCAAA | 2 | 10 | 1813 | 1822 | 60 % | 20 % | 0 % | 20 % | 384124224 |
5 | NC_017155 | CAGAG | 2 | 10 | 7499 | 7508 | 40 % | 0 % | 40 % | 20 % | 384124228 |
6 | NC_017155 | TTGTC | 2 | 10 | 7897 | 7906 | 0 % | 60 % | 20 % | 20 % | 384124228 |
7 | NC_017155 | TGCGC | 2 | 10 | 13799 | 13808 | 0 % | 20 % | 40 % | 40 % | 384124233 |
8 | NC_017155 | GGATG | 2 | 10 | 18771 | 18780 | 20 % | 20 % | 60 % | 0 % | 384124234 |
9 | NC_017155 | ACCAG | 2 | 10 | 19128 | 19137 | 40 % | 0 % | 20 % | 40 % | 384124235 |
10 | NC_017155 | TGAAC | 2 | 10 | 19339 | 19348 | 40 % | 20 % | 20 % | 20 % | 384124235 |
11 | NC_017155 | CGGTA | 2 | 10 | 21232 | 21241 | 20 % | 20 % | 40 % | 20 % | 384124239 |
12 | NC_017155 | CGACA | 2 | 10 | 21800 | 21809 | 40 % | 0 % | 20 % | 40 % | 384124239 |
13 | NC_017155 | CGGCA | 2 | 10 | 23047 | 23056 | 20 % | 0 % | 40 % | 40 % | 384124241 |
14 | NC_017155 | AGTGC | 2 | 10 | 27456 | 27465 | 20 % | 20 % | 40 % | 20 % | 384124245 |
15 | NC_017155 | CTTCG | 2 | 10 | 28389 | 28398 | 0 % | 40 % | 20 % | 40 % | 384124246 |
16 | NC_017155 | CGGAA | 2 | 10 | 29273 | 29282 | 40 % | 0 % | 40 % | 20 % | 384124247 |
17 | NC_017155 | AACGG | 2 | 10 | 29481 | 29490 | 40 % | 0 % | 40 % | 20 % | 384124247 |
18 | NC_017155 | TGCCC | 2 | 10 | 34654 | 34663 | 0 % | 20 % | 20 % | 60 % | 384124253 |
19 | NC_017155 | AAATT | 2 | 10 | 35793 | 35802 | 60 % | 40 % | 0 % | 0 % | 384124254 |
20 | NC_017155 | ATTTT | 2 | 10 | 36025 | 36034 | 20 % | 80 % | 0 % | 0 % | Non-Coding |
21 | NC_017155 | TGTCG | 2 | 10 | 36496 | 36505 | 0 % | 40 % | 40 % | 20 % | Non-Coding |
22 | NC_017155 | CCCCT | 2 | 10 | 36905 | 36914 | 0 % | 20 % | 0 % | 80 % | Non-Coding |
23 | NC_017155 | TCCCC | 2 | 10 | 37053 | 37062 | 0 % | 20 % | 0 % | 80 % | 384124255 |
24 | NC_017155 | GACTG | 2 | 10 | 39057 | 39066 | 20 % | 20 % | 40 % | 20 % | 384124257 |
25 | NC_017155 | CATTG | 2 | 10 | 39745 | 39754 | 20 % | 40 % | 20 % | 20 % | 384124258 |
26 | NC_017155 | CGTCA | 2 | 10 | 43479 | 43488 | 20 % | 20 % | 20 % | 40 % | Non-Coding |
27 | NC_017155 | ACGTA | 2 | 10 | 45547 | 45556 | 40 % | 20 % | 20 % | 20 % | 384124262 |
28 | NC_017155 | ACTTA | 2 | 10 | 47216 | 47225 | 40 % | 40 % | 0 % | 20 % | 384124263 |
29 | NC_017155 | CAGCG | 2 | 10 | 49603 | 49612 | 20 % | 0 % | 40 % | 40 % | 384124265 |
30 | NC_017155 | CCATT | 2 | 10 | 50205 | 50214 | 20 % | 40 % | 0 % | 40 % | 384124267 |
31 | NC_017155 | GGGGT | 2 | 10 | 55283 | 55292 | 0 % | 20 % | 80 % | 0 % | Non-Coding |
32 | NC_017155 | GCTGC | 2 | 10 | 55524 | 55533 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
33 | NC_017155 | GCGAT | 2 | 10 | 55832 | 55841 | 20 % | 20 % | 40 % | 20 % | 384124272 |
34 | NC_017155 | CGCAG | 2 | 10 | 58923 | 58932 | 20 % | 0 % | 40 % | 40 % | 384124274 |
35 | NC_017155 | GAAGA | 2 | 10 | 61165 | 61174 | 60 % | 0 % | 40 % | 0 % | 384124275 |
36 | NC_017155 | TGAAC | 2 | 10 | 62509 | 62518 | 40 % | 20 % | 20 % | 20 % | 384124276 |
37 | NC_017155 | ATCAG | 2 | 10 | 65115 | 65124 | 40 % | 20 % | 20 % | 20 % | 384124277 |
38 | NC_017155 | AATTG | 2 | 10 | 68642 | 68651 | 40 % | 40 % | 20 % | 0 % | 384124280 |
39 | NC_017155 | TAAAA | 2 | 10 | 69719 | 69728 | 80 % | 20 % | 0 % | 0 % | 384124280 |
40 | NC_017155 | GGAAT | 2 | 10 | 72383 | 72392 | 40 % | 20 % | 40 % | 0 % | Non-Coding |
41 | NC_017155 | AACAA | 2 | 10 | 76714 | 76723 | 80 % | 0 % | 0 % | 20 % | 384124286 |
42 | NC_017155 | GGTAA | 2 | 10 | 79722 | 79731 | 40 % | 20 % | 40 % | 0 % | Non-Coding |
43 | NC_017155 | CCGTT | 2 | 10 | 80283 | 80292 | 0 % | 40 % | 20 % | 40 % | Non-Coding |
44 | NC_017155 | AAAGA | 2 | 10 | 83394 | 83403 | 80 % | 0 % | 20 % | 0 % | 384124291 |
45 | NC_017155 | CGCTT | 2 | 10 | 86073 | 86082 | 0 % | 40 % | 20 % | 40 % | 384124293 |
46 | NC_017155 | TGATT | 2 | 10 | 86487 | 86496 | 20 % | 60 % | 20 % | 0 % | 384124293 |
47 | NC_017155 | CTGCG | 2 | 10 | 88018 | 88027 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
48 | NC_017155 | GGAAT | 2 | 10 | 89141 | 89150 | 40 % | 20 % | 40 % | 0 % | 384124295 |
49 | NC_017155 | CTCTA | 2 | 10 | 90417 | 90426 | 20 % | 40 % | 0 % | 40 % | Non-Coding |
50 | NC_017155 | TGTCG | 2 | 10 | 90622 | 90631 | 0 % | 40 % | 40 % | 20 % | Non-Coding |
51 | NC_017155 | CTGTC | 2 | 10 | 91432 | 91441 | 0 % | 40 % | 20 % | 40 % | Non-Coding |
52 | NC_017155 | CCTCG | 2 | 10 | 92577 | 92586 | 0 % | 20 % | 20 % | 60 % | 384124298 |
53 | NC_017155 | ACGGC | 2 | 10 | 93014 | 93023 | 20 % | 0 % | 40 % | 40 % | 384124298 |