Tetra-nucleotide Non-Coding Repeats of Selenomonas ruminantium subsp. lactilytica TAM6421 plasmid pSRC1
Total Repeats: 80
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_017078 | TTTA | 2 | 8 | 2291 | 2298 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
2 | NC_017078 | TTAT | 2 | 8 | 2311 | 2318 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
3 | NC_017078 | GAAT | 2 | 8 | 5962 | 5969 | 50 % | 25 % | 25 % | 0 % | Non-Coding |
4 | NC_017078 | GCAA | 2 | 8 | 18699 | 18706 | 50 % | 0 % | 25 % | 25 % | Non-Coding |
5 | NC_017078 | TCTG | 2 | 8 | 22377 | 22384 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
6 | NC_017078 | CTGT | 2 | 8 | 22389 | 22396 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
7 | NC_017078 | TTAT | 2 | 8 | 26802 | 26809 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
8 | NC_017078 | GAAA | 2 | 8 | 27635 | 27642 | 75 % | 0 % | 25 % | 0 % | Non-Coding |
9 | NC_017078 | CAAT | 2 | 8 | 29740 | 29747 | 50 % | 25 % | 0 % | 25 % | Non-Coding |
10 | NC_017078 | CTTA | 2 | 8 | 31317 | 31324 | 25 % | 50 % | 0 % | 25 % | Non-Coding |
11 | NC_017078 | TCTA | 2 | 8 | 34613 | 34620 | 25 % | 50 % | 0 % | 25 % | Non-Coding |
12 | NC_017078 | AGCC | 2 | 8 | 36077 | 36084 | 25 % | 0 % | 25 % | 50 % | Non-Coding |
13 | NC_017078 | TGAA | 2 | 8 | 37650 | 37657 | 50 % | 25 % | 25 % | 0 % | Non-Coding |
14 | NC_017078 | AGGA | 2 | 8 | 39397 | 39404 | 50 % | 0 % | 50 % | 0 % | Non-Coding |
15 | NC_017078 | TTAT | 2 | 8 | 46716 | 46723 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
16 | NC_017078 | TAAA | 2 | 8 | 49098 | 49105 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
17 | NC_017078 | TAAA | 2 | 8 | 53856 | 53863 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
18 | NC_017078 | GATT | 2 | 8 | 56306 | 56313 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
19 | NC_017078 | AAGT | 2 | 8 | 61231 | 61238 | 50 % | 25 % | 25 % | 0 % | Non-Coding |
20 | NC_017078 | AAAT | 2 | 8 | 70133 | 70140 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
21 | NC_017078 | CCTT | 2 | 8 | 72489 | 72496 | 0 % | 50 % | 0 % | 50 % | Non-Coding |
22 | NC_017078 | GGAT | 2 | 8 | 77484 | 77491 | 25 % | 25 % | 50 % | 0 % | Non-Coding |
23 | NC_017078 | GTAT | 2 | 8 | 80073 | 80080 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
24 | NC_017078 | AAGA | 2 | 8 | 80385 | 80392 | 75 % | 0 % | 25 % | 0 % | Non-Coding |
25 | NC_017078 | AGGG | 2 | 8 | 82673 | 82680 | 25 % | 0 % | 75 % | 0 % | Non-Coding |
26 | NC_017078 | GATT | 2 | 8 | 84284 | 84291 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
27 | NC_017078 | CAAT | 2 | 8 | 84412 | 84419 | 50 % | 25 % | 0 % | 25 % | Non-Coding |
28 | NC_017078 | AACT | 2 | 8 | 88111 | 88118 | 50 % | 25 % | 0 % | 25 % | Non-Coding |
29 | NC_017078 | AGAC | 2 | 8 | 92048 | 92055 | 50 % | 0 % | 25 % | 25 % | Non-Coding |
30 | NC_017078 | AATT | 2 | 8 | 93917 | 93924 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
31 | NC_017078 | ATCC | 2 | 8 | 111309 | 111316 | 25 % | 25 % | 0 % | 50 % | Non-Coding |
32 | NC_017078 | GCCT | 2 | 8 | 111369 | 111376 | 0 % | 25 % | 25 % | 50 % | Non-Coding |
33 | NC_017078 | AAGG | 2 | 8 | 127042 | 127049 | 50 % | 0 % | 50 % | 0 % | Non-Coding |
34 | NC_017078 | CCTT | 2 | 8 | 133221 | 133228 | 0 % | 50 % | 0 % | 50 % | Non-Coding |
35 | NC_017078 | TGGC | 2 | 8 | 133291 | 133298 | 0 % | 25 % | 50 % | 25 % | Non-Coding |
36 | NC_017078 | TTGT | 2 | 8 | 133556 | 133563 | 0 % | 75 % | 25 % | 0 % | Non-Coding |
37 | NC_017078 | AGGA | 2 | 8 | 137411 | 137418 | 50 % | 0 % | 50 % | 0 % | Non-Coding |
38 | NC_017078 | ATAA | 2 | 8 | 138808 | 138815 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
39 | NC_017078 | TTCG | 2 | 8 | 143583 | 143590 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
40 | NC_017078 | ATAG | 2 | 8 | 154653 | 154660 | 50 % | 25 % | 25 % | 0 % | Non-Coding |
41 | NC_017078 | TTAG | 2 | 8 | 154752 | 154759 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
42 | NC_017078 | TCAC | 2 | 8 | 157278 | 157285 | 25 % | 25 % | 0 % | 50 % | Non-Coding |
43 | NC_017078 | ATAG | 2 | 8 | 157436 | 157443 | 50 % | 25 % | 25 % | 0 % | Non-Coding |
44 | NC_017078 | TTGG | 2 | 8 | 172657 | 172664 | 0 % | 50 % | 50 % | 0 % | Non-Coding |
45 | NC_017078 | AGTT | 2 | 8 | 179840 | 179847 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
46 | NC_017078 | GGCA | 2 | 8 | 180385 | 180392 | 25 % | 0 % | 50 % | 25 % | Non-Coding |
47 | NC_017078 | GCTT | 2 | 8 | 180475 | 180482 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
48 | NC_017078 | GGAG | 2 | 8 | 181916 | 181923 | 25 % | 0 % | 75 % | 0 % | Non-Coding |
49 | NC_017078 | AAAC | 2 | 8 | 184551 | 184558 | 75 % | 0 % | 0 % | 25 % | Non-Coding |
50 | NC_017078 | GCTT | 2 | 8 | 184564 | 184571 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
51 | NC_017078 | ATTT | 2 | 8 | 184576 | 184583 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
52 | NC_017078 | GAAT | 2 | 8 | 185968 | 185975 | 50 % | 25 % | 25 % | 0 % | Non-Coding |
53 | NC_017078 | TTAA | 2 | 8 | 189822 | 189829 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
54 | NC_017078 | TGTC | 2 | 8 | 195977 | 195984 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
55 | NC_017078 | GCCA | 2 | 8 | 196087 | 196094 | 25 % | 0 % | 25 % | 50 % | Non-Coding |
56 | NC_017078 | AATA | 2 | 8 | 199940 | 199947 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
57 | NC_017078 | ATTG | 2 | 8 | 203041 | 203048 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
58 | NC_017078 | ATGT | 2 | 8 | 203165 | 203172 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
59 | NC_017078 | TAAA | 2 | 8 | 234667 | 234674 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
60 | NC_017078 | TTTA | 2 | 8 | 237956 | 237963 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
61 | NC_017078 | AGCA | 2 | 8 | 242523 | 242530 | 50 % | 0 % | 25 % | 25 % | Non-Coding |
62 | NC_017078 | AAAC | 2 | 8 | 242560 | 242567 | 75 % | 0 % | 0 % | 25 % | Non-Coding |
63 | NC_017078 | CTAT | 2 | 8 | 251323 | 251330 | 25 % | 50 % | 0 % | 25 % | Non-Coding |
64 | NC_017078 | AAAT | 2 | 8 | 251463 | 251470 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
65 | NC_017078 | ATTA | 2 | 8 | 251733 | 251740 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
66 | NC_017078 | ATGA | 2 | 8 | 251767 | 251774 | 50 % | 25 % | 25 % | 0 % | Non-Coding |
67 | NC_017078 | ACTG | 2 | 8 | 254837 | 254844 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
68 | NC_017078 | ATTT | 2 | 8 | 261731 | 261738 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
69 | NC_017078 | CATA | 2 | 8 | 266312 | 266319 | 50 % | 25 % | 0 % | 25 % | Non-Coding |
70 | NC_017078 | AGGC | 2 | 8 | 266409 | 266416 | 25 % | 0 % | 50 % | 25 % | Non-Coding |
71 | NC_017078 | AGGG | 2 | 8 | 266487 | 266494 | 25 % | 0 % | 75 % | 0 % | Non-Coding |
72 | NC_017078 | AAAG | 2 | 8 | 269338 | 269345 | 75 % | 0 % | 25 % | 0 % | Non-Coding |
73 | NC_017078 | CTTT | 2 | 8 | 271097 | 271104 | 0 % | 75 % | 0 % | 25 % | Non-Coding |
74 | NC_017078 | GTAT | 2 | 8 | 271304 | 271311 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
75 | NC_017078 | TCGT | 2 | 8 | 273666 | 273673 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
76 | NC_017078 | AAAT | 2 | 8 | 274717 | 274724 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
77 | NC_017078 | AAAT | 2 | 8 | 275956 | 275963 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
78 | NC_017078 | AGTC | 2 | 8 | 280255 | 280262 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
79 | NC_017078 | TTTA | 2 | 8 | 284365 | 284372 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
80 | NC_017078 | TTAA | 2 | 8 | 285349 | 285356 | 50 % | 50 % | 0 % | 0 % | Non-Coding |