MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Selenomonas ruminantium subsp. lactilytica TAM6421 plasmid pSRC5

Total Repeats: 69

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_017074	CAA	2	6	1629	1634	66.67 %	0 %	0 %	33.33 %	Non-Coding
2	NC_017074	CGA	2	6	1662	1667	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
3	NC_017074	CTT	2	6	1773	1778	0 %	66.67 %	0 %	33.33 %	Non-Coding
4	NC_017074	CCT	2	6	2827	2832	0 %	33.33 %	0 %	66.67 %	Non-Coding
5	NC_017074	AAT	2	6	2860	2865	66.67 %	33.33 %	0 %	0 %	Non-Coding
6	NC_017074	ACA	2	6	3062	3067	66.67 %	0 %	0 %	33.33 %	Non-Coding
7	NC_017074	CTT	2	6	3590	3595	0 %	66.67 %	0 %	33.33 %	Non-Coding
8	NC_017074	AGA	2	6	3640	3645	66.67 %	0 %	33.33 %	0 %	Non-Coding
9	NC_017074	GCA	2	6	3664	3669	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
10	NC_017074	GTC	2	6	3779	3784	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
11	NC_017074	ATT	2	6	3795	3800	33.33 %	66.67 %	0 %	0 %	Non-Coding
12	NC_017074	GCT	2	6	3833	3838	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
13	NC_017074	ACT	2	6	3844	3849	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
14	NC_017074	AGA	2	6	3868	3873	66.67 %	0 %	33.33 %	0 %	Non-Coding
15	NC_017074	GAG	2	6	4236	4241	33.33 %	0 %	66.67 %	0 %	Non-Coding
16	NC_017074	GCA	2	6	4451	4456	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
17	NC_017074	TTG	2	6	4457	4462	0 %	66.67 %	33.33 %	0 %	Non-Coding
18	NC_017074	GTC	2	6	4475	4480	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
19	NC_017074	CCT	2	6	4488	4493	0 %	33.33 %	0 %	66.67 %	Non-Coding
20	NC_017074	TGT	2	6	4519	4524	0 %	66.67 %	33.33 %	0 %	Non-Coding
21	NC_017074	GCC	2	6	4583	4588	0 %	0 %	33.33 %	66.67 %	Non-Coding
22	NC_017074	AGA	2	6	4725	4730	66.67 %	0 %	33.33 %	0 %	Non-Coding
23	NC_017074	GGA	2	6	5043	5048	33.33 %	0 %	66.67 %	0 %	Non-Coding
24	NC_017074	ATA	2	6	5514	5519	66.67 %	33.33 %	0 %	0 %	Non-Coding
25	NC_017074	TGT	2	6	5527	5532	0 %	66.67 %	33.33 %	0 %	Non-Coding
26	NC_017074	GCT	2	6	5542	5547	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
27	NC_017074	CGT	2	6	5574	5579	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
28	NC_017074	ACA	2	6	5702	5707	66.67 %	0 %	0 %	33.33 %	Non-Coding
29	NC_017074	AAC	2	6	5719	5724	66.67 %	0 %	0 %	33.33 %	Non-Coding
30	NC_017074	TAT	2	6	5830	5835	33.33 %	66.67 %	0 %	0 %	Non-Coding
31	NC_017074	ACA	2	6	5987	5992	66.67 %	0 %	0 %	33.33 %	Non-Coding
32	NC_017074	ACA	2	6	7809	7814	66.67 %	0 %	0 %	33.33 %	Non-Coding
33	NC_017074	AGG	2	6	7884	7889	33.33 %	0 %	66.67 %	0 %	Non-Coding
34	NC_017074	TCC	3	9	9621	9629	0 %	33.33 %	0 %	66.67 %	Non-Coding
35	NC_017074	CTG	2	6	9667	9672	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
36	NC_017074	CAG	2	6	9692	9697	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
37	NC_017074	TAT	2	6	9708	9713	33.33 %	66.67 %	0 %	0 %	Non-Coding
38	NC_017074	AAT	2	6	9718	9723	66.67 %	33.33 %	0 %	0 %	Non-Coding
39	NC_017074	ATT	2	6	9730	9735	33.33 %	66.67 %	0 %	0 %	Non-Coding
40	NC_017074	TAA	2	6	9776	9781	66.67 %	33.33 %	0 %	0 %	Non-Coding
41	NC_017074	ACC	2	6	9791	9796	33.33 %	0 %	0 %	66.67 %	Non-Coding
42	NC_017074	GGA	2	6	10584	10589	33.33 %	0 %	66.67 %	0 %	Non-Coding
43	NC_017074	TAG	2	6	10904	10909	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
44	NC_017074	ACA	2	6	11972	11977	66.67 %	0 %	0 %	33.33 %	Non-Coding
45	NC_017074	AAG	2	6	11982	11987	66.67 %	0 %	33.33 %	0 %	Non-Coding
46	NC_017074	TAT	2	6	14711	14716	33.33 %	66.67 %	0 %	0 %	Non-Coding
47	NC_017074	TTG	2	6	17848	17853	0 %	66.67 %	33.33 %	0 %	Non-Coding
48	NC_017074	TAT	2	6	17896	17901	33.33 %	66.67 %	0 %	0 %	Non-Coding
49	NC_017074	TAG	2	6	20729	20734	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
50	NC_017074	AAC	2	6	20821	20826	66.67 %	0 %	0 %	33.33 %	Non-Coding
51	NC_017074	CCT	2	6	21297	21302	0 %	33.33 %	0 %	66.67 %	Non-Coding
52	NC_017074	CTT	2	6	21308	21313	0 %	66.67 %	0 %	33.33 %	Non-Coding
53	NC_017074	GAC	2	6	21776	21781	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
54	NC_017074	TAC	2	6	21792	21797	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
55	NC_017074	CCT	2	6	24799	24804	0 %	33.33 %	0 %	66.67 %	Non-Coding
56	NC_017074	AGG	2	6	24817	24822	33.33 %	0 %	66.67 %	0 %	Non-Coding
57	NC_017074	TAT	2	6	27055	27060	33.33 %	66.67 %	0 %	0 %	Non-Coding
58	NC_017074	AGG	2	6	27086	27091	33.33 %	0 %	66.67 %	0 %	Non-Coding
59	NC_017074	ATA	3	9	32013	32021	66.67 %	33.33 %	0 %	0 %	Non-Coding
60	NC_017074	CAG	2	6	32026	32031	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
61	NC_017074	ATT	2	6	32061	32066	33.33 %	66.67 %	0 %	0 %	Non-Coding
62	NC_017074	ACT	2	6	32083	32088	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
63	NC_017074	ATT	2	6	33400	33405	33.33 %	66.67 %	0 %	0 %	Non-Coding
64	NC_017074	TAT	2	6	35002	35007	33.33 %	66.67 %	0 %	0 %	Non-Coding
65	NC_017074	TCC	2	6	35033	35038	0 %	33.33 %	0 %	66.67 %	Non-Coding
66	NC_017074	ACC	2	6	35052	35057	33.33 %	0 %	0 %	66.67 %	Non-Coding
67	NC_017074	GGT	2	6	35067	35072	0 %	33.33 %	66.67 %	0 %	Non-Coding
68	NC_017074	GTT	2	6	35107	35112	0 %	66.67 %	33.33 %	0 %	Non-Coding
69	NC_017074	CTA	2	6	35122	35127	33.33 %	33.33 %	0 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.