Hexa-nucleotide Non-Coding Repeats of Rickettsia slovaca str. D-CWPP chromosome
Total Repeats: 120
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_017065 | CAAATA | 2 | 12 | 27365 | 27376 | 66.67 % | 16.67 % | 0 % | 16.67 % | Non-Coding |
2 | NC_017065 | TAAAGT | 2 | 12 | 27528 | 27539 | 50 % | 33.33 % | 16.67 % | 0 % | Non-Coding |
3 | NC_017065 | TTTAGG | 2 | 12 | 28921 | 28932 | 16.67 % | 50 % | 33.33 % | 0 % | Non-Coding |
4 | NC_017065 | TTTTTG | 2 | 12 | 38324 | 38335 | 0 % | 83.33 % | 16.67 % | 0 % | Non-Coding |
5 | NC_017065 | AAGAAA | 2 | 12 | 39262 | 39273 | 83.33 % | 0 % | 16.67 % | 0 % | Non-Coding |
6 | NC_017065 | ATCTTT | 2 | 12 | 41681 | 41692 | 16.67 % | 66.67 % | 0 % | 16.67 % | Non-Coding |
7 | NC_017065 | AGTATT | 2 | 12 | 51892 | 51903 | 33.33 % | 50 % | 16.67 % | 0 % | Non-Coding |
8 | NC_017065 | GCGGGA | 2 | 12 | 55727 | 55738 | 16.67 % | 0 % | 66.67 % | 16.67 % | Non-Coding |
9 | NC_017065 | TATAGT | 2 | 12 | 75751 | 75762 | 33.33 % | 50 % | 16.67 % | 0 % | Non-Coding |
10 | NC_017065 | TTTTAA | 2 | 12 | 94011 | 94022 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
11 | NC_017065 | TAAAAA | 2 | 12 | 96721 | 96732 | 83.33 % | 16.67 % | 0 % | 0 % | Non-Coding |
12 | NC_017065 | TATTTT | 2 | 12 | 131013 | 131024 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
13 | NC_017065 | CAATAT | 2 | 12 | 164424 | 164435 | 50 % | 33.33 % | 0 % | 16.67 % | Non-Coding |
14 | NC_017065 | TTTTAA | 2 | 12 | 171063 | 171074 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
15 | NC_017065 | TATTTA | 2 | 12 | 211542 | 211553 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
16 | NC_017065 | AAATGA | 2 | 12 | 212858 | 212869 | 66.67 % | 16.67 % | 16.67 % | 0 % | Non-Coding |
17 | NC_017065 | TCTGTC | 2 | 12 | 234313 | 234324 | 0 % | 50 % | 16.67 % | 33.33 % | Non-Coding |
18 | NC_017065 | ATAAAT | 2 | 12 | 252565 | 252576 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
19 | NC_017065 | TATTTT | 2 | 12 | 256760 | 256771 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
20 | NC_017065 | TAATTA | 2 | 12 | 257685 | 257696 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
21 | NC_017065 | AAATAA | 2 | 12 | 265321 | 265332 | 83.33 % | 16.67 % | 0 % | 0 % | Non-Coding |
22 | NC_017065 | AAAATG | 2 | 12 | 265387 | 265398 | 66.67 % | 16.67 % | 16.67 % | 0 % | Non-Coding |
23 | NC_017065 | ATGACG | 2 | 12 | 274128 | 274139 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | Non-Coding |
24 | NC_017065 | ATTGCA | 2 | 12 | 278176 | 278187 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | Non-Coding |
25 | NC_017065 | TAAAAT | 2 | 12 | 286732 | 286743 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
26 | NC_017065 | CCTGAA | 2 | 12 | 288359 | 288370 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | Non-Coding |
27 | NC_017065 | CAAATA | 2 | 12 | 293896 | 293907 | 66.67 % | 16.67 % | 0 % | 16.67 % | Non-Coding |
28 | NC_017065 | TATTGT | 2 | 12 | 297296 | 297307 | 16.67 % | 66.67 % | 16.67 % | 0 % | Non-Coding |
29 | NC_017065 | ATCTTT | 2 | 12 | 310125 | 310136 | 16.67 % | 66.67 % | 0 % | 16.67 % | Non-Coding |
30 | NC_017065 | AATATT | 2 | 12 | 346118 | 346129 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
31 | NC_017065 | GCTATA | 2 | 12 | 369643 | 369654 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | Non-Coding |
32 | NC_017065 | ATTTAT | 2 | 12 | 374260 | 374271 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
33 | NC_017065 | AAGATA | 2 | 12 | 375386 | 375397 | 66.67 % | 16.67 % | 16.67 % | 0 % | Non-Coding |
34 | NC_017065 | ATAAAA | 2 | 12 | 375800 | 375811 | 83.33 % | 16.67 % | 0 % | 0 % | Non-Coding |
35 | NC_017065 | TTTTAC | 2 | 12 | 377949 | 377960 | 16.67 % | 66.67 % | 0 % | 16.67 % | Non-Coding |
36 | NC_017065 | ATATAA | 2 | 12 | 380717 | 380728 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
37 | NC_017065 | TATTGT | 2 | 12 | 390258 | 390269 | 16.67 % | 66.67 % | 16.67 % | 0 % | Non-Coding |
38 | NC_017065 | TAAAAT | 2 | 12 | 391926 | 391937 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
39 | NC_017065 | AAATTA | 2 | 12 | 391949 | 391960 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
40 | NC_017065 | TTATAT | 2 | 12 | 453751 | 453762 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
41 | NC_017065 | TGTAGG | 2 | 12 | 470031 | 470042 | 16.67 % | 33.33 % | 50 % | 0 % | Non-Coding |
42 | NC_017065 | AATATC | 2 | 12 | 489067 | 489078 | 50 % | 33.33 % | 0 % | 16.67 % | Non-Coding |
43 | NC_017065 | TTGGCG | 2 | 12 | 498043 | 498054 | 0 % | 33.33 % | 50 % | 16.67 % | Non-Coding |
44 | NC_017065 | AAATTT | 2 | 12 | 498091 | 498102 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
45 | NC_017065 | ATCAGT | 2 | 12 | 512866 | 512877 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | Non-Coding |
46 | NC_017065 | ATACCG | 3 | 18 | 522474 | 522491 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | Non-Coding |
47 | NC_017065 | TTAATT | 2 | 12 | 528390 | 528401 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
48 | NC_017065 | TCATTG | 2 | 12 | 533597 | 533608 | 16.67 % | 50 % | 16.67 % | 16.67 % | Non-Coding |
49 | NC_017065 | TAGTTT | 2 | 12 | 553019 | 553030 | 16.67 % | 66.67 % | 16.67 % | 0 % | Non-Coding |
50 | NC_017065 | TATTAA | 2 | 12 | 556466 | 556477 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
51 | NC_017065 | TATCAA | 2 | 12 | 567950 | 567961 | 50 % | 33.33 % | 0 % | 16.67 % | Non-Coding |
52 | NC_017065 | CAAAAA | 2 | 12 | 573170 | 573181 | 83.33 % | 0 % | 0 % | 16.67 % | Non-Coding |
53 | NC_017065 | AATATA | 2 | 12 | 587276 | 587287 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
54 | NC_017065 | GCTTGT | 2 | 12 | 601306 | 601317 | 0 % | 50 % | 33.33 % | 16.67 % | Non-Coding |
55 | NC_017065 | ACAAAA | 2 | 12 | 609903 | 609914 | 83.33 % | 0 % | 0 % | 16.67 % | Non-Coding |
56 | NC_017065 | TGCAAA | 2 | 12 | 612251 | 612262 | 50 % | 16.67 % | 16.67 % | 16.67 % | Non-Coding |
57 | NC_017065 | TATTAA | 2 | 12 | 622447 | 622458 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
58 | NC_017065 | TGCTAA | 2 | 12 | 624430 | 624441 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | Non-Coding |
59 | NC_017065 | TACAAT | 2 | 12 | 629877 | 629888 | 50 % | 33.33 % | 0 % | 16.67 % | Non-Coding |
60 | NC_017065 | AAAGCT | 2 | 12 | 632154 | 632165 | 50 % | 16.67 % | 16.67 % | 16.67 % | Non-Coding |
61 | NC_017065 | TGCTTC | 2 | 12 | 675605 | 675616 | 0 % | 50 % | 16.67 % | 33.33 % | Non-Coding |
62 | NC_017065 | TAAAAC | 2 | 12 | 676531 | 676542 | 66.67 % | 16.67 % | 0 % | 16.67 % | Non-Coding |
63 | NC_017065 | TAAACC | 2 | 12 | 689429 | 689440 | 50 % | 16.67 % | 0 % | 33.33 % | Non-Coding |
64 | NC_017065 | CTTCAA | 2 | 12 | 691126 | 691137 | 33.33 % | 33.33 % | 0 % | 33.33 % | Non-Coding |
65 | NC_017065 | ATTTAA | 2 | 12 | 691232 | 691243 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
66 | NC_017065 | ATAGAA | 2 | 12 | 718196 | 718207 | 66.67 % | 16.67 % | 16.67 % | 0 % | Non-Coding |
67 | NC_017065 | TATAAT | 2 | 12 | 735467 | 735478 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
68 | NC_017065 | TATATT | 2 | 12 | 750066 | 750077 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
69 | NC_017065 | CTTCAG | 2 | 12 | 754864 | 754875 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | Non-Coding |
70 | NC_017065 | ATATTT | 2 | 12 | 756519 | 756530 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
71 | NC_017065 | CTACTC | 2 | 12 | 766921 | 766932 | 16.67 % | 33.33 % | 0 % | 50 % | Non-Coding |
72 | NC_017065 | TATTTT | 2 | 12 | 772429 | 772440 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
73 | NC_017065 | ATTTTT | 2 | 12 | 791904 | 791915 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
74 | NC_017065 | TAAATC | 2 | 12 | 801293 | 801304 | 50 % | 33.33 % | 0 % | 16.67 % | Non-Coding |
75 | NC_017065 | AGGTGG | 2 | 12 | 801356 | 801367 | 16.67 % | 16.67 % | 66.67 % | 0 % | Non-Coding |
76 | NC_017065 | ATCGTC | 2 | 12 | 805695 | 805706 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | Non-Coding |
77 | NC_017065 | TATTTT | 2 | 12 | 847396 | 847407 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
78 | NC_017065 | TTAATA | 2 | 12 | 854309 | 854320 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
79 | NC_017065 | CTAAAC | 2 | 12 | 857743 | 857754 | 50 % | 16.67 % | 0 % | 33.33 % | Non-Coding |
80 | NC_017065 | ATTTAA | 2 | 12 | 863554 | 863565 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
81 | NC_017065 | TATTAA | 2 | 12 | 865216 | 865227 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
82 | NC_017065 | GATATA | 2 | 12 | 872665 | 872676 | 50 % | 33.33 % | 16.67 % | 0 % | Non-Coding |
83 | NC_017065 | TCTGAC | 2 | 12 | 882896 | 882907 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | Non-Coding |
84 | NC_017065 | AATATT | 2 | 12 | 897160 | 897171 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
85 | NC_017065 | TTCAAA | 2 | 12 | 920549 | 920560 | 50 % | 33.33 % | 0 % | 16.67 % | Non-Coding |
86 | NC_017065 | TAGCAC | 2 | 12 | 927818 | 927829 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | Non-Coding |
87 | NC_017065 | TTTATC | 2 | 12 | 951211 | 951222 | 16.67 % | 66.67 % | 0 % | 16.67 % | Non-Coding |
88 | NC_017065 | CCGATA | 2 | 12 | 951932 | 951943 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | Non-Coding |
89 | NC_017065 | ACAAAA | 2 | 12 | 956467 | 956478 | 83.33 % | 0 % | 0 % | 16.67 % | Non-Coding |
90 | NC_017065 | TAATTT | 2 | 12 | 968918 | 968929 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
91 | NC_017065 | TGCTCT | 2 | 12 | 970324 | 970335 | 0 % | 50 % | 16.67 % | 33.33 % | Non-Coding |
92 | NC_017065 | GCCATG | 2 | 12 | 977538 | 977549 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | Non-Coding |
93 | NC_017065 | TTTAAA | 2 | 12 | 984832 | 984843 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
94 | NC_017065 | ATTAGG | 2 | 12 | 990890 | 990901 | 33.33 % | 33.33 % | 33.33 % | 0 % | Non-Coding |
95 | NC_017065 | AATTAT | 2 | 12 | 993737 | 993748 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
96 | NC_017065 | ATCAAT | 2 | 12 | 994580 | 994591 | 50 % | 33.33 % | 0 % | 16.67 % | Non-Coding |
97 | NC_017065 | GTTAAT | 2 | 12 | 996816 | 996827 | 33.33 % | 50 % | 16.67 % | 0 % | Non-Coding |
98 | NC_017065 | TAATGA | 2 | 12 | 1000443 | 1000454 | 50 % | 33.33 % | 16.67 % | 0 % | Non-Coding |
99 | NC_017065 | TAAATT | 2 | 12 | 1011810 | 1011821 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
100 | NC_017065 | AATATG | 2 | 12 | 1026226 | 1026237 | 50 % | 33.33 % | 16.67 % | 0 % | Non-Coding |
101 | NC_017065 | TTAATA | 2 | 12 | 1034957 | 1034968 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
102 | NC_017065 | CAAGAA | 2 | 12 | 1035059 | 1035070 | 66.67 % | 0 % | 16.67 % | 16.67 % | Non-Coding |
103 | NC_017065 | CTTTAT | 2 | 12 | 1038866 | 1038877 | 16.67 % | 66.67 % | 0 % | 16.67 % | Non-Coding |
104 | NC_017065 | TTAAAT | 2 | 12 | 1047476 | 1047487 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
105 | NC_017065 | TTATAT | 2 | 12 | 1047684 | 1047695 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
106 | NC_017065 | TTAGTT | 2 | 12 | 1049351 | 1049362 | 16.67 % | 66.67 % | 16.67 % | 0 % | Non-Coding |
107 | NC_017065 | TAGTGA | 2 | 12 | 1050149 | 1050160 | 33.33 % | 33.33 % | 33.33 % | 0 % | Non-Coding |
108 | NC_017065 | CTTTTA | 2 | 12 | 1077873 | 1077884 | 16.67 % | 66.67 % | 0 % | 16.67 % | Non-Coding |
109 | NC_017065 | AGCTTA | 2 | 12 | 1089895 | 1089906 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | Non-Coding |
110 | NC_017065 | AGTTTA | 2 | 12 | 1089998 | 1090009 | 33.33 % | 50 % | 16.67 % | 0 % | Non-Coding |
111 | NC_017065 | ATACTA | 2 | 12 | 1098813 | 1098824 | 50 % | 33.33 % | 0 % | 16.67 % | Non-Coding |
112 | NC_017065 | AACACC | 2 | 12 | 1108248 | 1108259 | 50 % | 0 % | 0 % | 50 % | Non-Coding |
113 | NC_017065 | TCTAGT | 2 | 12 | 1112325 | 1112336 | 16.67 % | 50 % | 16.67 % | 16.67 % | Non-Coding |
114 | NC_017065 | TGTTCC | 2 | 12 | 1173102 | 1173113 | 0 % | 50 % | 16.67 % | 33.33 % | Non-Coding |
115 | NC_017065 | TCATTT | 2 | 12 | 1203465 | 1203476 | 16.67 % | 66.67 % | 0 % | 16.67 % | Non-Coding |
116 | NC_017065 | GCCCCA | 2 | 12 | 1210267 | 1210278 | 16.67 % | 0 % | 16.67 % | 66.67 % | Non-Coding |
117 | NC_017065 | CCTAAT | 2 | 12 | 1216348 | 1216359 | 33.33 % | 33.33 % | 0 % | 33.33 % | Non-Coding |
118 | NC_017065 | TCATTG | 2 | 12 | 1217790 | 1217801 | 16.67 % | 50 % | 16.67 % | 16.67 % | Non-Coding |
119 | NC_017065 | TTTATC | 2 | 12 | 1252384 | 1252395 | 16.67 % | 66.67 % | 0 % | 16.67 % | Non-Coding |
120 | NC_017065 | AAAAGA | 2 | 12 | 1267557 | 1267568 | 83.33 % | 0 % | 16.67 % | 0 % | Non-Coding |