MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Rahnella aquatilis HX2 plasmid PRA1

Total Repeats: 22

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_017060	GTTTTT	2	12	33725	33736	0 %	83.33 %	16.67 %	0 %	Non-Coding
2	NC_017060	GGAATT	2	12	92135	92146	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
3	NC_017060	ACGGCT	2	12	148348	148359	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
4	NC_017060	TTAATT	2	12	175218	175229	33.33 %	66.67 %	0 %	0 %	Non-Coding
5	NC_017060	CCACTC	2	12	192364	192375	16.67 %	16.67 %	0 %	66.67 %	Non-Coding
6	NC_017060	TCAAGG	2	12	199923	199934	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
7	NC_017060	TAAAAT	2	12	281450	281461	66.67 %	33.33 %	0 %	0 %	Non-Coding
8	NC_017060	TTTATT	2	12	293114	293125	16.67 %	83.33 %	0 %	0 %	Non-Coding
9	NC_017060	TCAGGA	2	12	294880	294891	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
10	NC_017060	TTATTT	2	12	299016	299027	16.67 %	83.33 %	0 %	0 %	Non-Coding
11	NC_017060	TATTGA	2	12	356515	356526	33.33 %	50 %	16.67 %	0 %	Non-Coding
12	NC_017060	AGTGTG	2	12	358508	358519	16.67 %	33.33 %	50 %	0 %	Non-Coding
13	NC_017060	CAGCGT	2	12	370738	370749	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
14	NC_017060	CAGGGC	2	12	371738	371749	16.67 %	0 %	50 %	33.33 %	Non-Coding
15	NC_017060	GCGCCA	2	12	390272	390283	16.67 %	0 %	33.33 %	50 %	Non-Coding
16	NC_017060	TCGGTT	2	12	408696	408707	0 %	50 %	33.33 %	16.67 %	Non-Coding
17	NC_017060	AATGAT	2	12	411454	411465	50 %	33.33 %	16.67 %	0 %	Non-Coding
18	NC_017060	AGGTAC	2	12	501082	501093	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
19	NC_017060	TTTCAT	2	12	545166	545177	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
20	NC_017060	CCCAAT	2	12	545432	545443	33.33 %	16.67 %	0 %	50 %	Non-Coding
21	NC_017060	GTTATT	2	12	553041	553052	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
22	NC_017060	TTGATC	2	12	553126	553137	16.67 %	50 %	16.67 %	16.67 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.