MICAS: Microsatellite Analysis Server 3.0

Tetra-nucleotide Non-Coding Repeats of Rickettsia rhipicephali str. 3-7-female6-CWPP plasmid pMCC_1

Total Repeats: 22

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_017055	ACAG	2	8	41	48	50 %	0 %	25 %	25 %	Non-Coding
2	NC_017055	AGAA	2	8	192	199	75 %	0 %	25 %	0 %	Non-Coding
3	NC_017055	AAGA	2	8	716	723	75 %	0 %	25 %	0 %	Non-Coding
4	NC_017055	GCGA	2	8	992	999	25 %	0 %	50 %	25 %	Non-Coding
5	NC_017055	AGCG	2	8	1265	1272	25 %	0 %	50 %	25 %	Non-Coding
6	NC_017055	GAAA	2	8	1367	1374	75 %	0 %	25 %	0 %	Non-Coding
7	NC_017055	AGCA	2	8	1891	1898	50 %	0 %	25 %	25 %	Non-Coding
8	NC_017055	AAAG	2	8	2043	2050	75 %	0 %	25 %	0 %	Non-Coding
9	NC_017055	TTAT	2	8	5462	5469	25 %	75 %	0 %	0 %	Non-Coding
10	NC_017055	TATT	2	8	5921	5928	25 %	75 %	0 %	0 %	Non-Coding
11	NC_017055	AAAG	2	8	6046	6053	75 %	0 %	25 %	0 %	Non-Coding
12	NC_017055	AAAT	2	8	6065	6072	75 %	25 %	0 %	0 %	Non-Coding
13	NC_017055	TTAA	2	8	6450	6457	50 %	50 %	0 %	0 %	Non-Coding
14	NC_017055	TACC	2	8	8675	8682	25 %	25 %	0 %	50 %	Non-Coding
15	NC_017055	TACA	2	8	8969	8976	50 %	25 %	0 %	25 %	Non-Coding
16	NC_017055	ATTT	2	8	9751	9758	25 %	75 %	0 %	0 %	Non-Coding
17	NC_017055	ACAT	2	8	12859	12866	50 %	25 %	0 %	25 %	Non-Coding
18	NC_017055	ACAT	2	8	13957	13964	50 %	25 %	0 %	25 %	Non-Coding
19	NC_017055	ACAT	2	8	13995	14002	50 %	25 %	0 %	25 %	Non-Coding
20	NC_017055	TTGA	2	8	14347	14354	25 %	50 %	25 %	0 %	Non-Coding
21	NC_017055	AATC	2	8	14528	14535	50 %	25 %	0 %	25 %	Non-Coding
22	NC_017055	ATCT	2	8	14665	14672	25 %	50 %	0 %	25 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.