Tri-nucleotide Coding Repeats of Rickettsia rhipicephali str. 3-7-female6-CWPP plasmid pMCC_1
Total Repeats: 145
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_017055 | ATC | 2 | 6 | 2460 | 2465 | 33.33 % | 33.33 % | 0 % | 33.33 % | 381356296 |
2 | NC_017055 | TTC | 2 | 6 | 2508 | 2513 | 0 % | 66.67 % | 0 % | 33.33 % | 381356296 |
3 | NC_017055 | TAT | 2 | 6 | 2525 | 2530 | 33.33 % | 66.67 % | 0 % | 0 % | 381356296 |
4 | NC_017055 | CAT | 2 | 6 | 2612 | 2617 | 33.33 % | 33.33 % | 0 % | 33.33 % | 381356296 |
5 | NC_017055 | AAT | 2 | 6 | 2618 | 2623 | 66.67 % | 33.33 % | 0 % | 0 % | 381356296 |
6 | NC_017055 | ATT | 2 | 6 | 2754 | 2759 | 33.33 % | 66.67 % | 0 % | 0 % | 381356296 |
7 | NC_017055 | TCA | 2 | 6 | 2849 | 2854 | 33.33 % | 33.33 % | 0 % | 33.33 % | 381356296 |
8 | NC_017055 | TTC | 2 | 6 | 2856 | 2861 | 0 % | 66.67 % | 0 % | 33.33 % | 381356296 |
9 | NC_017055 | TCA | 2 | 6 | 2881 | 2886 | 33.33 % | 33.33 % | 0 % | 33.33 % | 381356296 |
10 | NC_017055 | TAA | 2 | 6 | 2906 | 2911 | 66.67 % | 33.33 % | 0 % | 0 % | 381356296 |
11 | NC_017055 | TCT | 2 | 6 | 2937 | 2942 | 0 % | 66.67 % | 0 % | 33.33 % | 381356296 |
12 | NC_017055 | ACT | 2 | 6 | 2964 | 2969 | 33.33 % | 33.33 % | 0 % | 33.33 % | 381356296 |
13 | NC_017055 | TGT | 2 | 6 | 2978 | 2983 | 0 % | 66.67 % | 33.33 % | 0 % | 381356296 |
14 | NC_017055 | TAT | 2 | 6 | 2987 | 2992 | 33.33 % | 66.67 % | 0 % | 0 % | 381356296 |
15 | NC_017055 | AAT | 2 | 6 | 3022 | 3027 | 66.67 % | 33.33 % | 0 % | 0 % | 381356296 |
16 | NC_017055 | TAC | 2 | 6 | 3035 | 3040 | 33.33 % | 33.33 % | 0 % | 33.33 % | 381356296 |
17 | NC_017055 | TGT | 2 | 6 | 3047 | 3052 | 0 % | 66.67 % | 33.33 % | 0 % | 381356296 |
18 | NC_017055 | TAT | 2 | 6 | 3056 | 3061 | 33.33 % | 66.67 % | 0 % | 0 % | 381356296 |
19 | NC_017055 | AAT | 2 | 6 | 3091 | 3096 | 66.67 % | 33.33 % | 0 % | 0 % | 381356296 |
20 | NC_017055 | TAC | 2 | 6 | 3104 | 3109 | 33.33 % | 33.33 % | 0 % | 33.33 % | 381356296 |
21 | NC_017055 | TGT | 2 | 6 | 3116 | 3121 | 0 % | 66.67 % | 33.33 % | 0 % | 381356296 |
22 | NC_017055 | TAT | 2 | 6 | 3125 | 3130 | 33.33 % | 66.67 % | 0 % | 0 % | 381356296 |
23 | NC_017055 | AAT | 2 | 6 | 3160 | 3165 | 66.67 % | 33.33 % | 0 % | 0 % | 381356296 |
24 | NC_017055 | TAC | 2 | 6 | 3173 | 3178 | 33.33 % | 33.33 % | 0 % | 33.33 % | 381356296 |
25 | NC_017055 | TGT | 2 | 6 | 3185 | 3190 | 0 % | 66.67 % | 33.33 % | 0 % | 381356296 |
26 | NC_017055 | TAT | 2 | 6 | 3194 | 3199 | 33.33 % | 66.67 % | 0 % | 0 % | 381356296 |
27 | NC_017055 | AAT | 2 | 6 | 3229 | 3234 | 66.67 % | 33.33 % | 0 % | 0 % | 381356296 |
28 | NC_017055 | TAC | 2 | 6 | 3242 | 3247 | 33.33 % | 33.33 % | 0 % | 33.33 % | 381356296 |
29 | NC_017055 | TGT | 2 | 6 | 3254 | 3259 | 0 % | 66.67 % | 33.33 % | 0 % | 381356296 |
30 | NC_017055 | TAT | 2 | 6 | 3263 | 3268 | 33.33 % | 66.67 % | 0 % | 0 % | 381356296 |
31 | NC_017055 | AAT | 2 | 6 | 3298 | 3303 | 66.67 % | 33.33 % | 0 % | 0 % | 381356296 |
32 | NC_017055 | TAC | 2 | 6 | 3311 | 3316 | 33.33 % | 33.33 % | 0 % | 33.33 % | 381356296 |
33 | NC_017055 | TGT | 2 | 6 | 3323 | 3328 | 0 % | 66.67 % | 33.33 % | 0 % | 381356296 |
34 | NC_017055 | TAT | 2 | 6 | 3332 | 3337 | 33.33 % | 66.67 % | 0 % | 0 % | 381356296 |
35 | NC_017055 | AAT | 2 | 6 | 3367 | 3372 | 66.67 % | 33.33 % | 0 % | 0 % | 381356296 |
36 | NC_017055 | TAC | 2 | 6 | 3380 | 3385 | 33.33 % | 33.33 % | 0 % | 33.33 % | 381356296 |
37 | NC_017055 | TGT | 2 | 6 | 3392 | 3397 | 0 % | 66.67 % | 33.33 % | 0 % | 381356296 |
38 | NC_017055 | TAT | 2 | 6 | 3401 | 3406 | 33.33 % | 66.67 % | 0 % | 0 % | 381356296 |
39 | NC_017055 | AAT | 2 | 6 | 3436 | 3441 | 66.67 % | 33.33 % | 0 % | 0 % | 381356296 |
40 | NC_017055 | CTA | 2 | 6 | 3499 | 3504 | 33.33 % | 33.33 % | 0 % | 33.33 % | 381356296 |
41 | NC_017055 | GGA | 2 | 6 | 3505 | 3510 | 33.33 % | 0 % | 66.67 % | 0 % | 381356296 |
42 | NC_017055 | ATT | 2 | 6 | 3525 | 3530 | 33.33 % | 66.67 % | 0 % | 0 % | 381356296 |
43 | NC_017055 | GTA | 2 | 6 | 3607 | 3612 | 33.33 % | 33.33 % | 33.33 % | 0 % | 381356296 |
44 | NC_017055 | ATG | 2 | 6 | 3651 | 3656 | 33.33 % | 33.33 % | 33.33 % | 0 % | 381356296 |
45 | NC_017055 | TTA | 2 | 6 | 3676 | 3681 | 33.33 % | 66.67 % | 0 % | 0 % | 381356296 |
46 | NC_017055 | GAT | 2 | 6 | 3736 | 3741 | 33.33 % | 33.33 % | 33.33 % | 0 % | 381356296 |
47 | NC_017055 | TAT | 2 | 6 | 3794 | 3799 | 33.33 % | 66.67 % | 0 % | 0 % | 381356296 |
48 | NC_017055 | CTT | 2 | 6 | 3810 | 3815 | 0 % | 66.67 % | 0 % | 33.33 % | 381356296 |
49 | NC_017055 | ATA | 2 | 6 | 3984 | 3989 | 66.67 % | 33.33 % | 0 % | 0 % | 381356296 |
50 | NC_017055 | TAT | 2 | 6 | 4056 | 4061 | 33.33 % | 66.67 % | 0 % | 0 % | 381356296 |
51 | NC_017055 | TAG | 2 | 6 | 4112 | 4117 | 33.33 % | 33.33 % | 33.33 % | 0 % | 381356296 |
52 | NC_017055 | TAC | 2 | 6 | 4121 | 4126 | 33.33 % | 33.33 % | 0 % | 33.33 % | 381356296 |
53 | NC_017055 | ATT | 2 | 6 | 4185 | 4190 | 33.33 % | 66.67 % | 0 % | 0 % | 381356296 |
54 | NC_017055 | TAT | 2 | 6 | 4302 | 4307 | 33.33 % | 66.67 % | 0 % | 0 % | 381356296 |
55 | NC_017055 | ATT | 2 | 6 | 4329 | 4334 | 33.33 % | 66.67 % | 0 % | 0 % | 381356296 |
56 | NC_017055 | TAA | 2 | 6 | 4349 | 4354 | 66.67 % | 33.33 % | 0 % | 0 % | 381356296 |
57 | NC_017055 | ATA | 2 | 6 | 4383 | 4388 | 66.67 % | 33.33 % | 0 % | 0 % | 381356296 |
58 | NC_017055 | ATA | 2 | 6 | 4453 | 4458 | 66.67 % | 33.33 % | 0 % | 0 % | 381356296 |
59 | NC_017055 | TAA | 2 | 6 | 4592 | 4597 | 66.67 % | 33.33 % | 0 % | 0 % | 381356296 |
60 | NC_017055 | ATT | 2 | 6 | 4801 | 4806 | 33.33 % | 66.67 % | 0 % | 0 % | 381356296 |
61 | NC_017055 | TAA | 2 | 6 | 4812 | 4817 | 66.67 % | 33.33 % | 0 % | 0 % | 381356296 |
62 | NC_017055 | TTA | 2 | 6 | 4829 | 4834 | 33.33 % | 66.67 % | 0 % | 0 % | 381356296 |
63 | NC_017055 | TTC | 2 | 6 | 4959 | 4964 | 0 % | 66.67 % | 0 % | 33.33 % | 381356296 |
64 | NC_017055 | TAA | 2 | 6 | 5033 | 5038 | 66.67 % | 33.33 % | 0 % | 0 % | 381356296 |
65 | NC_017055 | TTA | 2 | 6 | 5095 | 5100 | 33.33 % | 66.67 % | 0 % | 0 % | 381356296 |
66 | NC_017055 | ATG | 2 | 6 | 5157 | 5162 | 33.33 % | 33.33 % | 33.33 % | 0 % | 381356296 |
67 | NC_017055 | ATG | 2 | 6 | 5203 | 5208 | 33.33 % | 33.33 % | 33.33 % | 0 % | 381356296 |
68 | NC_017055 | CTT | 2 | 6 | 5678 | 5683 | 0 % | 66.67 % | 0 % | 33.33 % | 381356297 |
69 | NC_017055 | TGC | 2 | 6 | 5706 | 5711 | 0 % | 33.33 % | 33.33 % | 33.33 % | 381356297 |
70 | NC_017055 | CAC | 2 | 6 | 5757 | 5762 | 33.33 % | 0 % | 0 % | 66.67 % | 381356297 |
71 | NC_017055 | TCT | 2 | 6 | 5801 | 5806 | 0 % | 66.67 % | 0 % | 33.33 % | 381356297 |
72 | NC_017055 | GGC | 2 | 6 | 6619 | 6624 | 0 % | 0 % | 66.67 % | 33.33 % | 381356298 |
73 | NC_017055 | AAG | 2 | 6 | 6627 | 6632 | 66.67 % | 0 % | 33.33 % | 0 % | 381356298 |
74 | NC_017055 | AAG | 2 | 6 | 6919 | 6924 | 66.67 % | 0 % | 33.33 % | 0 % | 381356298 |
75 | NC_017055 | ATT | 2 | 6 | 7331 | 7336 | 33.33 % | 66.67 % | 0 % | 0 % | 381356299 |
76 | NC_017055 | TCA | 2 | 6 | 7419 | 7424 | 33.33 % | 33.33 % | 0 % | 33.33 % | 381356299 |
77 | NC_017055 | TAC | 2 | 6 | 7591 | 7596 | 33.33 % | 33.33 % | 0 % | 33.33 % | 381356299 |
78 | NC_017055 | CAT | 2 | 6 | 7670 | 7675 | 33.33 % | 33.33 % | 0 % | 33.33 % | 381356299 |
79 | NC_017055 | TCA | 3 | 9 | 7701 | 7709 | 33.33 % | 33.33 % | 0 % | 33.33 % | 381356299 |
80 | NC_017055 | CAA | 2 | 6 | 7726 | 7731 | 66.67 % | 0 % | 0 % | 33.33 % | 381356299 |
81 | NC_017055 | AAT | 2 | 6 | 7779 | 7784 | 66.67 % | 33.33 % | 0 % | 0 % | 381356299 |
82 | NC_017055 | TAC | 2 | 6 | 7829 | 7834 | 33.33 % | 33.33 % | 0 % | 33.33 % | 381356299 |
83 | NC_017055 | TGT | 2 | 6 | 7873 | 7878 | 0 % | 66.67 % | 33.33 % | 0 % | 381356299 |
84 | NC_017055 | ATA | 2 | 6 | 7909 | 7914 | 66.67 % | 33.33 % | 0 % | 0 % | 381356299 |
85 | NC_017055 | GCA | 2 | 6 | 7915 | 7920 | 33.33 % | 0 % | 33.33 % | 33.33 % | 381356299 |
86 | NC_017055 | ACT | 2 | 6 | 7955 | 7960 | 33.33 % | 33.33 % | 0 % | 33.33 % | 381356299 |
87 | NC_017055 | ACA | 2 | 6 | 8061 | 8066 | 66.67 % | 0 % | 0 % | 33.33 % | 381356299 |
88 | NC_017055 | AAT | 2 | 6 | 8161 | 8166 | 66.67 % | 33.33 % | 0 % | 0 % | 381356299 |
89 | NC_017055 | AGC | 2 | 6 | 8183 | 8188 | 33.33 % | 0 % | 33.33 % | 33.33 % | 381356299 |
90 | NC_017055 | TCA | 2 | 6 | 8220 | 8225 | 33.33 % | 33.33 % | 0 % | 33.33 % | 381356299 |
91 | NC_017055 | TGT | 2 | 6 | 8271 | 8276 | 0 % | 66.67 % | 33.33 % | 0 % | 381356299 |
92 | NC_017055 | TAT | 2 | 6 | 8431 | 8436 | 33.33 % | 66.67 % | 0 % | 0 % | 381356300 |
93 | NC_017055 | TCA | 2 | 6 | 8502 | 8507 | 33.33 % | 33.33 % | 0 % | 33.33 % | 381356300 |
94 | NC_017055 | GCT | 2 | 6 | 8515 | 8520 | 0 % | 33.33 % | 33.33 % | 33.33 % | 381356300 |
95 | NC_017055 | CAC | 2 | 6 | 8530 | 8535 | 33.33 % | 0 % | 0 % | 66.67 % | 381356300 |
96 | NC_017055 | TGT | 2 | 6 | 8561 | 8566 | 0 % | 66.67 % | 33.33 % | 0 % | 381356300 |
97 | NC_017055 | AGA | 2 | 6 | 8597 | 8602 | 66.67 % | 0 % | 33.33 % | 0 % | 381356300 |
98 | NC_017055 | GAT | 2 | 6 | 9266 | 9271 | 33.33 % | 33.33 % | 33.33 % | 0 % | 381356301 |
99 | NC_017055 | AGC | 2 | 6 | 9305 | 9310 | 33.33 % | 0 % | 33.33 % | 33.33 % | 381356301 |
100 | NC_017055 | TTG | 2 | 6 | 9663 | 9668 | 0 % | 66.67 % | 33.33 % | 0 % | 381356302 |
101 | NC_017055 | ATC | 2 | 6 | 10085 | 10090 | 33.33 % | 33.33 % | 0 % | 33.33 % | 381356303 |
102 | NC_017055 | ATG | 2 | 6 | 10091 | 10096 | 33.33 % | 33.33 % | 33.33 % | 0 % | 381356303 |
103 | NC_017055 | TGG | 2 | 6 | 10130 | 10135 | 0 % | 33.33 % | 66.67 % | 0 % | 381356303 |
104 | NC_017055 | GAA | 2 | 6 | 10512 | 10517 | 66.67 % | 0 % | 33.33 % | 0 % | 381356303 |
105 | NC_017055 | CTA | 2 | 6 | 10545 | 10550 | 33.33 % | 33.33 % | 0 % | 33.33 % | 381356303 |
106 | NC_017055 | CAG | 2 | 6 | 10588 | 10593 | 33.33 % | 0 % | 33.33 % | 33.33 % | 381356303 |
107 | NC_017055 | TAT | 2 | 6 | 10702 | 10707 | 33.33 % | 66.67 % | 0 % | 0 % | 381356303 |
108 | NC_017055 | TAT | 2 | 6 | 10753 | 10758 | 33.33 % | 66.67 % | 0 % | 0 % | 381356303 |
109 | NC_017055 | AGA | 2 | 6 | 10813 | 10818 | 66.67 % | 0 % | 33.33 % | 0 % | 381356303 |
110 | NC_017055 | GTG | 2 | 6 | 10836 | 10841 | 0 % | 33.33 % | 66.67 % | 0 % | 381356303 |
111 | NC_017055 | TTA | 2 | 6 | 10842 | 10847 | 33.33 % | 66.67 % | 0 % | 0 % | 381356303 |
112 | NC_017055 | CTT | 2 | 6 | 10864 | 10869 | 0 % | 66.67 % | 0 % | 33.33 % | 381356303 |
113 | NC_017055 | GCA | 2 | 6 | 10870 | 10875 | 33.33 % | 0 % | 33.33 % | 33.33 % | 381356303 |
114 | NC_017055 | TGT | 2 | 6 | 10934 | 10939 | 0 % | 66.67 % | 33.33 % | 0 % | 381356303 |
115 | NC_017055 | CAT | 2 | 6 | 10951 | 10956 | 33.33 % | 33.33 % | 0 % | 33.33 % | 381356303 |
116 | NC_017055 | AAT | 2 | 6 | 11028 | 11033 | 66.67 % | 33.33 % | 0 % | 0 % | 381356303 |
117 | NC_017055 | TAT | 2 | 6 | 11083 | 11088 | 33.33 % | 66.67 % | 0 % | 0 % | 381356303 |
118 | NC_017055 | ATA | 2 | 6 | 11264 | 11269 | 66.67 % | 33.33 % | 0 % | 0 % | 381356303 |
119 | NC_017055 | ACA | 2 | 6 | 11301 | 11306 | 66.67 % | 0 % | 0 % | 33.33 % | 381356303 |
120 | NC_017055 | TAC | 2 | 6 | 11320 | 11325 | 33.33 % | 33.33 % | 0 % | 33.33 % | 381356303 |
121 | NC_017055 | TGG | 2 | 6 | 11682 | 11687 | 0 % | 33.33 % | 66.67 % | 0 % | 381356304 |
122 | NC_017055 | CTT | 3 | 9 | 11690 | 11698 | 0 % | 66.67 % | 0 % | 33.33 % | 381356304 |
123 | NC_017055 | ACA | 2 | 6 | 12432 | 12437 | 66.67 % | 0 % | 0 % | 33.33 % | 381356305 |
124 | NC_017055 | CTA | 2 | 6 | 12473 | 12478 | 33.33 % | 33.33 % | 0 % | 33.33 % | 381356305 |
125 | NC_017055 | ATC | 2 | 6 | 12517 | 12522 | 33.33 % | 33.33 % | 0 % | 33.33 % | 381356305 |
126 | NC_017055 | TAA | 2 | 6 | 12642 | 12647 | 66.67 % | 33.33 % | 0 % | 0 % | 381356305 |
127 | NC_017055 | TTA | 2 | 6 | 12749 | 12754 | 33.33 % | 66.67 % | 0 % | 0 % | 381356305 |
128 | NC_017055 | ATA | 2 | 6 | 12767 | 12772 | 66.67 % | 33.33 % | 0 % | 0 % | 381356305 |
129 | NC_017055 | ATT | 2 | 6 | 12809 | 12814 | 33.33 % | 66.67 % | 0 % | 0 % | 381356305 |
130 | NC_017055 | ATT | 2 | 6 | 13059 | 13064 | 33.33 % | 66.67 % | 0 % | 0 % | 381356306 |
131 | NC_017055 | GCC | 2 | 6 | 13089 | 13094 | 0 % | 0 % | 33.33 % | 66.67 % | 381356306 |
132 | NC_017055 | TTC | 2 | 6 | 13118 | 13123 | 0 % | 66.67 % | 0 % | 33.33 % | 381356306 |
133 | NC_017055 | TGT | 2 | 6 | 13161 | 13166 | 0 % | 66.67 % | 33.33 % | 0 % | 381356306 |
134 | NC_017055 | AGT | 2 | 6 | 13208 | 13213 | 33.33 % | 33.33 % | 33.33 % | 0 % | 381356306 |
135 | NC_017055 | TAT | 2 | 6 | 13338 | 13343 | 33.33 % | 66.67 % | 0 % | 0 % | 381356307 |
136 | NC_017055 | GCT | 2 | 6 | 13370 | 13375 | 0 % | 33.33 % | 33.33 % | 33.33 % | 381356307 |
137 | NC_017055 | CTT | 2 | 6 | 13539 | 13544 | 0 % | 66.67 % | 0 % | 33.33 % | 381356307 |
138 | NC_017055 | TAC | 2 | 6 | 13606 | 13611 | 33.33 % | 33.33 % | 0 % | 33.33 % | 381356307 |
139 | NC_017055 | CAT | 2 | 6 | 13644 | 13649 | 33.33 % | 33.33 % | 0 % | 33.33 % | 381356307 |
140 | NC_017055 | TGG | 2 | 6 | 13657 | 13662 | 0 % | 33.33 % | 66.67 % | 0 % | 381356307 |
141 | NC_017055 | AAT | 2 | 6 | 13669 | 13674 | 66.67 % | 33.33 % | 0 % | 0 % | 381356307 |
142 | NC_017055 | TAT | 2 | 6 | 13717 | 13722 | 33.33 % | 66.67 % | 0 % | 0 % | 381356307 |
143 | NC_017055 | CCT | 2 | 6 | 13883 | 13888 | 0 % | 33.33 % | 0 % | 66.67 % | 381356307 |
144 | NC_017055 | ATA | 2 | 6 | 13913 | 13918 | 66.67 % | 33.33 % | 0 % | 0 % | 381356307 |
145 | NC_017055 | GAA | 2 | 6 | 14129 | 14134 | 66.67 % | 0 % | 33.33 % | 0 % | 381356308 |