MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Candidatus Rickettsia amblyommii str. GAT-30V plasmid pMCE_2

Total Repeats: 62

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_017029	TCT	2	6	72	77	0 %	66.67 %	0 %	33.33 %	Non-Coding
2	NC_017029	CTT	2	6	365	370	0 %	66.67 %	0 %	33.33 %	Non-Coding
3	NC_017029	TGA	2	6	454	459	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
4	NC_017029	TAA	2	6	596	601	66.67 %	33.33 %	0 %	0 %	Non-Coding
5	NC_017029	TTA	2	6	640	645	33.33 %	66.67 %	0 %	0 %	Non-Coding
6	NC_017029	GAA	2	6	875	880	66.67 %	0 %	33.33 %	0 %	Non-Coding
7	NC_017029	TTA	2	6	942	947	33.33 %	66.67 %	0 %	0 %	Non-Coding
8	NC_017029	CAG	2	6	1149	1154	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
9	NC_017029	AGA	2	6	1180	1185	66.67 %	0 %	33.33 %	0 %	Non-Coding
10	NC_017029	AGT	2	6	1258	1263	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
11	NC_017029	ACT	2	6	1413	1418	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
12	NC_017029	CCT	2	6	1444	1449	0 %	33.33 %	0 %	66.67 %	Non-Coding
13	NC_017029	TTG	2	6	1459	1464	0 %	66.67 %	33.33 %	0 %	Non-Coding
14	NC_017029	TTA	2	6	5422	5427	33.33 %	66.67 %	0 %	0 %	Non-Coding
15	NC_017029	TAT	2	6	5975	5980	33.33 %	66.67 %	0 %	0 %	Non-Coding
16	NC_017029	TAC	2	6	6620	6625	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
17	NC_017029	TGA	2	6	6660	6665	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
18	NC_017029	TAA	2	6	6705	6710	66.67 %	33.33 %	0 %	0 %	Non-Coding
19	NC_017029	ATT	2	6	7640	7645	33.33 %	66.67 %	0 %	0 %	Non-Coding
20	NC_017029	ATA	2	6	7659	7664	66.67 %	33.33 %	0 %	0 %	Non-Coding
21	NC_017029	ATT	2	6	7764	7769	33.33 %	66.67 %	0 %	0 %	Non-Coding
22	NC_017029	ATT	2	6	7786	7791	33.33 %	66.67 %	0 %	0 %	Non-Coding
23	NC_017029	ATA	2	6	8127	8132	66.67 %	33.33 %	0 %	0 %	Non-Coding
24	NC_017029	TCC	2	6	10634	10639	0 %	33.33 %	0 %	66.67 %	Non-Coding
25	NC_017029	AAG	2	6	10656	10661	66.67 %	0 %	33.33 %	0 %	Non-Coding
26	NC_017029	TAA	2	6	10674	10679	66.67 %	33.33 %	0 %	0 %	Non-Coding
27	NC_017029	GAA	2	6	10928	10933	66.67 %	0 %	33.33 %	0 %	Non-Coding
28	NC_017029	AAG	3	9	10997	11005	66.67 %	0 %	33.33 %	0 %	Non-Coding
29	NC_017029	ATC	2	6	11008	11013	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
30	NC_017029	GAT	2	6	11018	11023	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
31	NC_017029	AAT	2	6	11055	11060	66.67 %	33.33 %	0 %	0 %	Non-Coding
32	NC_017029	GAA	2	6	11284	11289	66.67 %	0 %	33.33 %	0 %	Non-Coding
33	NC_017029	ATA	2	6	11654	11659	66.67 %	33.33 %	0 %	0 %	Non-Coding
34	NC_017029	GGT	2	6	11683	11688	0 %	33.33 %	66.67 %	0 %	Non-Coding
35	NC_017029	GGC	2	6	11715	11720	0 %	0 %	66.67 %	33.33 %	Non-Coding
36	NC_017029	TTA	2	6	11736	11741	33.33 %	66.67 %	0 %	0 %	Non-Coding
37	NC_017029	TTA	2	6	11900	11905	33.33 %	66.67 %	0 %	0 %	Non-Coding
38	NC_017029	TTA	2	6	13168	13173	33.33 %	66.67 %	0 %	0 %	Non-Coding
39	NC_017029	CAT	2	6	13227	13232	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
40	NC_017029	ATT	2	6	13260	13265	33.33 %	66.67 %	0 %	0 %	Non-Coding
41	NC_017029	ATT	2	6	13280	13285	33.33 %	66.67 %	0 %	0 %	Non-Coding
42	NC_017029	TAA	2	6	13348	13353	66.67 %	33.33 %	0 %	0 %	Non-Coding
43	NC_017029	TGG	2	6	13435	13440	0 %	33.33 %	66.67 %	0 %	Non-Coding
44	NC_017029	CTT	3	9	13443	13451	0 %	66.67 %	0 %	33.33 %	Non-Coding
45	NC_017029	TGT	2	6	13563	13568	0 %	66.67 %	33.33 %	0 %	Non-Coding
46	NC_017029	ACT	2	6	13871	13876	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
47	NC_017029	TAA	2	6	14014	14019	66.67 %	33.33 %	0 %	0 %	Non-Coding
48	NC_017029	GGA	2	6	14139	14144	33.33 %	0 %	66.67 %	0 %	Non-Coding
49	NC_017029	ATA	2	6	14158	14163	66.67 %	33.33 %	0 %	0 %	Non-Coding
50	NC_017029	TAC	2	6	14766	14771	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
51	NC_017029	TTC	2	6	16454	16459	0 %	66.67 %	0 %	33.33 %	Non-Coding
52	NC_017029	TTC	2	6	16655	16660	0 %	66.67 %	0 %	33.33 %	Non-Coding
53	NC_017029	TAC	2	6	16674	16679	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
54	NC_017029	GCA	2	6	16938	16943	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
55	NC_017029	CAT	2	6	16969	16974	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
56	NC_017029	ACT	2	6	16988	16993	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
57	NC_017029	TAG	2	6	17038	17043	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
58	NC_017029	TGC	2	6	17072	17077	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
59	NC_017029	CAA	2	6	17430	17435	66.67 %	0 %	0 %	33.33 %	Non-Coding
60	NC_017029	TAA	2	6	17447	17452	66.67 %	33.33 %	0 %	0 %	Non-Coding
61	NC_017029	CGT	2	6	17679	17684	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
62	NC_017029	AAG	2	6	17692	17697	66.67 %	0 %	33.33 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.