MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Candidatus Rickettsia amblyommii str. GAT-30V plasmid pMCE_3

Total Repeats: 131

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_017021	TTG	2	6	1225	1230	0 %	66.67 %	33.33 %	0 %	Non-Coding
2	NC_017021	GAT	2	6	1236	1241	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
3	NC_017021	AAG	2	6	1294	1299	66.67 %	0 %	33.33 %	0 %	Non-Coding
4	NC_017021	AGA	3	9	1343	1351	66.67 %	0 %	33.33 %	0 %	Non-Coding
5	NC_017021	AAG	2	6	1416	1421	66.67 %	0 %	33.33 %	0 %	Non-Coding
6	NC_017021	TAA	2	6	3071	3076	66.67 %	33.33 %	0 %	0 %	Non-Coding
7	NC_017021	ATA	2	6	3787	3792	66.67 %	33.33 %	0 %	0 %	Non-Coding
8	NC_017021	ATC	2	6	3795	3800	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
9	NC_017021	TAA	2	6	3855	3860	66.67 %	33.33 %	0 %	0 %	Non-Coding
10	NC_017021	ATA	2	6	3912	3917	66.67 %	33.33 %	0 %	0 %	Non-Coding
11	NC_017021	AGA	2	6	4173	4178	66.67 %	0 %	33.33 %	0 %	Non-Coding
12	NC_017021	TAT	2	6	5319	5324	33.33 %	66.67 %	0 %	0 %	Non-Coding
13	NC_017021	TCA	2	6	5390	5395	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
14	NC_017021	GCT	2	6	5403	5408	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
15	NC_017021	TGA	2	6	5423	5428	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
16	NC_017021	AGA	2	6	5486	5491	66.67 %	0 %	33.33 %	0 %	Non-Coding
17	NC_017021	TAC	2	6	5546	5551	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
18	NC_017021	ATA	2	6	5616	5621	66.67 %	33.33 %	0 %	0 %	Non-Coding
19	NC_017021	TAT	2	6	5625	5630	33.33 %	66.67 %	0 %	0 %	Non-Coding
20	NC_017021	TGC	2	6	5737	5742	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
21	NC_017021	TGA	2	6	5767	5772	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
22	NC_017021	TCT	2	6	5807	5812	0 %	66.67 %	0 %	33.33 %	Non-Coding
23	NC_017021	TGC	2	6	5868	5873	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
24	NC_017021	CTA	2	6	5875	5880	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
25	NC_017021	ACC	2	6	5886	5891	33.33 %	0 %	0 %	66.67 %	Non-Coding
26	NC_017021	TTG	2	6	5936	5941	0 %	66.67 %	33.33 %	0 %	Non-Coding
27	NC_017021	TGT	2	6	5969	5974	0 %	66.67 %	33.33 %	0 %	Non-Coding
28	NC_017021	TAG	2	6	6181	6186	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
29	NC_017021	CTG	2	6	6206	6211	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
30	NC_017021	TTC	2	6	6232	6237	0 %	66.67 %	0 %	33.33 %	Non-Coding
31	NC_017021	ATG	2	6	6336	6341	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
32	NC_017021	AAT	2	6	6470	6475	66.67 %	33.33 %	0 %	0 %	Non-Coding
33	NC_017021	CAG	2	6	7303	7308	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
34	NC_017021	GCC	2	6	7316	7321	0 %	0 %	33.33 %	66.67 %	Non-Coding
35	NC_017021	CTT	2	6	7529	7534	0 %	66.67 %	0 %	33.33 %	Non-Coding
36	NC_017021	TCT	2	6	7539	7544	0 %	66.67 %	0 %	33.33 %	Non-Coding
37	NC_017021	TTG	2	6	7545	7550	0 %	66.67 %	33.33 %	0 %	Non-Coding
38	NC_017021	TAC	2	6	7559	7564	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
39	NC_017021	AAT	2	6	8011	8016	66.67 %	33.33 %	0 %	0 %	Non-Coding
40	NC_017021	GTT	2	6	8058	8063	0 %	66.67 %	33.33 %	0 %	Non-Coding
41	NC_017021	TTA	2	6	8075	8080	33.33 %	66.67 %	0 %	0 %	Non-Coding
42	NC_017021	TGA	2	6	8215	8220	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
43	NC_017021	ACT	2	6	8800	8805	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
44	NC_017021	CTG	2	6	8818	8823	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
45	NC_017021	TTA	2	6	8869	8874	33.33 %	66.67 %	0 %	0 %	Non-Coding
46	NC_017021	AAC	2	6	8902	8907	66.67 %	0 %	0 %	33.33 %	Non-Coding
47	NC_017021	AGC	2	6	8923	8928	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
48	NC_017021	TAA	2	6	8989	8994	66.67 %	33.33 %	0 %	0 %	Non-Coding
49	NC_017021	GAA	2	6	9537	9542	66.67 %	0 %	33.33 %	0 %	Non-Coding
50	NC_017021	TAT	2	6	9573	9578	33.33 %	66.67 %	0 %	0 %	Non-Coding
51	NC_017021	AAT	2	6	9605	9610	66.67 %	33.33 %	0 %	0 %	Non-Coding
52	NC_017021	AGA	2	6	9659	9664	66.67 %	0 %	33.33 %	0 %	Non-Coding
53	NC_017021	AGG	2	6	9670	9675	33.33 %	0 %	66.67 %	0 %	Non-Coding
54	NC_017021	ATT	2	6	9703	9708	33.33 %	66.67 %	0 %	0 %	Non-Coding
55	NC_017021	ACA	2	6	9767	9772	66.67 %	0 %	0 %	33.33 %	Non-Coding
56	NC_017021	GCT	2	6	9786	9791	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
57	NC_017021	ACT	2	6	9886	9891	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
58	NC_017021	TAA	2	6	10491	10496	66.67 %	33.33 %	0 %	0 %	Non-Coding
59	NC_017021	TAT	2	6	10497	10502	33.33 %	66.67 %	0 %	0 %	Non-Coding
60	NC_017021	TAC	2	6	10519	10524	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
61	NC_017021	TCT	2	6	11616	11621	0 %	66.67 %	0 %	33.33 %	Non-Coding
62	NC_017021	CTA	2	6	11661	11666	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
63	NC_017021	CTT	2	6	11703	11708	0 %	66.67 %	0 %	33.33 %	Non-Coding
64	NC_017021	CTA	2	6	11718	11723	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
65	NC_017021	TAG	2	6	11734	11739	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
66	NC_017021	ATA	2	6	11838	11843	66.67 %	33.33 %	0 %	0 %	Non-Coding
67	NC_017021	GAA	2	6	13961	13966	66.67 %	0 %	33.33 %	0 %	Non-Coding
68	NC_017021	ATA	2	6	13988	13993	66.67 %	33.33 %	0 %	0 %	Non-Coding
69	NC_017021	TAC	2	6	14012	14017	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
70	NC_017021	CTA	2	6	14115	14120	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
71	NC_017021	TCT	2	6	14192	14197	0 %	66.67 %	0 %	33.33 %	Non-Coding
72	NC_017021	TAA	2	6	14296	14301	66.67 %	33.33 %	0 %	0 %	Non-Coding
73	NC_017021	TTC	2	6	14302	14307	0 %	66.67 %	0 %	33.33 %	Non-Coding
74	NC_017021	ATT	2	6	14323	14328	33.33 %	66.67 %	0 %	0 %	Non-Coding
75	NC_017021	TCA	3	9	14342	14350	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
76	NC_017021	ATC	2	6	14699	14704	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
77	NC_017021	ATT	2	6	14918	14923	33.33 %	66.67 %	0 %	0 %	Non-Coding
78	NC_017021	TTA	2	6	15325	15330	33.33 %	66.67 %	0 %	0 %	Non-Coding
79	NC_017021	TTA	2	6	15815	15820	33.33 %	66.67 %	0 %	0 %	Non-Coding
80	NC_017021	TTA	2	6	15890	15895	33.33 %	66.67 %	0 %	0 %	Non-Coding
81	NC_017021	TCA	2	6	16026	16031	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
82	NC_017021	TAT	2	6	16094	16099	33.33 %	66.67 %	0 %	0 %	Non-Coding
83	NC_017021	TAC	2	6	16198	16203	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
84	NC_017021	CAT	2	6	16277	16282	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
85	NC_017021	CTT	2	6	16292	16297	0 %	66.67 %	0 %	33.33 %	Non-Coding
86	NC_017021	TCA	3	9	16308	16316	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
87	NC_017021	CAA	2	6	16333	16338	66.67 %	0 %	0 %	33.33 %	Non-Coding
88	NC_017021	AAT	2	6	16386	16391	66.67 %	33.33 %	0 %	0 %	Non-Coding
89	NC_017021	TTA	2	6	16422	16427	33.33 %	66.67 %	0 %	0 %	Non-Coding
90	NC_017021	TAC	2	6	16436	16441	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
91	NC_017021	CTA	2	6	16560	16565	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
92	NC_017021	AGT	2	6	16613	16618	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
93	NC_017021	ATT	2	6	16631	16636	33.33 %	66.67 %	0 %	0 %	Non-Coding
94	NC_017021	ACA	2	6	16659	16664	66.67 %	0 %	0 %	33.33 %	Non-Coding
95	NC_017021	AAT	2	6	16759	16764	66.67 %	33.33 %	0 %	0 %	Non-Coding
96	NC_017021	AGC	2	6	16781	16786	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
97	NC_017021	TCA	2	6	16818	16823	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
98	NC_017021	ATT	2	6	16871	16876	33.33 %	66.67 %	0 %	0 %	Non-Coding
99	NC_017021	AGT	2	6	16892	16897	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
100	NC_017021	TAC	2	6	16910	16915	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
101	NC_017021	TTA	2	6	16963	16968	33.33 %	66.67 %	0 %	0 %	Non-Coding
102	NC_017021	CTG	2	6	17276	17281	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
103	NC_017021	CAT	2	6	17282	17287	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
104	NC_017021	ATC	2	6	17288	17293	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
105	NC_017021	ATA	2	6	17415	17420	66.67 %	33.33 %	0 %	0 %	Non-Coding
106	NC_017021	AGC	2	6	17555	17560	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
107	NC_017021	ATT	3	9	17571	17579	33.33 %	66.67 %	0 %	0 %	Non-Coding
108	NC_017021	CAG	2	6	18020	18025	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
109	NC_017021	TAC	2	6	18063	18068	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
110	NC_017021	CTA	2	6	18070	18075	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
111	NC_017021	GTT	2	6	18136	18141	0 %	66.67 %	33.33 %	0 %	Non-Coding
112	NC_017021	TAA	2	6	18205	18210	66.67 %	33.33 %	0 %	0 %	Non-Coding
113	NC_017021	AAT	2	6	18252	18257	66.67 %	33.33 %	0 %	0 %	Non-Coding
114	NC_017021	GGT	2	6	18349	18354	0 %	33.33 %	66.67 %	0 %	Non-Coding
115	NC_017021	TTA	2	6	18355	18360	33.33 %	66.67 %	0 %	0 %	Non-Coding
116	NC_017021	TAT	2	6	18361	18366	33.33 %	66.67 %	0 %	0 %	Non-Coding
117	NC_017021	ATA	2	6	18402	18407	66.67 %	33.33 %	0 %	0 %	Non-Coding
118	NC_017021	ATT	2	6	18423	18428	33.33 %	66.67 %	0 %	0 %	Non-Coding
119	NC_017021	AAC	2	6	18517	18522	66.67 %	0 %	0 %	33.33 %	Non-Coding
120	NC_017021	AAG	2	6	21013	21018	66.67 %	0 %	33.33 %	0 %	Non-Coding
121	NC_017021	AAG	2	6	21332	21337	66.67 %	0 %	33.33 %	0 %	Non-Coding
122	NC_017021	TTA	2	6	21361	21366	33.33 %	66.67 %	0 %	0 %	Non-Coding
123	NC_017021	TAT	2	6	22398	22403	33.33 %	66.67 %	0 %	0 %	Non-Coding
124	NC_017021	ATA	2	6	22444	22449	66.67 %	33.33 %	0 %	0 %	Non-Coding
125	NC_017021	ACC	2	6	22451	22456	33.33 %	0 %	0 %	66.67 %	Non-Coding
126	NC_017021	ATT	3	9	22555	22563	33.33 %	66.67 %	0 %	0 %	Non-Coding
127	NC_017021	ATT	2	6	22601	22606	33.33 %	66.67 %	0 %	0 %	Non-Coding
128	NC_017021	AAC	2	6	22670	22675	66.67 %	0 %	0 %	33.33 %	Non-Coding
129	NC_017021	ACT	2	6	22788	22793	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
130	NC_017021	AGC	2	6	22802	22807	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
131	NC_017021	CTA	2	6	22819	22824	33.33 %	33.33 %	0 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.