MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Streptomyces hygroscopicus subsp. jinggangensis 5008 plasmid pSHJG2

Total Repeats: 180

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_016972	GCT	2	6	1641	1646	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
2	NC_016972	TCC	2	6	1685	1690	0 %	33.33 %	0 %	66.67 %	Non-Coding
3	NC_016972	TAC	2	6	1699	1704	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
4	NC_016972	GCT	2	6	1786	1791	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
5	NC_016972	TGC	2	6	1813	1818	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
6	NC_016972	CGT	2	6	1953	1958	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
7	NC_016972	TGG	2	6	2033	2038	0 %	33.33 %	66.67 %	0 %	Non-Coding
8	NC_016972	CTG	2	6	2310	2315	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
9	NC_016972	CGG	2	6	2351	2356	0 %	0 %	66.67 %	33.33 %	Non-Coding
10	NC_016972	TGG	2	6	2365	2370	0 %	33.33 %	66.67 %	0 %	Non-Coding
11	NC_016972	CAG	2	6	2415	2420	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
12	NC_016972	GGA	2	6	2764	2769	33.33 %	0 %	66.67 %	0 %	Non-Coding
13	NC_016972	ATG	2	6	4686	4691	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
14	NC_016972	GGA	2	6	4870	4875	33.33 %	0 %	66.67 %	0 %	Non-Coding
15	NC_016972	CCT	2	6	4916	4921	0 %	33.33 %	0 %	66.67 %	Non-Coding
16	NC_016972	TCC	2	6	5111	5116	0 %	33.33 %	0 %	66.67 %	Non-Coding
17	NC_016972	GTG	2	6	5169	5174	0 %	33.33 %	66.67 %	0 %	Non-Coding
18	NC_016972	GCC	2	6	5402	5407	0 %	0 %	33.33 %	66.67 %	Non-Coding
19	NC_016972	GCC	2	6	5457	5462	0 %	0 %	33.33 %	66.67 %	Non-Coding
20	NC_016972	ACC	2	6	5518	5523	33.33 %	0 %	0 %	66.67 %	Non-Coding
21	NC_016972	GCT	2	6	5561	5566	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
22	NC_016972	TCC	2	6	5644	5649	0 %	33.33 %	0 %	66.67 %	Non-Coding
23	NC_016972	GAG	2	6	5771	5776	33.33 %	0 %	66.67 %	0 %	Non-Coding
24	NC_016972	CCA	2	6	6870	6875	33.33 %	0 %	0 %	66.67 %	Non-Coding
25	NC_016972	TGG	2	6	6899	6904	0 %	33.33 %	66.67 %	0 %	Non-Coding
26	NC_016972	CGA	2	6	6961	6966	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
27	NC_016972	CTG	2	6	7014	7019	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
28	NC_016972	TCC	2	6	7074	7079	0 %	33.33 %	0 %	66.67 %	Non-Coding
29	NC_016972	GGC	2	6	7112	7117	0 %	0 %	66.67 %	33.33 %	Non-Coding
30	NC_016972	GTC	2	6	7165	7170	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
31	NC_016972	CAG	2	6	8225	8230	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
32	NC_016972	ACG	2	6	9424	9429	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
33	NC_016972	AGC	2	6	10462	10467	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
34	NC_016972	GCC	2	6	10495	10500	0 %	0 %	33.33 %	66.67 %	Non-Coding
35	NC_016972	GCT	2	6	10630	10635	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
36	NC_016972	CGG	2	6	11415	11420	0 %	0 %	66.67 %	33.33 %	Non-Coding
37	NC_016972	CCG	2	6	11449	11454	0 %	0 %	33.33 %	66.67 %	Non-Coding
38	NC_016972	CGG	2	6	11488	11493	0 %	0 %	66.67 %	33.33 %	Non-Coding
39	NC_016972	GTT	2	6	12496	12501	0 %	66.67 %	33.33 %	0 %	Non-Coding
40	NC_016972	AGT	2	6	12564	12569	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
41	NC_016972	CCT	2	6	14030	14035	0 %	33.33 %	0 %	66.67 %	Non-Coding
42	NC_016972	GCT	2	6	14036	14041	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
43	NC_016972	AGG	2	6	14069	14074	33.33 %	0 %	66.67 %	0 %	Non-Coding
44	NC_016972	ACA	2	6	14154	14159	66.67 %	0 %	0 %	33.33 %	Non-Coding
45	NC_016972	GGC	2	6	16358	16363	0 %	0 %	66.67 %	33.33 %	Non-Coding
46	NC_016972	GTC	2	6	16471	16476	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
47	NC_016972	GGC	2	6	16584	16589	0 %	0 %	66.67 %	33.33 %	Non-Coding
48	NC_016972	CGG	3	9	16593	16601	0 %	0 %	66.67 %	33.33 %	Non-Coding
49	NC_016972	AGC	2	6	16840	16845	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
50	NC_016972	GCG	2	6	16850	16855	0 %	0 %	66.67 %	33.33 %	Non-Coding
51	NC_016972	GCC	2	6	17025	17030	0 %	0 %	33.33 %	66.67 %	Non-Coding
52	NC_016972	CAG	2	6	17534	17539	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
53	NC_016972	CGG	2	6	17668	17673	0 %	0 %	66.67 %	33.33 %	Non-Coding
54	NC_016972	CGG	2	6	17682	17687	0 %	0 %	66.67 %	33.33 %	Non-Coding
55	NC_016972	CTC	2	6	18174	18179	0 %	33.33 %	0 %	66.67 %	Non-Coding
56	NC_016972	CGG	2	6	19764	19769	0 %	0 %	66.67 %	33.33 %	Non-Coding
57	NC_016972	TCG	2	6	19834	19839	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
58	NC_016972	CTC	2	6	19854	19859	0 %	33.33 %	0 %	66.67 %	Non-Coding
59	NC_016972	CAG	2	6	19881	19886	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
60	NC_016972	CGT	2	6	19979	19984	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
61	NC_016972	CGT	2	6	20006	20011	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
62	NC_016972	CGT	2	6	20021	20026	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
63	NC_016972	CCA	2	6	20030	20035	33.33 %	0 %	0 %	66.67 %	Non-Coding
64	NC_016972	TGC	2	6	20086	20091	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
65	NC_016972	ACG	2	6	25380	25385	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
66	NC_016972	GAC	2	6	25391	25396	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
67	NC_016972	GGC	2	6	25397	25402	0 %	0 %	66.67 %	33.33 %	Non-Coding
68	NC_016972	GAC	2	6	25430	25435	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
69	NC_016972	GGC	2	6	25460	25465	0 %	0 %	66.67 %	33.33 %	Non-Coding
70	NC_016972	ACG	3	9	25467	25475	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
71	NC_016972	TGG	2	6	25477	25482	0 %	33.33 %	66.67 %	0 %	Non-Coding
72	NC_016972	GAG	2	6	25493	25498	33.33 %	0 %	66.67 %	0 %	Non-Coding
73	NC_016972	GGC	2	6	25550	25555	0 %	0 %	66.67 %	33.33 %	Non-Coding
74	NC_016972	CGG	2	6	25597	25602	0 %	0 %	66.67 %	33.33 %	Non-Coding
75	NC_016972	GAA	2	6	25928	25933	66.67 %	0 %	33.33 %	0 %	Non-Coding
76	NC_016972	TCC	2	6	29176	29181	0 %	33.33 %	0 %	66.67 %	Non-Coding
77	NC_016972	GCA	2	6	32359	32364	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
78	NC_016972	CGG	3	9	34735	34743	0 %	0 %	66.67 %	33.33 %	Non-Coding
79	NC_016972	GGT	2	6	39875	39880	0 %	33.33 %	66.67 %	0 %	Non-Coding
80	NC_016972	GAT	2	6	39884	39889	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
81	NC_016972	CTG	2	6	39916	39921	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
82	NC_016972	TCA	2	6	39967	39972	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
83	NC_016972	CGG	2	6	40047	40052	0 %	0 %	66.67 %	33.33 %	Non-Coding
84	NC_016972	GGC	2	6	40125	40130	0 %	0 %	66.67 %	33.33 %	Non-Coding
85	NC_016972	CGG	2	6	40163	40168	0 %	0 %	66.67 %	33.33 %	Non-Coding
86	NC_016972	CGA	2	6	40169	40174	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
87	NC_016972	CCG	2	6	40184	40189	0 %	0 %	33.33 %	66.67 %	Non-Coding
88	NC_016972	GTC	2	6	40278	40283	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
89	NC_016972	CGG	2	6	40380	40385	0 %	0 %	66.67 %	33.33 %	Non-Coding
90	NC_016972	ACG	2	6	40462	40467	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
91	NC_016972	CGG	2	6	40695	40700	0 %	0 %	66.67 %	33.33 %	Non-Coding
92	NC_016972	CGG	2	6	41225	41230	0 %	0 %	66.67 %	33.33 %	Non-Coding
93	NC_016972	CGC	2	6	41243	41248	0 %	0 %	33.33 %	66.67 %	Non-Coding
94	NC_016972	TTG	2	6	44113	44118	0 %	66.67 %	33.33 %	0 %	Non-Coding
95	NC_016972	CGG	2	6	44120	44125	0 %	0 %	66.67 %	33.33 %	Non-Coding
96	NC_016972	GTG	2	6	47690	47695	0 %	33.33 %	66.67 %	0 %	Non-Coding
97	NC_016972	TCA	2	6	47748	47753	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
98	NC_016972	ACC	2	6	47870	47875	33.33 %	0 %	0 %	66.67 %	Non-Coding
99	NC_016972	GAC	2	6	47876	47881	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
100	NC_016972	CTC	2	6	47885	47890	0 %	33.33 %	0 %	66.67 %	Non-Coding
101	NC_016972	CAC	2	6	47938	47943	33.33 %	0 %	0 %	66.67 %	Non-Coding
102	NC_016972	GCA	2	6	47950	47955	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
103	NC_016972	GCT	2	6	47956	47961	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
104	NC_016972	CGG	2	6	47980	47985	0 %	0 %	66.67 %	33.33 %	Non-Coding
105	NC_016972	CGG	2	6	48017	48022	0 %	0 %	66.67 %	33.33 %	Non-Coding
106	NC_016972	CCG	2	6	48088	48093	0 %	0 %	33.33 %	66.67 %	Non-Coding
107	NC_016972	TCG	2	6	48218	48223	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
108	NC_016972	CTG	2	6	48504	48509	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
109	NC_016972	CGC	2	6	48526	48531	0 %	0 %	33.33 %	66.67 %	Non-Coding
110	NC_016972	CGG	3	9	48861	48869	0 %	0 %	66.67 %	33.33 %	Non-Coding
111	NC_016972	GGT	2	6	48956	48961	0 %	33.33 %	66.67 %	0 %	Non-Coding
112	NC_016972	CGG	2	6	50106	50111	0 %	0 %	66.67 %	33.33 %	Non-Coding
113	NC_016972	GCC	2	6	50136	50141	0 %	0 %	33.33 %	66.67 %	Non-Coding
114	NC_016972	GTG	2	6	50142	50147	0 %	33.33 %	66.67 %	0 %	Non-Coding
115	NC_016972	GAC	2	6	51398	51403	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
116	NC_016972	GCA	3	9	51503	51511	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
117	NC_016972	CGG	2	6	53791	53796	0 %	0 %	66.67 %	33.33 %	Non-Coding
118	NC_016972	TGG	2	6	53969	53974	0 %	33.33 %	66.67 %	0 %	Non-Coding
119	NC_016972	GTT	2	6	54006	54011	0 %	66.67 %	33.33 %	0 %	Non-Coding
120	NC_016972	CGT	2	6	54063	54068	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
121	NC_016972	GCC	2	6	54074	54079	0 %	0 %	33.33 %	66.67 %	Non-Coding
122	NC_016972	GCG	2	6	56749	56754	0 %	0 %	66.67 %	33.33 %	Non-Coding
123	NC_016972	GGT	2	6	56884	56889	0 %	33.33 %	66.67 %	0 %	Non-Coding
124	NC_016972	GAC	2	6	56910	56915	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
125	NC_016972	GAC	2	6	56960	56965	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
126	NC_016972	GCA	2	6	56968	56973	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
127	NC_016972	CGA	2	6	57007	57012	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
128	NC_016972	GTG	2	6	57062	57067	0 %	33.33 %	66.67 %	0 %	Non-Coding
129	NC_016972	GGC	2	6	57099	57104	0 %	0 %	66.67 %	33.33 %	Non-Coding
130	NC_016972	TGC	2	6	57120	57125	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
131	NC_016972	GCG	2	6	57126	57131	0 %	0 %	66.67 %	33.33 %	Non-Coding
132	NC_016972	CCA	2	6	59372	59377	33.33 %	0 %	0 %	66.67 %	Non-Coding
133	NC_016972	CGC	2	6	59423	59428	0 %	0 %	33.33 %	66.67 %	Non-Coding
134	NC_016972	GCT	2	6	60544	60549	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
135	NC_016972	GGT	2	6	60581	60586	0 %	33.33 %	66.67 %	0 %	Non-Coding
136	NC_016972	GGC	2	6	60601	60606	0 %	0 %	66.67 %	33.33 %	Non-Coding
137	NC_016972	CAC	2	6	60612	60617	33.33 %	0 %	0 %	66.67 %	Non-Coding
138	NC_016972	ACG	2	6	60816	60821	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
139	NC_016972	CAC	2	6	60920	60925	33.33 %	0 %	0 %	66.67 %	Non-Coding
140	NC_016972	CCG	2	6	60926	60931	0 %	0 %	33.33 %	66.67 %	Non-Coding
141	NC_016972	ACG	2	6	60987	60992	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
142	NC_016972	GCG	2	6	61039	61044	0 %	0 %	66.67 %	33.33 %	Non-Coding
143	NC_016972	GCT	2	6	61062	61067	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
144	NC_016972	GTG	2	6	62108	62113	0 %	33.33 %	66.67 %	0 %	Non-Coding
145	NC_016972	GCT	2	6	62114	62119	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
146	NC_016972	GCG	2	6	62141	62146	0 %	0 %	66.67 %	33.33 %	Non-Coding
147	NC_016972	GGT	2	6	62584	62589	0 %	33.33 %	66.67 %	0 %	Non-Coding
148	NC_016972	ACG	2	6	65412	65417	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
149	NC_016972	CGC	2	6	66949	66954	0 %	0 %	33.33 %	66.67 %	Non-Coding
150	NC_016972	GCG	2	6	67691	67696	0 %	0 %	66.67 %	33.33 %	Non-Coding
151	NC_016972	GGC	2	6	67760	67765	0 %	0 %	66.67 %	33.33 %	Non-Coding
152	NC_016972	CAC	2	6	67785	67790	33.33 %	0 %	0 %	66.67 %	Non-Coding
153	NC_016972	GTC	2	6	67835	67840	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
154	NC_016972	CCG	2	6	67915	67920	0 %	0 %	33.33 %	66.67 %	Non-Coding
155	NC_016972	CGG	3	9	67939	67947	0 %	0 %	66.67 %	33.33 %	Non-Coding
156	NC_016972	GGT	2	6	67973	67978	0 %	33.33 %	66.67 %	0 %	Non-Coding
157	NC_016972	CGG	2	6	68439	68444	0 %	0 %	66.67 %	33.33 %	Non-Coding
158	NC_016972	GCA	2	6	68489	68494	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
159	NC_016972	GGC	2	6	68527	68532	0 %	0 %	66.67 %	33.33 %	Non-Coding
160	NC_016972	CGG	2	6	68596	68601	0 %	0 %	66.67 %	33.33 %	Non-Coding
161	NC_016972	GGC	2	6	68633	68638	0 %	0 %	66.67 %	33.33 %	Non-Coding
162	NC_016972	CGG	2	6	68737	68742	0 %	0 %	66.67 %	33.33 %	Non-Coding
163	NC_016972	TCA	2	6	69422	69427	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
164	NC_016972	CAC	2	6	69458	69463	33.33 %	0 %	0 %	66.67 %	Non-Coding
165	NC_016972	TTG	2	6	70036	70041	0 %	66.67 %	33.33 %	0 %	Non-Coding
166	NC_016972	TTC	2	6	70048	70053	0 %	66.67 %	0 %	33.33 %	Non-Coding
167	NC_016972	CTG	2	6	70070	70075	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
168	NC_016972	GGA	2	6	70097	70102	33.33 %	0 %	66.67 %	0 %	Non-Coding
169	NC_016972	TTC	2	6	70121	70126	0 %	66.67 %	0 %	33.33 %	Non-Coding
170	NC_016972	CTC	2	6	70747	70752	0 %	33.33 %	0 %	66.67 %	Non-Coding
171	NC_016972	GCG	2	6	71438	71443	0 %	0 %	66.67 %	33.33 %	Non-Coding
172	NC_016972	GTG	2	6	71470	71475	0 %	33.33 %	66.67 %	0 %	Non-Coding
173	NC_016972	GGC	2	6	71561	71566	0 %	0 %	66.67 %	33.33 %	Non-Coding
174	NC_016972	GCC	2	6	71651	71656	0 %	0 %	33.33 %	66.67 %	Non-Coding
175	NC_016972	GCG	2	6	71681	71686	0 %	0 %	66.67 %	33.33 %	Non-Coding
176	NC_016972	GGC	2	6	71727	71732	0 %	0 %	66.67 %	33.33 %	Non-Coding
177	NC_016972	CCG	2	6	71772	71777	0 %	0 %	33.33 %	66.67 %	Non-Coding
178	NC_016972	GCG	2	6	73187	73192	0 %	0 %	66.67 %	33.33 %	Non-Coding
179	NC_016972	TGC	2	6	73254	73259	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
180	NC_016972	CCA	2	6	73270	73275	33.33 %	0 %	0 %	66.67 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.