MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Mycobacterium intracellulare MOTT-64 chromosome

Total Repeats: 116

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_016948	TGAAGG	2	12	2053	2064	33.33 %	16.67 %	50 %	0 %	Non-Coding
2	NC_016948	CCCGGC	2	12	4452	4463	0 %	0 %	33.33 %	66.67 %	Non-Coding
3	NC_016948	GCGTCG	2	12	208743	208754	0 %	16.67 %	50 %	33.33 %	Non-Coding
4	NC_016948	GGGTCG	2	12	219403	219414	0 %	16.67 %	66.67 %	16.67 %	Non-Coding
5	NC_016948	CCGCCA	2	12	289447	289458	16.67 %	0 %	16.67 %	66.67 %	Non-Coding
6	NC_016948	CAGCGA	2	12	292318	292329	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
7	NC_016948	TCGGCT	2	12	329634	329645	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
8	NC_016948	AGGGAA	2	12	396908	396919	50 %	0 %	50 %	0 %	Non-Coding
9	NC_016948	CGGCGA	2	12	410260	410271	16.67 %	0 %	50 %	33.33 %	Non-Coding
10	NC_016948	GTCAGC	2	12	425444	425455	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
11	NC_016948	GGGACT	2	12	431659	431670	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
12	NC_016948	GCGGCT	2	12	602006	602017	0 %	16.67 %	50 %	33.33 %	Non-Coding
13	NC_016948	CGGGCG	2	12	672020	672031	0 %	0 %	66.67 %	33.33 %	Non-Coding
14	NC_016948	CATCGA	2	12	693480	693491	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
15	NC_016948	ACGAGA	2	12	739895	739906	50 %	0 %	33.33 %	16.67 %	Non-Coding
16	NC_016948	ACGATG	2	12	812425	812436	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
17	NC_016948	GTCGAC	2	12	838012	838023	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
18	NC_016948	TCGGGT	2	12	867079	867090	0 %	33.33 %	50 %	16.67 %	Non-Coding
19	NC_016948	CGGCCG	2	12	884903	884914	0 %	0 %	50 %	50 %	Non-Coding
20	NC_016948	CGATCC	2	12	933734	933745	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
21	NC_016948	CGGCAC	2	12	940988	940999	16.67 %	0 %	33.33 %	50 %	Non-Coding
22	NC_016948	CGGCGA	2	12	1055875	1055886	16.67 %	0 %	50 %	33.33 %	Non-Coding
23	NC_016948	CCGTCG	2	12	1094064	1094075	0 %	16.67 %	33.33 %	50 %	Non-Coding
24	NC_016948	GCCCTC	2	12	1193967	1193978	0 %	16.67 %	16.67 %	66.67 %	Non-Coding
25	NC_016948	AATGAG	2	12	1289156	1289167	50 %	16.67 %	33.33 %	0 %	Non-Coding
26	NC_016948	GCCCGG	2	12	1334065	1334076	0 %	0 %	50 %	50 %	Non-Coding
27	NC_016948	TCTGCA	2	12	1375231	1375242	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
28	NC_016948	GTTTGC	2	12	1377736	1377747	0 %	50 %	33.33 %	16.67 %	Non-Coding
29	NC_016948	GACCGT	2	12	1522801	1522812	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
30	NC_016948	CCGTCG	2	12	1553491	1553502	0 %	16.67 %	33.33 %	50 %	Non-Coding
31	NC_016948	CCCCGG	2	12	1609629	1609640	0 %	0 %	33.33 %	66.67 %	Non-Coding
32	NC_016948	CTCCGG	2	12	1609671	1609682	0 %	16.67 %	33.33 %	50 %	Non-Coding
33	NC_016948	CCGGCG	2	12	1664034	1664045	0 %	0 %	50 %	50 %	Non-Coding
34	NC_016948	ACACTG	2	12	1695759	1695770	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
35	NC_016948	TGCGGC	2	12	1708623	1708634	0 %	16.67 %	50 %	33.33 %	Non-Coding
36	NC_016948	TCGTGC	2	12	1721013	1721024	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
37	NC_016948	GCCTCG	2	12	1721127	1721138	0 %	16.67 %	33.33 %	50 %	Non-Coding
38	NC_016948	GTTGCG	2	12	1798608	1798619	0 %	33.33 %	50 %	16.67 %	Non-Coding
39	NC_016948	GCAATT	2	12	1814238	1814249	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
40	NC_016948	GCCCAG	2	12	1934905	1934916	16.67 %	0 %	33.33 %	50 %	Non-Coding
41	NC_016948	ACCGAG	2	12	1982334	1982345	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
42	NC_016948	CCGGCC	2	12	2004222	2004233	0 %	0 %	33.33 %	66.67 %	Non-Coding
43	NC_016948	GAGCGG	2	12	2084661	2084672	16.67 %	0 %	66.67 %	16.67 %	Non-Coding
44	NC_016948	CAGCGC	2	12	2105476	2105487	16.67 %	0 %	33.33 %	50 %	Non-Coding
45	NC_016948	CGGGCC	2	12	2125503	2125514	0 %	0 %	50 %	50 %	Non-Coding
46	NC_016948	GTTGCG	2	12	2125583	2125594	0 %	33.33 %	50 %	16.67 %	Non-Coding
47	NC_016948	CAAGTT	2	12	2143275	2143286	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
48	NC_016948	CGCTGG	2	12	2259159	2259170	0 %	16.67 %	50 %	33.33 %	Non-Coding
49	NC_016948	TAACTC	2	12	2309522	2309533	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
50	NC_016948	GGTTGA	2	12	2309537	2309548	16.67 %	33.33 %	50 %	0 %	Non-Coding
51	NC_016948	GCGGTG	2	12	2366989	2367000	0 %	16.67 %	66.67 %	16.67 %	Non-Coding
52	NC_016948	ACCAGA	2	12	2460773	2460784	50 %	0 %	16.67 %	33.33 %	Non-Coding
53	NC_016948	CCGCTG	2	12	2534446	2534457	0 %	16.67 %	33.33 %	50 %	Non-Coding
54	NC_016948	GCCACC	2	12	2565217	2565228	16.67 %	0 %	16.67 %	66.67 %	Non-Coding
55	NC_016948	ACCGCG	2	12	2591408	2591419	16.67 %	0 %	33.33 %	50 %	Non-Coding
56	NC_016948	CGCGGC	2	12	2592256	2592267	0 %	0 %	50 %	50 %	Non-Coding
57	NC_016948	GTTTCG	2	12	2604962	2604973	0 %	50 %	33.33 %	16.67 %	Non-Coding
58	NC_016948	CCCTCT	2	12	2712757	2712768	0 %	33.33 %	0 %	66.67 %	Non-Coding
59	NC_016948	ATCGAG	2	12	2818865	2818876	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
60	NC_016948	AATCTG	2	12	2833870	2833881	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
61	NC_016948	GATCGC	2	12	2847397	2847408	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
62	NC_016948	CAAGAT	2	12	2930339	2930350	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
63	NC_016948	CGTCGG	2	12	2943253	2943264	0 %	16.67 %	50 %	33.33 %	Non-Coding
64	NC_016948	GACCAC	2	12	2943791	2943802	33.33 %	0 %	16.67 %	50 %	Non-Coding
65	NC_016948	CCGACG	2	12	2994594	2994605	16.67 %	0 %	33.33 %	50 %	Non-Coding
66	NC_016948	CGGCCG	2	12	3151432	3151443	0 %	0 %	50 %	50 %	Non-Coding
67	NC_016948	GTGGGA	2	12	3214000	3214011	16.67 %	16.67 %	66.67 %	0 %	Non-Coding
68	NC_016948	GAGGAC	2	12	3239212	3239223	33.33 %	0 %	50 %	16.67 %	Non-Coding
69	NC_016948	CGCGCC	2	12	3281302	3281313	0 %	0 %	33.33 %	66.67 %	Non-Coding
70	NC_016948	ACGGCG	2	12	3304550	3304561	16.67 %	0 %	50 %	33.33 %	Non-Coding
71	NC_016948	GCGACG	2	12	3406258	3406269	16.67 %	0 %	50 %	33.33 %	Non-Coding
72	NC_016948	GATTGA	2	12	3407178	3407189	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
73	NC_016948	GTGGCG	2	12	3502983	3502994	0 %	16.67 %	66.67 %	16.67 %	Non-Coding
74	NC_016948	CGGCGC	2	12	3734486	3734497	0 %	0 %	50 %	50 %	Non-Coding
75	NC_016948	CGGTTC	2	12	3734963	3734974	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
76	NC_016948	CACCCG	2	12	3755471	3755482	16.67 %	0 %	16.67 %	66.67 %	Non-Coding
77	NC_016948	GGCGCG	2	12	3783952	3783963	0 %	0 %	66.67 %	33.33 %	Non-Coding
78	NC_016948	CGACAT	2	12	3784944	3784955	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
79	NC_016948	CATCGC	2	12	3815171	3815182	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
80	NC_016948	CCGAGT	2	12	3832958	3832969	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
81	NC_016948	CGGGCG	2	12	3898045	3898056	0 %	0 %	66.67 %	33.33 %	Non-Coding
82	NC_016948	CAGGGC	2	12	3913560	3913571	16.67 %	0 %	50 %	33.33 %	Non-Coding
83	NC_016948	GGCGTG	2	12	3979405	3979416	0 %	16.67 %	66.67 %	16.67 %	Non-Coding
84	NC_016948	CCGTCA	2	12	4027360	4027371	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
85	NC_016948	CGTGCT	2	12	4253900	4253911	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
86	NC_016948	CACCGC	2	12	4304476	4304487	16.67 %	0 %	16.67 %	66.67 %	Non-Coding
87	NC_016948	TGGCGG	2	12	4421879	4421890	0 %	16.67 %	66.67 %	16.67 %	Non-Coding
88	NC_016948	GCGCGG	2	12	4460640	4460651	0 %	0 %	66.67 %	33.33 %	Non-Coding
89	NC_016948	CGGCGA	2	12	4523561	4523572	16.67 %	0 %	50 %	33.33 %	Non-Coding
90	NC_016948	CGGCGA	2	12	4523618	4523629	16.67 %	0 %	50 %	33.33 %	Non-Coding
91	NC_016948	CGGCGA	2	12	4523675	4523686	16.67 %	0 %	50 %	33.33 %	Non-Coding
92	NC_016948	CGGCGA	2	12	4523732	4523743	16.67 %	0 %	50 %	33.33 %	Non-Coding
93	NC_016948	TCGATG	2	12	4596796	4596807	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
94	NC_016948	TGTTCG	2	12	4717697	4717708	0 %	50 %	33.33 %	16.67 %	Non-Coding
95	NC_016948	TTGTCG	2	12	4725549	4725560	0 %	50 %	33.33 %	16.67 %	Non-Coding
96	NC_016948	AGGAGC	2	12	4759029	4759040	33.33 %	0 %	50 %	16.67 %	Non-Coding
97	NC_016948	GGGCGA	2	12	4774981	4774992	16.67 %	0 %	66.67 %	16.67 %	Non-Coding
98	NC_016948	CGCGTC	2	12	4777286	4777297	0 %	16.67 %	33.33 %	50 %	Non-Coding
99	NC_016948	CGGCAC	2	12	4851233	4851244	16.67 %	0 %	33.33 %	50 %	Non-Coding
100	NC_016948	TACTGG	2	12	4881058	4881069	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
101	NC_016948	GCCCCT	2	12	4903975	4903986	0 %	16.67 %	16.67 %	66.67 %	Non-Coding
102	NC_016948	AACGGG	2	12	4908571	4908582	33.33 %	0 %	50 %	16.67 %	Non-Coding
103	NC_016948	CCTGTG	2	12	5054576	5054587	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
104	NC_016948	CGTCGC	2	12	5061599	5061610	0 %	16.67 %	33.33 %	50 %	Non-Coding
105	NC_016948	AACGCG	2	12	5074539	5074550	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
106	NC_016948	TCATTT	2	12	5111426	5111437	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
107	NC_016948	GAATCT	2	12	5123399	5123410	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
108	NC_016948	GTCGGG	2	12	5153076	5153087	0 %	16.67 %	66.67 %	16.67 %	Non-Coding
109	NC_016948	GGCTGC	2	12	5248483	5248494	0 %	16.67 %	50 %	33.33 %	Non-Coding
110	NC_016948	CCCGGG	2	12	5333978	5333989	0 %	0 %	50 %	50 %	Non-Coding
111	NC_016948	CGGGCT	2	12	5354365	5354376	0 %	16.67 %	50 %	33.33 %	Non-Coding
112	NC_016948	GCCGGA	2	12	5362997	5363008	16.67 %	0 %	50 %	33.33 %	Non-Coding
113	NC_016948	CGGCGA	2	12	5392362	5392373	16.67 %	0 %	50 %	33.33 %	Non-Coding
114	NC_016948	CCGGCG	2	12	5475945	5475956	0 %	0 %	50 %	50 %	Non-Coding
115	NC_016948	TGGCAT	2	12	5477165	5477176	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
116	NC_016948	GGCGGA	2	12	5477608	5477619	16.67 %	0 %	66.67 %	16.67 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.