MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Rickettsia massiliae str. AZT80 plasmid pRMB

Total Repeats: 42

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_016939	AAT	2	6	291	296	66.67 %	33.33 %	0 %	0 %	Non-Coding
2	NC_016939	ATT	2	6	317	322	33.33 %	66.67 %	0 %	0 %	Non-Coding
3	NC_016939	TTA	2	6	1360	1365	33.33 %	66.67 %	0 %	0 %	Non-Coding
4	NC_016939	TAC	2	6	1403	1408	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
5	NC_016939	GTA	2	6	1449	1454	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
6	NC_016939	AAT	2	6	2157	2162	66.67 %	33.33 %	0 %	0 %	Non-Coding
7	NC_016939	CAT	2	6	2266	2271	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
8	NC_016939	ATA	2	6	2435	2440	66.67 %	33.33 %	0 %	0 %	Non-Coding
9	NC_016939	ACT	2	6	2442	2447	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
10	NC_016939	AGA	2	6	2582	2587	66.67 %	0 %	33.33 %	0 %	Non-Coding
11	NC_016939	CCA	2	6	2592	2597	33.33 %	0 %	0 %	66.67 %	Non-Coding
12	NC_016939	TTA	2	6	2675	2680	33.33 %	66.67 %	0 %	0 %	Non-Coding
13	NC_016939	TAC	2	6	2707	2712	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
14	NC_016939	ATG	2	6	2806	2811	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
15	NC_016939	ATA	2	6	4640	4645	66.67 %	33.33 %	0 %	0 %	Non-Coding
16	NC_016939	TAA	2	6	4805	4810	66.67 %	33.33 %	0 %	0 %	Non-Coding
17	NC_016939	GCC	2	6	4826	4831	0 %	0 %	33.33 %	66.67 %	Non-Coding
18	NC_016939	TTA	2	6	4854	4859	33.33 %	66.67 %	0 %	0 %	Non-Coding
19	NC_016939	TAT	2	6	4911	4916	33.33 %	66.67 %	0 %	0 %	Non-Coding
20	NC_016939	ATC	2	6	5406	5411	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
21	NC_016939	GTT	2	6	5481	5486	0 %	66.67 %	33.33 %	0 %	Non-Coding
22	NC_016939	ATA	2	6	5675	5680	66.67 %	33.33 %	0 %	0 %	Non-Coding
23	NC_016939	ACA	2	6	5773	5778	66.67 %	0 %	0 %	33.33 %	Non-Coding
24	NC_016939	GTG	2	6	5804	5809	0 %	33.33 %	66.67 %	0 %	Non-Coding
25	NC_016939	AGC	2	6	5818	5823	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
26	NC_016939	ATA	2	6	5902	5907	66.67 %	33.33 %	0 %	0 %	Non-Coding
27	NC_016939	TTC	2	6	7116	7121	0 %	66.67 %	0 %	33.33 %	Non-Coding
28	NC_016939	TAA	2	6	7916	7921	66.67 %	33.33 %	0 %	0 %	Non-Coding
29	NC_016939	ACA	2	6	7943	7948	66.67 %	0 %	0 %	33.33 %	Non-Coding
30	NC_016939	GAA	2	6	8195	8200	66.67 %	0 %	33.33 %	0 %	Non-Coding
31	NC_016939	AGT	2	6	8675	8680	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
32	NC_016939	ATC	2	6	8682	8687	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
33	NC_016939	ATA	2	6	8809	8814	66.67 %	33.33 %	0 %	0 %	Non-Coding
34	NC_016939	TTA	2	6	8827	8832	33.33 %	66.67 %	0 %	0 %	Non-Coding
35	NC_016939	ACT	2	6	8854	8859	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
36	NC_016939	CCT	2	6	8885	8890	0 %	33.33 %	0 %	66.67 %	Non-Coding
37	NC_016939	TTG	2	6	8900	8905	0 %	66.67 %	33.33 %	0 %	Non-Coding
38	NC_016939	ATG	2	6	12332	12337	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
39	NC_016939	ACT	2	6	12378	12383	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
40	NC_016939	TTA	2	6	12459	12464	33.33 %	66.67 %	0 %	0 %	Non-Coding
41	NC_016939	CTT	2	6	12477	12482	0 %	66.67 %	0 %	33.33 %	Non-Coding
42	NC_016939	GGA	2	6	12497	12502	33.33 %	0 %	66.67 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.