Hexa-nucleotide Non-Coding Repeats of Rickettsia rickettsii str. Hino chromosome
Total Repeats: 131
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_016914 | AAAGAC | 2 | 12 | 10780 | 10791 | 66.67 % | 0 % | 16.67 % | 16.67 % | Non-Coding |
2 | NC_016914 | AGAACA | 2 | 12 | 18062 | 18073 | 66.67 % | 0 % | 16.67 % | 16.67 % | Non-Coding |
3 | NC_016914 | CAAATA | 2 | 12 | 26972 | 26983 | 66.67 % | 16.67 % | 0 % | 16.67 % | Non-Coding |
4 | NC_016914 | TAAAGT | 2 | 12 | 27135 | 27146 | 50 % | 33.33 % | 16.67 % | 0 % | Non-Coding |
5 | NC_016914 | TTTAGG | 2 | 12 | 28513 | 28524 | 16.67 % | 50 % | 33.33 % | 0 % | Non-Coding |
6 | NC_016914 | AAGAAA | 2 | 12 | 38644 | 38655 | 83.33 % | 0 % | 16.67 % | 0 % | Non-Coding |
7 | NC_016914 | ATCTTT | 2 | 12 | 41060 | 41071 | 16.67 % | 66.67 % | 0 % | 16.67 % | Non-Coding |
8 | NC_016914 | AGTATT | 2 | 12 | 51527 | 51538 | 33.33 % | 50 % | 16.67 % | 0 % | Non-Coding |
9 | NC_016914 | AACACC | 2 | 12 | 57238 | 57249 | 50 % | 0 % | 0 % | 50 % | Non-Coding |
10 | NC_016914 | ATATAA | 2 | 12 | 86768 | 86779 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
11 | NC_016914 | AAGGAC | 2 | 12 | 87785 | 87796 | 50 % | 0 % | 33.33 % | 16.67 % | Non-Coding |
12 | NC_016914 | TTTTAA | 2 | 12 | 92551 | 92562 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
13 | NC_016914 | TAAAAA | 2 | 12 | 95283 | 95294 | 83.33 % | 16.67 % | 0 % | 0 % | Non-Coding |
14 | NC_016914 | CTCAAT | 2 | 12 | 122193 | 122204 | 33.33 % | 33.33 % | 0 % | 33.33 % | Non-Coding |
15 | NC_016914 | TTTTAA | 2 | 12 | 170023 | 170034 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
16 | NC_016914 | AATTTA | 2 | 12 | 173776 | 173787 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
17 | NC_016914 | TATTTA | 2 | 12 | 210532 | 210543 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
18 | NC_016914 | CACTAC | 2 | 12 | 229029 | 229040 | 33.33 % | 16.67 % | 0 % | 50 % | Non-Coding |
19 | NC_016914 | TCTGTC | 2 | 12 | 233382 | 233393 | 0 % | 50 % | 16.67 % | 33.33 % | Non-Coding |
20 | NC_016914 | TATTTT | 2 | 12 | 255813 | 255824 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
21 | NC_016914 | TAATTA | 2 | 12 | 256738 | 256749 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
22 | NC_016914 | CTTTAA | 2 | 12 | 264227 | 264238 | 33.33 % | 50 % | 0 % | 16.67 % | Non-Coding |
23 | NC_016914 | AAATAA | 2 | 12 | 264373 | 264384 | 83.33 % | 16.67 % | 0 % | 0 % | Non-Coding |
24 | NC_016914 | AAAATG | 2 | 12 | 264439 | 264450 | 66.67 % | 16.67 % | 16.67 % | 0 % | Non-Coding |
25 | NC_016914 | GCACCG | 2 | 12 | 265701 | 265712 | 16.67 % | 0 % | 33.33 % | 50 % | Non-Coding |
26 | NC_016914 | ATGACG | 2 | 12 | 273160 | 273171 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | Non-Coding |
27 | NC_016914 | ATTGCA | 2 | 12 | 277201 | 277212 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | Non-Coding |
28 | NC_016914 | ATTAAA | 2 | 12 | 283892 | 283903 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
29 | NC_016914 | TAAAAT | 2 | 12 | 286012 | 286023 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
30 | NC_016914 | CCTGAA | 2 | 12 | 287639 | 287650 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | Non-Coding |
31 | NC_016914 | TATTGT | 2 | 12 | 296502 | 296513 | 16.67 % | 66.67 % | 16.67 % | 0 % | Non-Coding |
32 | NC_016914 | ATCTTT | 2 | 12 | 308415 | 308426 | 16.67 % | 66.67 % | 0 % | 16.67 % | Non-Coding |
33 | NC_016914 | AATATT | 2 | 12 | 344866 | 344877 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
34 | NC_016914 | GCTATA | 2 | 12 | 368319 | 368330 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | Non-Coding |
35 | NC_016914 | ATTTAT | 2 | 12 | 372931 | 372942 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
36 | NC_016914 | AAGATA | 2 | 12 | 374213 | 374224 | 66.67 % | 16.67 % | 16.67 % | 0 % | Non-Coding |
37 | NC_016914 | CAGTTT | 2 | 12 | 375686 | 375697 | 16.67 % | 50 % | 16.67 % | 16.67 % | Non-Coding |
38 | NC_016914 | TTTTAC | 2 | 12 | 376753 | 376764 | 16.67 % | 66.67 % | 0 % | 16.67 % | Non-Coding |
39 | NC_016914 | ATATAA | 2 | 12 | 379335 | 379346 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
40 | NC_016914 | TATTGT | 2 | 12 | 388868 | 388879 | 16.67 % | 66.67 % | 16.67 % | 0 % | Non-Coding |
41 | NC_016914 | TAAAAT | 2 | 12 | 390535 | 390546 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
42 | NC_016914 | AAATTA | 2 | 12 | 390558 | 390569 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
43 | NC_016914 | GAACAT | 2 | 12 | 400160 | 400171 | 50 % | 16.67 % | 16.67 % | 16.67 % | Non-Coding |
44 | NC_016914 | TCTTGT | 2 | 12 | 422112 | 422123 | 0 % | 66.67 % | 16.67 % | 16.67 % | Non-Coding |
45 | NC_016914 | TGTAGG | 2 | 12 | 467894 | 467905 | 16.67 % | 33.33 % | 50 % | 0 % | Non-Coding |
46 | NC_016914 | AATATC | 2 | 12 | 486910 | 486921 | 50 % | 33.33 % | 0 % | 16.67 % | Non-Coding |
47 | NC_016914 | TTGGCG | 2 | 12 | 495831 | 495842 | 0 % | 33.33 % | 50 % | 16.67 % | Non-Coding |
48 | NC_016914 | AAATTT | 2 | 12 | 495880 | 495891 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
49 | NC_016914 | ATACCG | 2 | 12 | 520232 | 520243 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | Non-Coding |
50 | NC_016914 | TCATTG | 2 | 12 | 531344 | 531355 | 16.67 % | 50 % | 16.67 % | 16.67 % | Non-Coding |
51 | NC_016914 | TACTAG | 2 | 12 | 534320 | 534331 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | Non-Coding |
52 | NC_016914 | AATTTA | 2 | 12 | 547825 | 547836 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
53 | NC_016914 | TAGTTT | 2 | 12 | 551193 | 551204 | 16.67 % | 66.67 % | 16.67 % | 0 % | Non-Coding |
54 | NC_016914 | TATTAA | 2 | 12 | 554621 | 554632 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
55 | NC_016914 | ATTTTA | 3 | 18 | 555419 | 555436 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
56 | NC_016914 | ATATTA | 2 | 12 | 563869 | 563880 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
57 | NC_016914 | CTATAT | 2 | 12 | 565080 | 565091 | 33.33 % | 50 % | 0 % | 16.67 % | Non-Coding |
58 | NC_016914 | CATATT | 2 | 12 | 565611 | 565622 | 33.33 % | 50 % | 0 % | 16.67 % | Non-Coding |
59 | NC_016914 | TGCTTG | 2 | 12 | 565738 | 565749 | 0 % | 50 % | 33.33 % | 16.67 % | Non-Coding |
60 | NC_016914 | TATCAA | 2 | 12 | 566041 | 566052 | 50 % | 33.33 % | 0 % | 16.67 % | Non-Coding |
61 | NC_016914 | CAAAAA | 2 | 12 | 571662 | 571673 | 83.33 % | 0 % | 0 % | 16.67 % | Non-Coding |
62 | NC_016914 | AATATA | 2 | 12 | 585756 | 585767 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
63 | NC_016914 | GCTTGT | 2 | 12 | 599774 | 599785 | 0 % | 50 % | 33.33 % | 16.67 % | Non-Coding |
64 | NC_016914 | ACAAAA | 2 | 12 | 608359 | 608370 | 83.33 % | 0 % | 0 % | 16.67 % | Non-Coding |
65 | NC_016914 | TATTAA | 2 | 12 | 620829 | 620840 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
66 | NC_016914 | TGCTAA | 2 | 12 | 622802 | 622813 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | Non-Coding |
67 | NC_016914 | AATTAT | 2 | 12 | 662061 | 662072 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
68 | NC_016914 | TGCTTC | 2 | 12 | 673504 | 673515 | 0 % | 50 % | 16.67 % | 33.33 % | Non-Coding |
69 | NC_016914 | TAAAAC | 2 | 12 | 674429 | 674440 | 66.67 % | 16.67 % | 0 % | 16.67 % | Non-Coding |
70 | NC_016914 | ATATAA | 2 | 12 | 675788 | 675799 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
71 | NC_016914 | ATACCG | 2 | 12 | 714581 | 714592 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | Non-Coding |
72 | NC_016914 | AAGATA | 2 | 12 | 732400 | 732411 | 66.67 % | 16.67 % | 16.67 % | 0 % | Non-Coding |
73 | NC_016914 | TTATCC | 2 | 12 | 742306 | 742317 | 16.67 % | 50 % | 0 % | 33.33 % | Non-Coding |
74 | NC_016914 | TATATT | 2 | 12 | 749556 | 749567 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
75 | NC_016914 | TTTTAT | 2 | 12 | 754407 | 754418 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
76 | NC_016914 | ATATTT | 2 | 12 | 756019 | 756030 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
77 | NC_016914 | CTACTC | 2 | 12 | 766414 | 766425 | 16.67 % | 33.33 % | 0 % | 50 % | Non-Coding |
78 | NC_016914 | TATTTT | 2 | 12 | 771909 | 771920 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
79 | NC_016914 | ATTTTT | 2 | 12 | 791383 | 791394 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
80 | NC_016914 | ATAATT | 2 | 12 | 793732 | 793743 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
81 | NC_016914 | AAATTT | 2 | 12 | 794326 | 794337 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
82 | NC_016914 | ATAAAC | 2 | 12 | 795129 | 795140 | 66.67 % | 16.67 % | 0 % | 16.67 % | Non-Coding |
83 | NC_016914 | TAAACA | 2 | 12 | 796181 | 796192 | 66.67 % | 16.67 % | 0 % | 16.67 % | Non-Coding |
84 | NC_016914 | ATCGTC | 2 | 12 | 804300 | 804311 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | Non-Coding |
85 | NC_016914 | TATTTT | 2 | 12 | 812538 | 812549 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
86 | NC_016914 | GCGGAA | 2 | 12 | 819353 | 819364 | 33.33 % | 0 % | 50 % | 16.67 % | Non-Coding |
87 | NC_016914 | TATTTT | 2 | 12 | 843444 | 843455 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
88 | NC_016914 | TTAATA | 2 | 12 | 850407 | 850418 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
89 | NC_016914 | CTAAAC | 2 | 12 | 853825 | 853836 | 50 % | 16.67 % | 0 % | 33.33 % | Non-Coding |
90 | NC_016914 | ATTTAA | 2 | 12 | 859540 | 859551 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
91 | NC_016914 | GATATA | 2 | 12 | 868638 | 868649 | 50 % | 33.33 % | 16.67 % | 0 % | Non-Coding |
92 | NC_016914 | TGACTA | 2 | 12 | 878460 | 878471 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | Non-Coding |
93 | NC_016914 | ATTACT | 2 | 12 | 918461 | 918472 | 33.33 % | 50 % | 0 % | 16.67 % | Non-Coding |
94 | NC_016914 | TAGCAC | 2 | 12 | 924186 | 924197 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | Non-Coding |
95 | NC_016914 | AAATAC | 2 | 12 | 926346 | 926357 | 66.67 % | 16.67 % | 0 % | 16.67 % | Non-Coding |
96 | NC_016914 | ACTTCC | 2 | 12 | 927955 | 927966 | 16.67 % | 33.33 % | 0 % | 50 % | Non-Coding |
97 | NC_016914 | CTATAA | 2 | 12 | 928738 | 928749 | 50 % | 33.33 % | 0 % | 16.67 % | Non-Coding |
98 | NC_016914 | TTTATC | 2 | 12 | 950104 | 950115 | 16.67 % | 66.67 % | 0 % | 16.67 % | Non-Coding |
99 | NC_016914 | ACAAAA | 2 | 12 | 955574 | 955585 | 83.33 % | 0 % | 0 % | 16.67 % | Non-Coding |
100 | NC_016914 | TAATTT | 2 | 12 | 967204 | 967215 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
101 | NC_016914 | TGCTCT | 2 | 12 | 968603 | 968614 | 0 % | 50 % | 16.67 % | 33.33 % | Non-Coding |
102 | NC_016914 | GCCATG | 2 | 12 | 975896 | 975907 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | Non-Coding |
103 | NC_016914 | ATATCC | 2 | 12 | 984225 | 984236 | 33.33 % | 33.33 % | 0 % | 33.33 % | Non-Coding |
104 | NC_016914 | ATTAGG | 2 | 12 | 989509 | 989520 | 33.33 % | 33.33 % | 33.33 % | 0 % | Non-Coding |
105 | NC_016914 | AATTAT | 2 | 12 | 992179 | 992190 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
106 | NC_016914 | AATATC | 2 | 12 | 993068 | 993079 | 50 % | 33.33 % | 0 % | 16.67 % | Non-Coding |
107 | NC_016914 | CATTGT | 2 | 12 | 993907 | 993918 | 16.67 % | 50 % | 16.67 % | 16.67 % | Non-Coding |
108 | NC_016914 | AATATG | 2 | 12 | 998827 | 998838 | 50 % | 33.33 % | 16.67 % | 0 % | Non-Coding |
109 | NC_016914 | AATTTA | 2 | 12 | 1013209 | 1013220 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
110 | NC_016914 | GTTTTT | 2 | 12 | 1030911 | 1030922 | 0 % | 83.33 % | 16.67 % | 0 % | Non-Coding |
111 | NC_016914 | TTAATA | 2 | 12 | 1032483 | 1032494 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
112 | NC_016914 | CAAGAA | 2 | 12 | 1032585 | 1032596 | 66.67 % | 0 % | 16.67 % | 16.67 % | Non-Coding |
113 | NC_016914 | AACAAT | 2 | 12 | 1036100 | 1036111 | 66.67 % | 16.67 % | 0 % | 16.67 % | Non-Coding |
114 | NC_016914 | TACACC | 2 | 12 | 1036269 | 1036280 | 33.33 % | 16.67 % | 0 % | 50 % | Non-Coding |
115 | NC_016914 | CTTTAT | 2 | 12 | 1036364 | 1036375 | 16.67 % | 66.67 % | 0 % | 16.67 % | Non-Coding |
116 | NC_016914 | TTAAAT | 2 | 12 | 1044991 | 1045002 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
117 | NC_016914 | TTATAT | 2 | 12 | 1045199 | 1045210 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
118 | NC_016914 | TACTAG | 2 | 12 | 1045687 | 1045698 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | Non-Coding |
119 | NC_016914 | TTAGTT | 2 | 12 | 1046868 | 1046879 | 16.67 % | 66.67 % | 16.67 % | 0 % | Non-Coding |
120 | NC_016914 | TAGTGA | 2 | 12 | 1047640 | 1047651 | 33.33 % | 33.33 % | 33.33 % | 0 % | Non-Coding |
121 | NC_016914 | CTTTTA | 2 | 12 | 1071153 | 1071164 | 16.67 % | 66.67 % | 0 % | 16.67 % | Non-Coding |
122 | NC_016914 | AGCTTA | 2 | 12 | 1083308 | 1083319 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | Non-Coding |
123 | NC_016914 | AGTTTA | 2 | 12 | 1083411 | 1083422 | 33.33 % | 50 % | 16.67 % | 0 % | Non-Coding |
124 | NC_016914 | ATGCAT | 2 | 12 | 1085077 | 1085088 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | Non-Coding |
125 | NC_016914 | ATAATG | 2 | 12 | 1151094 | 1151105 | 50 % | 33.33 % | 16.67 % | 0 % | Non-Coding |
126 | NC_016914 | TGTTCC | 2 | 12 | 1167368 | 1167379 | 0 % | 50 % | 16.67 % | 33.33 % | Non-Coding |
127 | NC_016914 | TCATTT | 2 | 12 | 1198309 | 1198320 | 16.67 % | 66.67 % | 0 % | 16.67 % | Non-Coding |
128 | NC_016914 | CCTAAT | 2 | 12 | 1211494 | 1211505 | 33.33 % | 33.33 % | 0 % | 33.33 % | Non-Coding |
129 | NC_016914 | TCATTG | 2 | 12 | 1212936 | 1212947 | 16.67 % | 50 % | 16.67 % | 16.67 % | Non-Coding |
130 | NC_016914 | TTTATC | 2 | 12 | 1246772 | 1246783 | 16.67 % | 66.67 % | 0 % | 16.67 % | Non-Coding |
131 | NC_016914 | AAAAGA | 2 | 12 | 1262340 | 1262351 | 83.33 % | 0 % | 16.67 % | 0 % | Non-Coding |