Tetra-nucleotide Coding Repeats of Sinorhizobium fredii HH103 plasmid pSfHH103b complete sequence
Total Repeats: 121
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_016836 | GCAC | 2 | 8 | 980 | 987 | 25 % | 0 % | 25 % | 50 % | 378828573 |
2 | NC_016836 | GATG | 2 | 8 | 1283 | 1290 | 25 % | 25 % | 50 % | 0 % | 378828573 |
3 | NC_016836 | GGCC | 2 | 8 | 1358 | 1365 | 0 % | 0 % | 50 % | 50 % | 378828573 |
4 | NC_016836 | AATT | 2 | 8 | 1634 | 1641 | 50 % | 50 % | 0 % | 0 % | 378828574 |
5 | NC_016836 | GCTT | 2 | 8 | 1809 | 1816 | 0 % | 50 % | 25 % | 25 % | 378828575 |
6 | NC_016836 | TTGT | 2 | 8 | 1954 | 1961 | 0 % | 75 % | 25 % | 0 % | 378828575 |
7 | NC_016836 | TTCG | 2 | 8 | 2181 | 2188 | 0 % | 50 % | 25 % | 25 % | 378828576 |
8 | NC_016836 | GCTT | 2 | 8 | 2322 | 2329 | 0 % | 50 % | 25 % | 25 % | 378828576 |
9 | NC_016836 | TGAT | 2 | 8 | 3555 | 3562 | 25 % | 50 % | 25 % | 0 % | 378828577 |
10 | NC_016836 | GCCA | 2 | 8 | 4142 | 4149 | 25 % | 0 % | 25 % | 50 % | 378828578 |
11 | NC_016836 | GCTG | 2 | 8 | 5285 | 5292 | 0 % | 25 % | 50 % | 25 % | 378828581 |
12 | NC_016836 | GGCG | 2 | 8 | 5378 | 5385 | 0 % | 0 % | 75 % | 25 % | 378828581 |
13 | NC_016836 | AGCC | 2 | 8 | 5513 | 5520 | 25 % | 0 % | 25 % | 50 % | 378828581 |
14 | NC_016836 | CAGC | 2 | 8 | 5655 | 5662 | 25 % | 0 % | 25 % | 50 % | 378828581 |
15 | NC_016836 | GTGC | 2 | 8 | 7644 | 7651 | 0 % | 25 % | 50 % | 25 % | 378828583 |
16 | NC_016836 | GATC | 2 | 8 | 7902 | 7909 | 25 % | 25 % | 25 % | 25 % | 378828584 |
17 | NC_016836 | TTCC | 2 | 8 | 8438 | 8445 | 0 % | 50 % | 0 % | 50 % | 378828584 |
18 | NC_016836 | GATC | 2 | 8 | 9853 | 9860 | 25 % | 25 % | 25 % | 25 % | 378828585 |
19 | NC_016836 | CCGA | 2 | 8 | 9896 | 9903 | 25 % | 0 % | 25 % | 50 % | 378828585 |
20 | NC_016836 | AACG | 2 | 8 | 10625 | 10632 | 50 % | 0 % | 25 % | 25 % | 378828585 |
21 | NC_016836 | TTTC | 2 | 8 | 10878 | 10885 | 0 % | 75 % | 0 % | 25 % | 378828585 |
22 | NC_016836 | CGAG | 2 | 8 | 11853 | 11860 | 25 % | 0 % | 50 % | 25 % | 378828585 |
23 | NC_016836 | CGCT | 2 | 8 | 12280 | 12287 | 0 % | 25 % | 25 % | 50 % | 378828585 |
24 | NC_016836 | TCGA | 2 | 8 | 12426 | 12433 | 25 % | 25 % | 25 % | 25 % | 378828585 |
25 | NC_016836 | GACG | 2 | 8 | 13679 | 13686 | 25 % | 0 % | 50 % | 25 % | 378828586 |
26 | NC_016836 | GCTG | 2 | 8 | 13708 | 13715 | 0 % | 25 % | 50 % | 25 % | 378828586 |
27 | NC_016836 | CGGC | 2 | 8 | 13992 | 13999 | 0 % | 0 % | 50 % | 50 % | 378828587 |
28 | NC_016836 | GCCG | 2 | 8 | 14124 | 14131 | 0 % | 0 % | 50 % | 50 % | 378828587 |
29 | NC_016836 | AGCG | 2 | 8 | 14751 | 14758 | 25 % | 0 % | 50 % | 25 % | 378828588 |
30 | NC_016836 | CGGC | 2 | 8 | 15169 | 15176 | 0 % | 0 % | 50 % | 50 % | 378828589 |
31 | NC_016836 | GGAT | 2 | 8 | 15830 | 15837 | 25 % | 25 % | 50 % | 0 % | 378828590 |
32 | NC_016836 | CCAA | 2 | 8 | 16816 | 16823 | 50 % | 0 % | 0 % | 50 % | 378828592 |
33 | NC_016836 | TGCC | 2 | 8 | 17216 | 17223 | 0 % | 25 % | 25 % | 50 % | 378828593 |
34 | NC_016836 | GGCC | 2 | 8 | 17904 | 17911 | 0 % | 0 % | 50 % | 50 % | 378828594 |
35 | NC_016836 | GGAA | 2 | 8 | 19755 | 19762 | 50 % | 0 % | 50 % | 0 % | 378828596 |
36 | NC_016836 | CTGG | 2 | 8 | 20842 | 20849 | 0 % | 25 % | 50 % | 25 % | 378828597 |
37 | NC_016836 | CTGG | 2 | 8 | 21194 | 21201 | 0 % | 25 % | 50 % | 25 % | 378828597 |
38 | NC_016836 | ATGA | 2 | 8 | 22134 | 22141 | 50 % | 25 % | 25 % | 0 % | 378828598 |
39 | NC_016836 | CGGC | 2 | 8 | 22365 | 22372 | 0 % | 0 % | 50 % | 50 % | 378828598 |
40 | NC_016836 | CAAT | 2 | 8 | 22432 | 22439 | 50 % | 25 % | 0 % | 25 % | 378828598 |
41 | NC_016836 | GGCC | 2 | 8 | 22620 | 22627 | 0 % | 0 % | 50 % | 50 % | 378828599 |
42 | NC_016836 | TCAC | 2 | 8 | 23774 | 23781 | 25 % | 25 % | 0 % | 50 % | 378828600 |
43 | NC_016836 | TGGC | 2 | 8 | 24440 | 24447 | 0 % | 25 % | 50 % | 25 % | 378828601 |
44 | NC_016836 | GCCA | 2 | 8 | 24474 | 24481 | 25 % | 0 % | 25 % | 50 % | 378828601 |
45 | NC_016836 | TCAG | 2 | 8 | 24526 | 24533 | 25 % | 25 % | 25 % | 25 % | 378828601 |
46 | NC_016836 | GTTC | 2 | 8 | 25217 | 25224 | 0 % | 50 % | 25 % | 25 % | 378828602 |
47 | NC_016836 | AGCG | 2 | 8 | 26588 | 26595 | 25 % | 0 % | 50 % | 25 % | 378828605 |
48 | NC_016836 | CGAT | 2 | 8 | 26956 | 26963 | 25 % | 25 % | 25 % | 25 % | 378828605 |
49 | NC_016836 | GCTT | 2 | 8 | 27261 | 27268 | 0 % | 50 % | 25 % | 25 % | 378828605 |
50 | NC_016836 | CTCG | 2 | 8 | 28994 | 29001 | 0 % | 25 % | 25 % | 50 % | 378828607 |
51 | NC_016836 | CCAT | 2 | 8 | 30174 | 30181 | 25 % | 25 % | 0 % | 50 % | 378828607 |
52 | NC_016836 | GCCT | 2 | 8 | 30479 | 30486 | 0 % | 25 % | 25 % | 50 % | 378828608 |
53 | NC_016836 | ACGG | 2 | 8 | 31014 | 31021 | 25 % | 0 % | 50 % | 25 % | 378828609 |
54 | NC_016836 | CCGA | 2 | 8 | 31048 | 31055 | 25 % | 0 % | 25 % | 50 % | 378828609 |
55 | NC_016836 | CCGG | 2 | 8 | 31056 | 31063 | 0 % | 0 % | 50 % | 50 % | 378828609 |
56 | NC_016836 | GCCG | 2 | 8 | 31563 | 31570 | 0 % | 0 % | 50 % | 50 % | 378828609 |
57 | NC_016836 | CCGG | 2 | 8 | 31914 | 31921 | 0 % | 0 % | 50 % | 50 % | 378828609 |
58 | NC_016836 | GGCC | 2 | 8 | 32026 | 32033 | 0 % | 0 % | 50 % | 50 % | 378828609 |
59 | NC_016836 | CTGG | 2 | 8 | 32034 | 32041 | 0 % | 25 % | 50 % | 25 % | 378828609 |
60 | NC_016836 | GGAA | 2 | 8 | 32346 | 32353 | 50 % | 0 % | 50 % | 0 % | 378828609 |
61 | NC_016836 | CGAC | 2 | 8 | 32615 | 32622 | 25 % | 0 % | 25 % | 50 % | 378828609 |
62 | NC_016836 | GCCG | 2 | 8 | 33012 | 33019 | 0 % | 0 % | 50 % | 50 % | 378828609 |
63 | NC_016836 | ACGG | 2 | 8 | 33226 | 33233 | 25 % | 0 % | 50 % | 25 % | 378828610 |
64 | NC_016836 | GCTC | 2 | 8 | 33366 | 33373 | 0 % | 25 % | 25 % | 50 % | 378828610 |
65 | NC_016836 | AGGA | 2 | 8 | 33512 | 33519 | 50 % | 0 % | 50 % | 0 % | 378828610 |
66 | NC_016836 | GCCG | 2 | 8 | 34552 | 34559 | 0 % | 0 % | 50 % | 50 % | 378828611 |
67 | NC_016836 | GCTG | 2 | 8 | 34591 | 34598 | 0 % | 25 % | 50 % | 25 % | 378828611 |
68 | NC_016836 | GTCA | 2 | 8 | 34793 | 34800 | 25 % | 25 % | 25 % | 25 % | 378828611 |
69 | NC_016836 | TCGA | 2 | 8 | 34872 | 34879 | 25 % | 25 % | 25 % | 25 % | 378828611 |
70 | NC_016836 | TTCG | 2 | 8 | 36155 | 36162 | 0 % | 50 % | 25 % | 25 % | 378828613 |
71 | NC_016836 | GAAA | 2 | 8 | 37683 | 37690 | 75 % | 0 % | 25 % | 0 % | 378828614 |
72 | NC_016836 | CTTG | 2 | 8 | 37740 | 37747 | 0 % | 50 % | 25 % | 25 % | 378828614 |
73 | NC_016836 | TTGG | 2 | 8 | 38042 | 38049 | 0 % | 50 % | 50 % | 0 % | 378828614 |
74 | NC_016836 | CGAA | 2 | 8 | 38117 | 38124 | 50 % | 0 % | 25 % | 25 % | 378828614 |
75 | NC_016836 | GAAC | 2 | 8 | 38237 | 38244 | 50 % | 0 % | 25 % | 25 % | 378828614 |
76 | NC_016836 | TTGC | 2 | 8 | 38688 | 38695 | 0 % | 50 % | 25 % | 25 % | 378828614 |
77 | NC_016836 | GTGG | 2 | 8 | 41485 | 41492 | 0 % | 25 % | 75 % | 0 % | 378828616 |
78 | NC_016836 | GAAC | 2 | 8 | 41607 | 41614 | 50 % | 0 % | 25 % | 25 % | 378828616 |
79 | NC_016836 | GTTG | 2 | 8 | 41683 | 41690 | 0 % | 50 % | 50 % | 0 % | 378828616 |
80 | NC_016836 | GCAT | 2 | 8 | 41785 | 41792 | 25 % | 25 % | 25 % | 25 % | 378828616 |
81 | NC_016836 | CTGG | 2 | 8 | 41939 | 41946 | 0 % | 25 % | 50 % | 25 % | 378828616 |
82 | NC_016836 | CGCT | 2 | 8 | 42588 | 42595 | 0 % | 25 % | 25 % | 50 % | 378828616 |
83 | NC_016836 | GCTT | 2 | 8 | 42943 | 42950 | 0 % | 50 % | 25 % | 25 % | 378828616 |
84 | NC_016836 | CTAG | 2 | 8 | 43729 | 43736 | 25 % | 25 % | 25 % | 25 % | 378828616 |
85 | NC_016836 | GCGA | 2 | 8 | 44797 | 44804 | 25 % | 0 % | 50 % | 25 % | 378828620 |
86 | NC_016836 | GACA | 2 | 8 | 45871 | 45878 | 50 % | 0 % | 25 % | 25 % | 378828621 |
87 | NC_016836 | TGCT | 2 | 8 | 46286 | 46293 | 0 % | 50 % | 25 % | 25 % | 378828621 |
88 | NC_016836 | CGGC | 2 | 8 | 46665 | 46672 | 0 % | 0 % | 50 % | 50 % | 378828621 |
89 | NC_016836 | ACCA | 2 | 8 | 46869 | 46876 | 50 % | 0 % | 0 % | 50 % | 378828621 |
90 | NC_016836 | CTTT | 2 | 8 | 46974 | 46981 | 0 % | 75 % | 0 % | 25 % | 378828621 |
91 | NC_016836 | TCCC | 2 | 8 | 47443 | 47450 | 0 % | 25 % | 0 % | 75 % | 378828621 |
92 | NC_016836 | GAAG | 2 | 8 | 47689 | 47696 | 50 % | 0 % | 50 % | 0 % | 378828621 |
93 | NC_016836 | CGGA | 2 | 8 | 48060 | 48067 | 25 % | 0 % | 50 % | 25 % | 378828621 |
94 | NC_016836 | TGGC | 2 | 8 | 50661 | 50668 | 0 % | 25 % | 50 % | 25 % | 378828621 |
95 | NC_016836 | CCAC | 2 | 8 | 51142 | 51149 | 25 % | 0 % | 0 % | 75 % | 378828621 |
96 | NC_016836 | CGGG | 2 | 8 | 51359 | 51366 | 0 % | 0 % | 75 % | 25 % | 378828621 |
97 | NC_016836 | ATGG | 2 | 8 | 52130 | 52137 | 25 % | 25 % | 50 % | 0 % | 378828622 |
98 | NC_016836 | AGAT | 2 | 8 | 52684 | 52691 | 50 % | 25 % | 25 % | 0 % | 378828622 |
99 | NC_016836 | GCCG | 2 | 8 | 52868 | 52875 | 0 % | 0 % | 50 % | 50 % | 378828623 |
100 | NC_016836 | TGCA | 2 | 8 | 52962 | 52969 | 25 % | 25 % | 25 % | 25 % | 378828623 |
101 | NC_016836 | GATC | 2 | 8 | 53122 | 53129 | 25 % | 25 % | 25 % | 25 % | 378828623 |
102 | NC_016836 | CCGG | 2 | 8 | 53136 | 53143 | 0 % | 0 % | 50 % | 50 % | 378828623 |
103 | NC_016836 | GCTC | 2 | 8 | 54821 | 54828 | 0 % | 25 % | 25 % | 50 % | 378828623 |
104 | NC_016836 | CACT | 2 | 8 | 54951 | 54958 | 25 % | 25 % | 0 % | 50 % | 378828623 |
105 | NC_016836 | GGCC | 2 | 8 | 55265 | 55272 | 0 % | 0 % | 50 % | 50 % | 378828623 |
106 | NC_016836 | GTCG | 2 | 8 | 55652 | 55659 | 0 % | 25 % | 50 % | 25 % | 378828624 |
107 | NC_016836 | GGTT | 2 | 8 | 55818 | 55825 | 0 % | 50 % | 50 % | 0 % | 378828624 |
108 | NC_016836 | GCCG | 2 | 8 | 56045 | 56052 | 0 % | 0 % | 50 % | 50 % | 378828624 |
109 | NC_016836 | GCGG | 2 | 8 | 56372 | 56379 | 0 % | 0 % | 75 % | 25 % | 378828624 |
110 | NC_016836 | ATCC | 2 | 8 | 56463 | 56470 | 25 % | 25 % | 0 % | 50 % | 378828624 |
111 | NC_016836 | ATCG | 2 | 8 | 57056 | 57063 | 25 % | 25 % | 25 % | 25 % | 378828626 |
112 | NC_016836 | CTTT | 2 | 8 | 57358 | 57365 | 0 % | 75 % | 0 % | 25 % | 378828626 |
113 | NC_016836 | ATGC | 2 | 8 | 57746 | 57753 | 25 % | 25 % | 25 % | 25 % | 378828626 |
114 | NC_016836 | GAAC | 2 | 8 | 58052 | 58059 | 50 % | 0 % | 25 % | 25 % | 378828626 |
115 | NC_016836 | AATG | 2 | 8 | 58646 | 58653 | 50 % | 25 % | 25 % | 0 % | 378828627 |
116 | NC_016836 | GGAA | 2 | 8 | 59011 | 59018 | 50 % | 0 % | 50 % | 0 % | 378828627 |
117 | NC_016836 | CTCG | 2 | 8 | 59539 | 59546 | 0 % | 25 % | 25 % | 50 % | 378828628 |
118 | NC_016836 | GGCC | 2 | 8 | 59549 | 59556 | 0 % | 0 % | 50 % | 50 % | 378828628 |
119 | NC_016836 | CGAC | 2 | 8 | 59659 | 59666 | 25 % | 0 % | 25 % | 50 % | 378828628 |
120 | NC_016836 | CAGA | 2 | 8 | 60048 | 60055 | 50 % | 0 % | 25 % | 25 % | 378828629 |
121 | NC_016836 | GGCT | 2 | 8 | 61231 | 61238 | 0 % | 25 % | 50 % | 25 % | 378828630 |