Tetra-nucleotide Repeats of Sinorhizobium fredii HH103 plasmid pSfHH103a complete sequence
Total Repeats: 60
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_016813 | GACC | 2 | 8 | 114 | 121 | 25 % | 0 % | 25 % | 50 % | Non-Coding |
2 | NC_016813 | CTGG | 2 | 8 | 166 | 173 | 0 % | 25 % | 50 % | 25 % | Non-Coding |
3 | NC_016813 | TCGA | 2 | 8 | 277 | 284 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
4 | NC_016813 | CCTA | 2 | 8 | 678 | 685 | 25 % | 25 % | 0 % | 50 % | Non-Coding |
5 | NC_016813 | GCCG | 2 | 8 | 776 | 783 | 0 % | 0 % | 50 % | 50 % | Non-Coding |
6 | NC_016813 | ATTG | 2 | 8 | 1092 | 1099 | 25 % | 50 % | 25 % | 0 % | 378828554 |
7 | NC_016813 | CCCG | 2 | 8 | 1425 | 1432 | 0 % | 0 % | 25 % | 75 % | 378828554 |
8 | NC_016813 | GGGC | 2 | 8 | 2046 | 2053 | 0 % | 0 % | 75 % | 25 % | Non-Coding |
9 | NC_016813 | CGTT | 2 | 8 | 2298 | 2305 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
10 | NC_016813 | TCGC | 2 | 8 | 2492 | 2499 | 0 % | 25 % | 25 % | 50 % | 378828556 |
11 | NC_016813 | ATGG | 2 | 8 | 3165 | 3172 | 25 % | 25 % | 50 % | 0 % | 378828556 |
12 | NC_016813 | GGTC | 2 | 8 | 3386 | 3393 | 0 % | 25 % | 50 % | 25 % | 378828556 |
13 | NC_016813 | GATG | 2 | 8 | 3974 | 3981 | 25 % | 25 % | 50 % | 0 % | 378828556 |
14 | NC_016813 | CGGC | 2 | 8 | 4566 | 4573 | 0 % | 0 % | 50 % | 50 % | 378828556 |
15 | NC_016813 | GGGC | 2 | 8 | 4723 | 4730 | 0 % | 0 % | 75 % | 25 % | 378828556 |
16 | NC_016813 | GATC | 2 | 8 | 4916 | 4923 | 25 % | 25 % | 25 % | 25 % | 378828556 |
17 | NC_016813 | GAAA | 2 | 8 | 5189 | 5196 | 75 % | 0 % | 25 % | 0 % | 378828556 |
18 | NC_016813 | CGGC | 2 | 8 | 5829 | 5836 | 0 % | 0 % | 50 % | 50 % | 378828557 |
19 | NC_016813 | GCCC | 2 | 8 | 5994 | 6001 | 0 % | 0 % | 25 % | 75 % | 378828557 |
20 | NC_016813 | ATCT | 2 | 8 | 6261 | 6268 | 25 % | 50 % | 0 % | 25 % | 378828558 |
21 | NC_016813 | CATG | 2 | 8 | 6648 | 6655 | 25 % | 25 % | 25 % | 25 % | 378828558 |
22 | NC_016813 | CGCC | 2 | 8 | 6849 | 6856 | 0 % | 0 % | 25 % | 75 % | 378828558 |
23 | NC_016813 | CGGC | 2 | 8 | 6869 | 6876 | 0 % | 0 % | 50 % | 50 % | 378828558 |
24 | NC_016813 | GTAC | 2 | 8 | 7038 | 7045 | 25 % | 25 % | 25 % | 25 % | 378828558 |
25 | NC_016813 | GGCG | 2 | 8 | 7875 | 7882 | 0 % | 0 % | 75 % | 25 % | 378828560 |
26 | NC_016813 | GGCT | 2 | 8 | 8095 | 8102 | 0 % | 25 % | 50 % | 25 % | 378828560 |
27 | NC_016813 | GCCG | 2 | 8 | 8314 | 8321 | 0 % | 0 % | 50 % | 50 % | 378828560 |
28 | NC_016813 | GGCC | 2 | 8 | 8370 | 8377 | 0 % | 0 % | 50 % | 50 % | 378828560 |
29 | NC_016813 | GCCG | 2 | 8 | 8466 | 8473 | 0 % | 0 % | 50 % | 50 % | 378828560 |
30 | NC_016813 | CGGC | 2 | 8 | 8720 | 8727 | 0 % | 0 % | 50 % | 50 % | 378828560 |
31 | NC_016813 | GTCG | 2 | 8 | 8941 | 8948 | 0 % | 25 % | 50 % | 25 % | 378828560 |
32 | NC_016813 | AGCG | 2 | 8 | 8952 | 8959 | 25 % | 0 % | 50 % | 25 % | 378828560 |
33 | NC_016813 | CGAA | 2 | 8 | 9771 | 9778 | 50 % | 0 % | 25 % | 25 % | Non-Coding |
34 | NC_016813 | GATC | 2 | 8 | 10456 | 10463 | 25 % | 25 % | 25 % | 25 % | 378828562 |
35 | NC_016813 | CCGA | 2 | 8 | 10499 | 10506 | 25 % | 0 % | 25 % | 50 % | 378828562 |
36 | NC_016813 | AACG | 2 | 8 | 11228 | 11235 | 50 % | 0 % | 25 % | 25 % | 378828562 |
37 | NC_016813 | TTTC | 2 | 8 | 11481 | 11488 | 0 % | 75 % | 0 % | 25 % | 378828562 |
38 | NC_016813 | CGAG | 2 | 8 | 12456 | 12463 | 25 % | 0 % | 50 % | 25 % | 378828562 |
39 | NC_016813 | CGCT | 2 | 8 | 12883 | 12890 | 0 % | 25 % | 25 % | 50 % | 378828562 |
40 | NC_016813 | TCGA | 2 | 8 | 13029 | 13036 | 25 % | 25 % | 25 % | 25 % | 378828562 |
41 | NC_016813 | GATC | 2 | 8 | 13830 | 13837 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
42 | NC_016813 | GGAT | 2 | 8 | 14633 | 14640 | 25 % | 25 % | 50 % | 0 % | 378828563 |
43 | NC_016813 | GAAA | 2 | 8 | 14770 | 14777 | 75 % | 0 % | 25 % | 0 % | 378828563 |
44 | NC_016813 | CGGT | 2 | 8 | 14891 | 14898 | 0 % | 25 % | 50 % | 25 % | Non-Coding |
45 | NC_016813 | CTAT | 2 | 8 | 17133 | 17140 | 25 % | 50 % | 0 % | 25 % | 378828565 |
46 | NC_016813 | CGCT | 2 | 8 | 17142 | 17149 | 0 % | 25 % | 25 % | 50 % | 378828565 |
47 | NC_016813 | TTCC | 2 | 8 | 17720 | 17727 | 0 % | 50 % | 0 % | 50 % | Non-Coding |
48 | NC_016813 | CATT | 2 | 8 | 18085 | 18092 | 25 % | 50 % | 0 % | 25 % | 378828566 |
49 | NC_016813 | GTTG | 2 | 8 | 19070 | 19077 | 0 % | 50 % | 50 % | 0 % | 378828567 |
50 | NC_016813 | GCCG | 2 | 8 | 20181 | 20188 | 0 % | 0 % | 50 % | 50 % | 378828568 |
51 | NC_016813 | CGAG | 2 | 8 | 20441 | 20448 | 25 % | 0 % | 50 % | 25 % | 378828568 |
52 | NC_016813 | AGAA | 2 | 8 | 20686 | 20693 | 75 % | 0 % | 25 % | 0 % | 378828568 |
53 | NC_016813 | GCGG | 2 | 8 | 20739 | 20746 | 0 % | 0 % | 75 % | 25 % | 378828568 |
54 | NC_016813 | TCGC | 2 | 8 | 20909 | 20916 | 0 % | 25 % | 25 % | 50 % | 378828568 |
55 | NC_016813 | CCGG | 2 | 8 | 21867 | 21874 | 0 % | 0 % | 50 % | 50 % | 378828569 |
56 | NC_016813 | CCGG | 2 | 8 | 22042 | 22049 | 0 % | 0 % | 50 % | 50 % | 378828569 |
57 | NC_016813 | TCCC | 2 | 8 | 22161 | 22168 | 0 % | 25 % | 0 % | 75 % | 378828569 |
58 | NC_016813 | GAAA | 2 | 8 | 23403 | 23410 | 75 % | 0 % | 25 % | 0 % | 378828570 |
59 | NC_016813 | ATCG | 2 | 8 | 23746 | 23753 | 25 % | 25 % | 25 % | 25 % | 378828571 |
60 | NC_016813 | GCCA | 2 | 8 | 23906 | 23913 | 25 % | 0 % | 25 % | 50 % | Non-Coding |