MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Methanosaeta harundinacea 6Ac plasmid pH6Ac

Total Repeats: 61

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_016637	TCC	2	6	144	149	0 %	33.33 %	0 %	66.67 %	Non-Coding
2	NC_016637	TGG	2	6	163	168	0 %	33.33 %	66.67 %	0 %	Non-Coding
3	NC_016637	GGT	2	6	187	192	0 %	33.33 %	66.67 %	0 %	Non-Coding
4	NC_016637	TCT	2	6	201	206	0 %	66.67 %	0 %	33.33 %	Non-Coding
5	NC_016637	GAT	2	6	420	425	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
6	NC_016637	TAT	2	6	426	431	33.33 %	66.67 %	0 %	0 %	Non-Coding
7	NC_016637	ATT	2	6	452	457	33.33 %	66.67 %	0 %	0 %	Non-Coding
8	NC_016637	CGA	2	6	481	486	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
9	NC_016637	GAG	2	6	554	559	33.33 %	0 %	66.67 %	0 %	Non-Coding
10	NC_016637	TGA	2	6	606	611	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
11	NC_016637	TAA	2	6	676	681	66.67 %	33.33 %	0 %	0 %	Non-Coding
12	NC_016637	GTG	2	6	862	867	0 %	33.33 %	66.67 %	0 %	Non-Coding
13	NC_016637	GGA	2	6	906	911	33.33 %	0 %	66.67 %	0 %	Non-Coding
14	NC_016637	CTC	2	6	921	926	0 %	33.33 %	0 %	66.67 %	Non-Coding
15	NC_016637	GAG	2	6	935	940	33.33 %	0 %	66.67 %	0 %	Non-Coding
16	NC_016637	TGC	2	6	1078	1083	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
17	NC_016637	ATG	2	6	1373	1378	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
18	NC_016637	CGA	2	6	1409	1414	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
19	NC_016637	ACG	2	6	1416	1421	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
20	NC_016637	TCC	2	6	5132	5137	0 %	33.33 %	0 %	66.67 %	Non-Coding
21	NC_016637	GGA	2	6	5193	5198	33.33 %	0 %	66.67 %	0 %	Non-Coding
22	NC_016637	CGA	2	6	5202	5207	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
23	NC_016637	CGG	3	9	5280	5288	0 %	0 %	66.67 %	33.33 %	Non-Coding
24	NC_016637	CTG	2	6	5316	5321	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
25	NC_016637	GTT	2	6	5324	5329	0 %	66.67 %	33.33 %	0 %	Non-Coding
26	NC_016637	CAA	2	6	5331	5336	66.67 %	0 %	0 %	33.33 %	Non-Coding
27	NC_016637	CGA	2	6	5563	5568	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
28	NC_016637	GAG	2	6	5601	5606	33.33 %	0 %	66.67 %	0 %	Non-Coding
29	NC_016637	AAT	2	6	5624	5629	66.67 %	33.33 %	0 %	0 %	Non-Coding
30	NC_016637	GCG	2	6	5809	5814	0 %	0 %	66.67 %	33.33 %	Non-Coding
31	NC_016637	GGA	2	6	6052	6057	33.33 %	0 %	66.67 %	0 %	Non-Coding
32	NC_016637	CAC	2	6	6082	6087	33.33 %	0 %	0 %	66.67 %	Non-Coding
33	NC_016637	CGG	2	6	6101	6106	0 %	0 %	66.67 %	33.33 %	Non-Coding
34	NC_016637	TGA	2	6	6147	6152	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
35	NC_016637	TGA	2	6	6691	6696	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
36	NC_016637	GAT	2	6	6767	6772	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
37	NC_016637	TTA	2	6	7840	7845	33.33 %	66.67 %	0 %	0 %	Non-Coding
38	NC_016637	ACC	2	6	7870	7875	33.33 %	0 %	0 %	66.67 %	Non-Coding
39	NC_016637	TGA	2	6	7912	7917	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
40	NC_016637	GCT	2	6	8229	8234	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
41	NC_016637	TGG	2	6	8237	8242	0 %	33.33 %	66.67 %	0 %	Non-Coding
42	NC_016637	GGA	2	6	8250	8255	33.33 %	0 %	66.67 %	0 %	Non-Coding
43	NC_016637	CGG	2	6	8403	8408	0 %	0 %	66.67 %	33.33 %	Non-Coding
44	NC_016637	TCT	2	6	8409	8414	0 %	66.67 %	0 %	33.33 %	Non-Coding
45	NC_016637	CGG	3	9	8453	8461	0 %	0 %	66.67 %	33.33 %	Non-Coding
46	NC_016637	CCG	2	6	8509	8514	0 %	0 %	33.33 %	66.67 %	Non-Coding
47	NC_016637	CCT	2	6	8526	8531	0 %	33.33 %	0 %	66.67 %	Non-Coding
48	NC_016637	TCC	3	9	8549	8557	0 %	33.33 %	0 %	66.67 %	Non-Coding
49	NC_016637	GGT	2	6	8672	8677	0 %	33.33 %	66.67 %	0 %	Non-Coding
50	NC_016637	GGT	2	6	8686	8691	0 %	33.33 %	66.67 %	0 %	Non-Coding
51	NC_016637	GTT	2	6	8889	8894	0 %	66.67 %	33.33 %	0 %	Non-Coding
52	NC_016637	AGT	2	6	8961	8966	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
53	NC_016637	CAC	2	6	9029	9034	33.33 %	0 %	0 %	66.67 %	Non-Coding
54	NC_016637	GAT	2	6	9044	9049	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
55	NC_016637	CTG	2	6	9075	9080	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
56	NC_016637	ATC	2	6	9734	9739	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
57	NC_016637	GGT	2	6	9781	9786	0 %	33.33 %	66.67 %	0 %	Non-Coding
58	NC_016637	TCC	2	6	10002	10007	0 %	33.33 %	0 %	66.67 %	Non-Coding
59	NC_016637	GAG	2	6	10069	10074	33.33 %	0 %	66.67 %	0 %	Non-Coding
60	NC_016637	TGG	2	6	10094	10099	0 %	33.33 %	66.67 %	0 %	Non-Coding
61	NC_016637	GAT	2	6	10140	10145	33.33 %	33.33 %	33.33 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.