Hexa-nucleotide Repeats of Thermus sp. CCB_US3_UF1 plasmid pTCCB09
Total Repeats: 20
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_016634 | GAACCT | 2 | 12 | 1193 | 1204 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 384440652 |
2 | NC_016634 | CTACCT | 2 | 12 | 2419 | 2430 | 16.67 % | 33.33 % | 0 % | 50 % | 384440655 |
3 | NC_016634 | CGGGCG | 2 | 12 | 3125 | 3136 | 0 % | 0 % | 66.67 % | 33.33 % | 384440656 |
4 | NC_016634 | GGCCAG | 2 | 12 | 4354 | 4365 | 16.67 % | 0 % | 50 % | 33.33 % | 384440656 |
5 | NC_016634 | GGGCCA | 2 | 12 | 5302 | 5313 | 16.67 % | 0 % | 50 % | 33.33 % | 384440659 |
6 | NC_016634 | CCCGGG | 2 | 12 | 5401 | 5412 | 0 % | 0 % | 50 % | 50 % | 384440659 |
7 | NC_016634 | ACCCGC | 2 | 12 | 5511 | 5522 | 16.67 % | 0 % | 16.67 % | 66.67 % | 384440659 |
8 | NC_016634 | GGGCCA | 2 | 12 | 5818 | 5829 | 16.67 % | 0 % | 50 % | 33.33 % | 384440659 |
9 | NC_016634 | AAGCGC | 2 | 12 | 8008 | 8019 | 33.33 % | 0 % | 33.33 % | 33.33 % | 384440663 |
10 | NC_016634 | ACCCGC | 2 | 12 | 8073 | 8084 | 16.67 % | 0 % | 16.67 % | 66.67 % | 384440664 |
11 | NC_016634 | AAAGGC | 2 | 12 | 8549 | 8560 | 50 % | 0 % | 33.33 % | 16.67 % | 384440665 |
12 | NC_016634 | TGGAGG | 2 | 12 | 12074 | 12085 | 16.67 % | 16.67 % | 66.67 % | 0 % | 384440670 |
13 | NC_016634 | GTAGCG | 2 | 12 | 12431 | 12442 | 16.67 % | 16.67 % | 50 % | 16.67 % | 384440670 |
14 | NC_016634 | GGCGGA | 2 | 12 | 12986 | 12997 | 16.67 % | 0 % | 66.67 % | 16.67 % | 384440670 |
15 | NC_016634 | CCCTCC | 2 | 12 | 15937 | 15948 | 0 % | 16.67 % | 0 % | 83.33 % | 384440677 |
16 | NC_016634 | GGCCAG | 2 | 12 | 17446 | 17457 | 16.67 % | 0 % | 50 % | 33.33 % | 384440678 |
17 | NC_016634 | GGCTCA | 2 | 12 | 18309 | 18320 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 384440680 |
18 | NC_016634 | CCCGCA | 2 | 12 | 19146 | 19157 | 16.67 % | 0 % | 16.67 % | 66.67 % | 384440680 |
19 | NC_016634 | CCAGGG | 2 | 12 | 19371 | 19382 | 16.67 % | 0 % | 50 % | 33.33 % | 384440680 |
20 | NC_016634 | ACCCTC | 2 | 12 | 19690 | 19701 | 16.67 % | 16.67 % | 0 % | 66.67 % | Non-Coding |