Tetra-nucleotide Repeats of Thermus sp. CCB_US3_UF1 plasmid pTCCB09
Total Repeats: 73
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_016634 | GGCG | 2 | 8 | 60 | 67 | 0 % | 0 % | 75 % | 25 % | 384440649 |
2 | NC_016634 | GCGG | 2 | 8 | 695 | 702 | 0 % | 0 % | 75 % | 25 % | 384440650 |
3 | NC_016634 | AGGG | 2 | 8 | 735 | 742 | 25 % | 0 % | 75 % | 0 % | Non-Coding |
4 | NC_016634 | GCGG | 2 | 8 | 945 | 952 | 0 % | 0 % | 75 % | 25 % | 384440652 |
5 | NC_016634 | ACCC | 2 | 8 | 1365 | 1372 | 25 % | 0 % | 0 % | 75 % | 384440653 |
6 | NC_016634 | AGCC | 2 | 8 | 1398 | 1405 | 25 % | 0 % | 25 % | 50 % | 384440653 |
7 | NC_016634 | GCCC | 2 | 8 | 1445 | 1452 | 0 % | 0 % | 25 % | 75 % | 384440653 |
8 | NC_016634 | GGGA | 2 | 8 | 1538 | 1545 | 25 % | 0 % | 75 % | 0 % | 384440653 |
9 | NC_016634 | GGCC | 2 | 8 | 2955 | 2962 | 0 % | 0 % | 50 % | 50 % | 384440656 |
10 | NC_016634 | GGCG | 2 | 8 | 3183 | 3190 | 0 % | 0 % | 75 % | 25 % | 384440656 |
11 | NC_016634 | TCCT | 2 | 8 | 3289 | 3296 | 0 % | 50 % | 0 % | 50 % | 384440656 |
12 | NC_016634 | AGGG | 2 | 8 | 3332 | 3339 | 25 % | 0 % | 75 % | 0 % | 384440656 |
13 | NC_016634 | GGGA | 2 | 8 | 3371 | 3378 | 25 % | 0 % | 75 % | 0 % | 384440656 |
14 | NC_016634 | CCCG | 2 | 8 | 3452 | 3459 | 0 % | 0 % | 25 % | 75 % | 384440656 |
15 | NC_016634 | CCAG | 2 | 8 | 4275 | 4282 | 25 % | 0 % | 25 % | 50 % | 384440656 |
16 | NC_016634 | TCCA | 2 | 8 | 4528 | 4535 | 25 % | 25 % | 0 % | 50 % | 384440657 |
17 | NC_016634 | CCGT | 2 | 8 | 4737 | 4744 | 0 % | 25 % | 25 % | 50 % | 384440658 |
18 | NC_016634 | CAGG | 2 | 8 | 4819 | 4826 | 25 % | 0 % | 50 % | 25 % | 384440658 |
19 | NC_016634 | GGCG | 2 | 8 | 5704 | 5711 | 0 % | 0 % | 75 % | 25 % | 384440659 |
20 | NC_016634 | GCCC | 2 | 8 | 5966 | 5973 | 0 % | 0 % | 25 % | 75 % | 384440660 |
21 | NC_016634 | CCGC | 2 | 8 | 6008 | 6015 | 0 % | 0 % | 25 % | 75 % | 384440660 |
22 | NC_016634 | GCGG | 2 | 8 | 6176 | 6183 | 0 % | 0 % | 75 % | 25 % | 384440661 |
23 | NC_016634 | TGGA | 2 | 8 | 6688 | 6695 | 25 % | 25 % | 50 % | 0 % | 384440661 |
24 | NC_016634 | GGCC | 2 | 8 | 6857 | 6864 | 0 % | 0 % | 50 % | 50 % | 384440661 |
25 | NC_016634 | CGGG | 2 | 8 | 6898 | 6905 | 0 % | 0 % | 75 % | 25 % | 384440661 |
26 | NC_016634 | CTTC | 2 | 8 | 6961 | 6968 | 0 % | 50 % | 0 % | 50 % | 384440661 |
27 | NC_016634 | GAGG | 2 | 8 | 7331 | 7338 | 25 % | 0 % | 75 % | 0 % | 384440662 |
28 | NC_016634 | GGGC | 2 | 8 | 7482 | 7489 | 0 % | 0 % | 75 % | 25 % | 384440663 |
29 | NC_016634 | GACC | 2 | 8 | 7522 | 7529 | 25 % | 0 % | 25 % | 50 % | 384440663 |
30 | NC_016634 | TGAA | 2 | 8 | 8321 | 8328 | 50 % | 25 % | 25 % | 0 % | 384440664 |
31 | NC_016634 | TCAT | 3 | 12 | 8394 | 8405 | 25 % | 50 % | 0 % | 25 % | 384440665 |
32 | NC_016634 | TTTA | 2 | 8 | 8580 | 8587 | 25 % | 75 % | 0 % | 0 % | 384440665 |
33 | NC_016634 | ATCT | 2 | 8 | 8930 | 8937 | 25 % | 50 % | 0 % | 25 % | 384440665 |
34 | NC_016634 | GAAA | 2 | 8 | 9156 | 9163 | 75 % | 0 % | 25 % | 0 % | 384440665 |
35 | NC_016634 | GCTG | 3 | 12 | 9621 | 9632 | 0 % | 25 % | 50 % | 25 % | 384440666 |
36 | NC_016634 | GAGG | 2 | 8 | 9757 | 9764 | 25 % | 0 % | 75 % | 0 % | 384440666 |
37 | NC_016634 | AAGG | 2 | 8 | 10073 | 10080 | 50 % | 0 % | 50 % | 0 % | 384440666 |
38 | NC_016634 | CAAA | 2 | 8 | 10163 | 10170 | 75 % | 0 % | 0 % | 25 % | 384440667 |
39 | NC_016634 | CCCA | 2 | 8 | 10214 | 10221 | 25 % | 0 % | 0 % | 75 % | 384440667 |
40 | NC_016634 | CTGT | 2 | 8 | 10533 | 10540 | 0 % | 50 % | 25 % | 25 % | 384440667 |
41 | NC_016634 | CAAG | 2 | 8 | 10955 | 10962 | 50 % | 0 % | 25 % | 25 % | Non-Coding |
42 | NC_016634 | CGCT | 2 | 8 | 11293 | 11300 | 0 % | 25 % | 25 % | 50 % | Non-Coding |
43 | NC_016634 | CGGG | 2 | 8 | 11503 | 11510 | 0 % | 0 % | 75 % | 25 % | 384440668 |
44 | NC_016634 | CCTT | 2 | 8 | 11534 | 11541 | 0 % | 50 % | 0 % | 50 % | 384440668 |
45 | NC_016634 | GAGC | 2 | 8 | 11792 | 11799 | 25 % | 0 % | 50 % | 25 % | 384440669 |
46 | NC_016634 | CAAC | 2 | 8 | 11953 | 11960 | 50 % | 0 % | 0 % | 50 % | Non-Coding |
47 | NC_016634 | GAAA | 2 | 8 | 12458 | 12465 | 75 % | 0 % | 25 % | 0 % | 384440670 |
48 | NC_016634 | GCCC | 2 | 8 | 13484 | 13491 | 0 % | 0 % | 25 % | 75 % | 384440672 |
49 | NC_016634 | GCTG | 2 | 8 | 13726 | 13733 | 0 % | 25 % | 50 % | 25 % | 384440672 |
50 | NC_016634 | CGGG | 2 | 8 | 13861 | 13868 | 0 % | 0 % | 75 % | 25 % | 384440672 |
51 | NC_016634 | CAAG | 2 | 8 | 14316 | 14323 | 50 % | 0 % | 25 % | 25 % | 384440673 |
52 | NC_016634 | CCGA | 2 | 8 | 14330 | 14337 | 25 % | 0 % | 25 % | 50 % | 384440673 |
53 | NC_016634 | GTCC | 2 | 8 | 14692 | 14699 | 0 % | 25 % | 25 % | 50 % | 384440675 |
54 | NC_016634 | GCCC | 2 | 8 | 14763 | 14770 | 0 % | 0 % | 25 % | 75 % | 384440675 |
55 | NC_016634 | ACGG | 2 | 8 | 15056 | 15063 | 25 % | 0 % | 50 % | 25 % | 384440676 |
56 | NC_016634 | GTCC | 2 | 8 | 16053 | 16060 | 0 % | 25 % | 25 % | 50 % | 384440677 |
57 | NC_016634 | ACCC | 2 | 8 | 16660 | 16667 | 25 % | 0 % | 0 % | 75 % | 384440678 |
58 | NC_016634 | CTTT | 2 | 8 | 16994 | 17001 | 0 % | 75 % | 0 % | 25 % | 384440678 |
59 | NC_016634 | CCGC | 2 | 8 | 17013 | 17020 | 0 % | 0 % | 25 % | 75 % | 384440678 |
60 | NC_016634 | CCCT | 2 | 8 | 17701 | 17708 | 0 % | 25 % | 0 % | 75 % | 384440679 |
61 | NC_016634 | TAGT | 2 | 8 | 17802 | 17809 | 25 % | 50 % | 25 % | 0 % | 384440679 |
62 | NC_016634 | TCCC | 2 | 8 | 17820 | 17827 | 0 % | 25 % | 0 % | 75 % | 384440679 |
63 | NC_016634 | CGGG | 2 | 8 | 18205 | 18212 | 0 % | 0 % | 75 % | 25 % | 384440680 |
64 | NC_016634 | AGGC | 2 | 8 | 18371 | 18378 | 25 % | 0 % | 50 % | 25 % | 384440680 |
65 | NC_016634 | GGGC | 2 | 8 | 18518 | 18525 | 0 % | 0 % | 75 % | 25 % | 384440680 |
66 | NC_016634 | GGCT | 2 | 8 | 18576 | 18583 | 0 % | 25 % | 50 % | 25 % | 384440680 |
67 | NC_016634 | GCCC | 2 | 8 | 18802 | 18809 | 0 % | 0 % | 25 % | 75 % | 384440680 |
68 | NC_016634 | CGCC | 2 | 8 | 18817 | 18824 | 0 % | 0 % | 25 % | 75 % | 384440680 |
69 | NC_016634 | GGAA | 2 | 8 | 18915 | 18922 | 50 % | 0 % | 50 % | 0 % | 384440680 |
70 | NC_016634 | ACGC | 2 | 8 | 18962 | 18969 | 25 % | 0 % | 25 % | 50 % | 384440680 |
71 | NC_016634 | CCCG | 2 | 8 | 18971 | 18978 | 0 % | 0 % | 25 % | 75 % | 384440680 |
72 | NC_016634 | CAGG | 2 | 8 | 19012 | 19019 | 25 % | 0 % | 50 % | 25 % | 384440680 |
73 | NC_016634 | GGGC | 2 | 8 | 19247 | 19254 | 0 % | 0 % | 75 % | 25 % | 384440680 |