MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Azospirillum brasilense Sp245 plasmid AZOBR_p2

Total Repeats: 44

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_016618	CTGCTC	2	12	49483	49494	0 %	33.33 %	16.67 %	50 %	Non-Coding
2	NC_016618	TCACCT	2	12	53110	53121	16.67 %	33.33 %	0 %	50 %	Non-Coding
3	NC_016618	CCAGCG	2	12	71778	71789	16.67 %	0 %	33.33 %	50 %	Non-Coding
4	NC_016618	CGGGCA	2	12	77342	77353	16.67 %	0 %	50 %	33.33 %	Non-Coding
5	NC_016618	GCCGAC	2	12	102734	102745	16.67 %	0 %	33.33 %	50 %	Non-Coding
6	NC_016618	GCGGAC	2	12	103428	103439	16.67 %	0 %	50 %	33.33 %	Non-Coding
7	NC_016618	GGCCAA	2	12	124351	124362	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
8	NC_016618	AAGAAA	2	12	131973	131984	83.33 %	0 %	16.67 %	0 %	Non-Coding
9	NC_016618	AAAGAG	2	12	145413	145424	66.67 %	0 %	33.33 %	0 %	Non-Coding
10	NC_016618	TTGACG	2	12	148071	148082	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
11	NC_016618	CGCCCG	2	12	166254	166265	0 %	0 %	33.33 %	66.67 %	Non-Coding
12	NC_016618	AATGAT	2	12	171268	171279	50 %	33.33 %	16.67 %	0 %	Non-Coding
13	NC_016618	GGGCTG	2	12	192559	192570	0 %	16.67 %	66.67 %	16.67 %	Non-Coding
14	NC_016618	GATGCG	2	12	192597	192608	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
15	NC_016618	TGGCCG	2	12	193341	193352	0 %	16.67 %	50 %	33.33 %	Non-Coding
16	NC_016618	GGCGAC	2	12	193408	193419	16.67 %	0 %	50 %	33.33 %	Non-Coding
17	NC_016618	TCCGGG	2	12	223361	223372	0 %	16.67 %	50 %	33.33 %	Non-Coding
18	NC_016618	GATGAA	2	12	248710	248721	50 %	16.67 %	33.33 %	0 %	Non-Coding
19	NC_016618	CGCTGG	2	12	268562	268573	0 %	16.67 %	50 %	33.33 %	Non-Coding
20	NC_016618	GTGGCG	2	12	277742	277753	0 %	16.67 %	66.67 %	16.67 %	Non-Coding
21	NC_016618	CACCCG	2	12	285695	285706	16.67 %	0 %	16.67 %	66.67 %	Non-Coding
22	NC_016618	CTGACC	2	12	309874	309885	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
23	NC_016618	CCCTCT	2	12	382343	382354	0 %	33.33 %	0 %	66.67 %	Non-Coding
24	NC_016618	TCTCCC	2	12	382374	382385	0 %	33.33 %	0 %	66.67 %	Non-Coding
25	NC_016618	CGGGCT	2	12	415484	415495	0 %	16.67 %	50 %	33.33 %	Non-Coding
26	NC_016618	CAGGAA	2	12	434774	434785	50 %	0 %	33.33 %	16.67 %	Non-Coding
27	NC_016618	AGCGCC	2	12	454326	454337	16.67 %	0 %	33.33 %	50 %	Non-Coding
28	NC_016618	TGCGGC	2	12	509576	509587	0 %	16.67 %	50 %	33.33 %	Non-Coding
29	NC_016618	AGCCCC	2	12	583148	583159	16.67 %	0 %	16.67 %	66.67 %	Non-Coding
30	NC_016618	AGGGTG	2	12	587115	587126	16.67 %	16.67 %	66.67 %	0 %	Non-Coding
31	NC_016618	TGGCGA	2	12	588119	588130	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
32	NC_016618	TTCGCC	2	12	656690	656701	0 %	33.33 %	16.67 %	50 %	Non-Coding
33	NC_016618	TCCGCC	2	12	657248	657259	0 %	16.67 %	16.67 %	66.67 %	Non-Coding
34	NC_016618	TGACGA	2	12	703608	703619	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
35	NC_016618	CTTCGG	2	12	704103	704114	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
36	NC_016618	CCGCGC	2	12	717396	717407	0 %	0 %	33.33 %	66.67 %	Non-Coding
37	NC_016618	AGCGGC	2	12	727951	727962	16.67 %	0 %	50 %	33.33 %	Non-Coding
38	NC_016618	CGTCGG	2	12	739962	739973	0 %	16.67 %	50 %	33.33 %	Non-Coding
39	NC_016618	GCACCG	2	12	740397	740408	16.67 %	0 %	33.33 %	50 %	Non-Coding
40	NC_016618	TCACCG	2	12	763495	763506	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
41	NC_016618	CGAAAT	2	12	795176	795187	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
42	NC_016618	TCAGGA	2	12	800314	800325	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
43	NC_016618	TGCGGG	2	12	800648	800659	0 %	16.67 %	66.67 %	16.67 %	Non-Coding
44	NC_016618	CGCCCG	2	12	812749	812760	0 %	0 %	33.33 %	66.67 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.