MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Candidatus Chloracidobacterium thermophilum B chromosome chromosome 2

Total Repeats: 37

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_016025	GGGCGG	2	12	7425	7436	0 %	0 %	83.33 %	16.67 %	Non-Coding
2	NC_016025	TTGACC	2	12	15344	15355	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
3	NC_016025	TCAGAA	2	12	48738	48749	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
4	NC_016025	ATGGCA	2	12	74886	74897	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
5	NC_016025	GGGCTT	2	12	136052	136063	0 %	33.33 %	50 %	16.67 %	Non-Coding
6	NC_016025	TTGCCT	2	12	202516	202527	0 %	50 %	16.67 %	33.33 %	Non-Coding
7	NC_016025	TGGCGG	2	12	297552	297563	0 %	16.67 %	66.67 %	16.67 %	Non-Coding
8	NC_016025	CGTTAC	2	12	312704	312715	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
9	NC_016025	GGAGAG	2	12	339931	339942	33.33 %	0 %	66.67 %	0 %	Non-Coding
10	NC_016025	TTCTTG	2	12	353511	353522	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
11	NC_016025	CAGGCA	2	12	376842	376853	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
12	NC_016025	GCGTCA	2	12	426224	426235	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
13	NC_016025	AGCCTT	2	12	436014	436025	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
14	NC_016025	CCACGG	2	12	460285	460296	16.67 %	0 %	33.33 %	50 %	Non-Coding
15	NC_016025	TTCTTG	2	12	464866	464877	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
16	NC_016025	GTTTGT	2	12	472655	472666	0 %	66.67 %	33.33 %	0 %	Non-Coding
17	NC_016025	TTTTGT	2	12	493778	493789	0 %	83.33 %	16.67 %	0 %	Non-Coding
18	NC_016025	CAATAA	2	12	529932	529943	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
19	NC_016025	TGCCGG	2	12	578018	578029	0 %	16.67 %	50 %	33.33 %	Non-Coding
20	NC_016025	TTCTTG	2	12	584969	584980	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
21	NC_016025	TGTCTT	2	12	616720	616731	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
22	NC_016025	TGGCGC	2	12	640961	640972	0 %	16.67 %	50 %	33.33 %	Non-Coding
23	NC_016025	ACCGGA	2	12	767908	767919	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
24	NC_016025	ACACTC	2	12	784845	784856	33.33 %	16.67 %	0 %	50 %	Non-Coding
25	NC_016025	TTCTTG	2	12	795869	795880	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
26	NC_016025	GCAACA	2	12	798450	798461	50 %	0 %	16.67 %	33.33 %	Non-Coding
27	NC_016025	AACCAA	2	12	813906	813917	66.67 %	0 %	0 %	33.33 %	Non-Coding
28	NC_016025	AGGCAT	3	18	828331	828348	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
29	NC_016025	AAGGAA	2	12	866276	866287	66.67 %	0 %	33.33 %	0 %	Non-Coding
30	NC_016025	ATGCGC	2	12	866387	866398	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
31	NC_016025	CGCCAG	2	12	896817	896828	16.67 %	0 %	33.33 %	50 %	Non-Coding
32	NC_016025	GCCAGC	2	12	900048	900059	16.67 %	0 %	33.33 %	50 %	Non-Coding
33	NC_016025	CGATCT	2	12	923543	923554	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
34	NC_016025	CGCCTT	2	12	951066	951077	0 %	33.33 %	16.67 %	50 %	Non-Coding
35	NC_016025	CGGCTC	2	12	987981	987992	0 %	16.67 %	33.33 %	50 %	Non-Coding
36	NC_016025	AGGTCA	2	12	992690	992701	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
37	NC_016025	GCCCTT	2	12	1011000	1011011	0 %	33.33 %	16.67 %	50 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.