MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Lactobacillus sanfranciscensis TMW 1.1304 plasmid pLS2

Total Repeats: 84

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_015980	ATA	2	6	11	16	66.67 %	33.33 %	0 %	0 %	Non-Coding
2	NC_015980	TAA	2	6	72	77	66.67 %	33.33 %	0 %	0 %	Non-Coding
3	NC_015980	GGT	2	6	138	143	0 %	33.33 %	66.67 %	0 %	Non-Coding
4	NC_015980	ATT	2	6	1319	1324	33.33 %	66.67 %	0 %	0 %	Non-Coding
5	NC_015980	CTT	2	6	1429	1434	0 %	66.67 %	0 %	33.33 %	Non-Coding
6	NC_015980	ATT	2	6	1441	1446	33.33 %	66.67 %	0 %	0 %	Non-Coding
7	NC_015980	ATT	2	6	1489	1494	33.33 %	66.67 %	0 %	0 %	Non-Coding
8	NC_015980	ATT	2	6	1580	1585	33.33 %	66.67 %	0 %	0 %	Non-Coding
9	NC_015980	CTT	2	6	1690	1695	0 %	66.67 %	0 %	33.33 %	Non-Coding
10	NC_015980	ATT	2	6	1702	1707	33.33 %	66.67 %	0 %	0 %	Non-Coding
11	NC_015980	ATT	2	6	1750	1755	33.33 %	66.67 %	0 %	0 %	Non-Coding
12	NC_015980	ATT	2	6	1842	1847	33.33 %	66.67 %	0 %	0 %	Non-Coding
13	NC_015980	CTT	2	6	1952	1957	0 %	66.67 %	0 %	33.33 %	Non-Coding
14	NC_015980	ATT	2	6	1964	1969	33.33 %	66.67 %	0 %	0 %	Non-Coding
15	NC_015980	ATT	2	6	2012	2017	33.33 %	66.67 %	0 %	0 %	Non-Coding
16	NC_015980	TCT	2	6	2043	2048	0 %	66.67 %	0 %	33.33 %	Non-Coding
17	NC_015980	ACA	2	6	2150	2155	66.67 %	0 %	0 %	33.33 %	Non-Coding
18	NC_015980	TAG	2	6	2174	2179	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
19	NC_015980	GAA	2	6	2200	2205	66.67 %	0 %	33.33 %	0 %	Non-Coding
20	NC_015980	AGC	2	6	2217	2222	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
21	NC_015980	TAC	2	6	2277	2282	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
22	NC_015980	ATC	2	6	3543	3548	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
23	NC_015980	TCT	2	6	3737	3742	0 %	66.67 %	0 %	33.33 %	Non-Coding
24	NC_015980	CCA	2	6	3830	3835	33.33 %	0 %	0 %	66.67 %	Non-Coding
25	NC_015980	TAA	2	6	3838	3843	66.67 %	33.33 %	0 %	0 %	Non-Coding
26	NC_015980	GAA	2	6	3857	3862	66.67 %	0 %	33.33 %	0 %	Non-Coding
27	NC_015980	CTG	2	6	3952	3957	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
28	NC_015980	ATT	2	6	3958	3963	33.33 %	66.67 %	0 %	0 %	Non-Coding
29	NC_015980	GAA	2	6	4017	4022	66.67 %	0 %	33.33 %	0 %	Non-Coding
30	NC_015980	ATG	2	6	4108	4113	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
31	NC_015980	AGC	2	6	4196	4201	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
32	NC_015980	AGA	2	6	4349	4354	66.67 %	0 %	33.33 %	0 %	Non-Coding
33	NC_015980	CAG	2	6	4634	4639	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
34	NC_015980	CAA	2	6	4731	4736	66.67 %	0 %	0 %	33.33 %	Non-Coding
35	NC_015980	AAT	2	6	4784	4789	66.67 %	33.33 %	0 %	0 %	Non-Coding
36	NC_015980	TGT	2	6	4805	4810	0 %	66.67 %	33.33 %	0 %	Non-Coding
37	NC_015980	ATT	2	6	4908	4913	33.33 %	66.67 %	0 %	0 %	Non-Coding
38	NC_015980	TCC	2	6	6037	6042	0 %	33.33 %	0 %	66.67 %	Non-Coding
39	NC_015980	GGA	2	6	7571	7576	33.33 %	0 %	66.67 %	0 %	Non-Coding
40	NC_015980	AAT	2	6	9412	9417	66.67 %	33.33 %	0 %	0 %	Non-Coding
41	NC_015980	TGA	2	6	9554	9559	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
42	NC_015980	TGA	2	6	10323	10328	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
43	NC_015980	TAT	2	6	10361	10366	33.33 %	66.67 %	0 %	0 %	Non-Coding
44	NC_015980	GTT	2	6	10417	10422	0 %	66.67 %	33.33 %	0 %	Non-Coding
45	NC_015980	TAA	2	6	10732	10737	66.67 %	33.33 %	0 %	0 %	Non-Coding
46	NC_015980	CAC	2	6	10750	10755	33.33 %	0 %	0 %	66.67 %	Non-Coding
47	NC_015980	CCA	2	6	10756	10761	33.33 %	0 %	0 %	66.67 %	Non-Coding
48	NC_015980	CAT	2	6	10887	10892	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
49	NC_015980	TCG	2	6	11085	11090	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
50	NC_015980	AAG	2	6	11191	11196	66.67 %	0 %	33.33 %	0 %	Non-Coding
51	NC_015980	CAA	2	6	11210	11215	66.67 %	0 %	0 %	33.33 %	Non-Coding
52	NC_015980	TGA	2	6	11269	11274	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
53	NC_015980	ATA	2	6	15292	15297	66.67 %	33.33 %	0 %	0 %	Non-Coding
54	NC_015980	TTC	2	6	15375	15380	0 %	66.67 %	0 %	33.33 %	Non-Coding
55	NC_015980	CAA	2	6	15441	15446	66.67 %	0 %	0 %	33.33 %	Non-Coding
56	NC_015980	TGA	2	6	15450	15455	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
57	NC_015980	AAC	2	6	15540	15545	66.67 %	0 %	0 %	33.33 %	Non-Coding
58	NC_015980	CGA	2	6	15583	15588	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
59	NC_015980	GCT	2	6	15621	15626	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
60	NC_015980	AGA	2	6	15836	15841	66.67 %	0 %	33.33 %	0 %	Non-Coding
61	NC_015980	CAC	2	6	15881	15886	33.33 %	0 %	0 %	66.67 %	Non-Coding
62	NC_015980	TCA	2	6	15958	15963	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
63	NC_015980	CTT	2	6	16011	16016	0 %	66.67 %	0 %	33.33 %	Non-Coding
64	NC_015980	GCT	2	6	16085	16090	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
65	NC_015980	GAA	2	6	16298	16303	66.67 %	0 %	33.33 %	0 %	Non-Coding
66	NC_015980	CCT	2	6	16337	16342	0 %	33.33 %	0 %	66.67 %	Non-Coding
67	NC_015980	TTG	2	6	16545	16550	0 %	66.67 %	33.33 %	0 %	Non-Coding
68	NC_015980	CCT	2	6	16596	16601	0 %	33.33 %	0 %	66.67 %	Non-Coding
69	NC_015980	TCT	2	6	16841	16846	0 %	66.67 %	0 %	33.33 %	Non-Coding
70	NC_015980	CCT	2	6	16877	16882	0 %	33.33 %	0 %	66.67 %	Non-Coding
71	NC_015980	AAC	2	6	16893	16898	66.67 %	0 %	0 %	33.33 %	Non-Coding
72	NC_015980	ACT	2	6	16908	16913	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
73	NC_015980	CTA	2	6	16920	16925	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
74	NC_015980	GCC	2	6	16972	16977	0 %	0 %	33.33 %	66.67 %	Non-Coding
75	NC_015980	AAC	2	6	17690	17695	66.67 %	0 %	0 %	33.33 %	Non-Coding
76	NC_015980	TAT	2	6	17698	17703	33.33 %	66.67 %	0 %	0 %	Non-Coding
77	NC_015980	AGA	3	9	17979	17987	66.67 %	0 %	33.33 %	0 %	Non-Coding
78	NC_015980	TCG	2	6	18000	18005	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
79	NC_015980	CGT	2	6	18016	18021	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
80	NC_015980	AGA	2	6	18241	18246	66.67 %	0 %	33.33 %	0 %	Non-Coding
81	NC_015980	TAA	2	6	18337	18342	66.67 %	33.33 %	0 %	0 %	Non-Coding
82	NC_015980	TGG	2	6	18495	18500	0 %	33.33 %	66.67 %	0 %	Non-Coding
83	NC_015980	ATT	2	6	18616	18621	33.33 %	66.67 %	0 %	0 %	Non-Coding
84	NC_015980	ATT	2	6	18704	18709	33.33 %	66.67 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.