MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Repeats of Acidithiobacillus caldus SM-1 plasmid pLAtc3

Total Repeats: 21

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_015854	AAGGCG	2	12	106	117	33.33 %	0 %	50 %	16.67 %	Non-Coding
2	NC_015854	CTTGCC	2	12	1294	1305	0 %	33.33 %	16.67 %	50 %	340783893
3	NC_015854	CAGAGG	2	12	3885	3896	33.33 %	0 %	50 %	16.67 %	Non-Coding
4	NC_015854	GCAGGG	2	12	4659	4670	16.67 %	0 %	66.67 %	16.67 %	340783894
5	NC_015854	CGCCAC	2	12	4906	4917	16.67 %	0 %	16.67 %	66.67 %	340783894
6	NC_015854	CGCCTG	2	12	6407	6418	0 %	16.67 %	33.33 %	50 %	340783895
7	NC_015854	GCGCCT	2	12	6592	6603	0 %	16.67 %	33.33 %	50 %	340783895
8	NC_015854	GAGATC	2	12	7219	7230	33.33 %	16.67 %	33.33 %	16.67 %	340783896
9	NC_015854	GCCACC	2	12	9244	9255	16.67 %	0 %	16.67 %	66.67 %	340783897
10	NC_015854	GACCGA	2	12	12544	12555	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
11	NC_015854	CGCTTG	2	12	16582	16593	0 %	33.33 %	33.33 %	33.33 %	340783906
12	NC_015854	GGAGCA	2	12	16812	16823	33.33 %	0 %	50 %	16.67 %	340783906
13	NC_015854	AGCGGC	2	12	17192	17203	16.67 %	0 %	50 %	33.33 %	340783906
14	NC_015854	GCGGAG	2	12	17491	17502	16.67 %	0 %	66.67 %	16.67 %	340783906
15	NC_015854	GGAACG	2	12	17787	17798	33.33 %	0 %	50 %	16.67 %	340783906
16	NC_015854	AGCGCA	2	12	18531	18542	33.33 %	0 %	33.33 %	33.33 %	340783908
17	NC_015854	GAGCGG	2	12	18704	18715	16.67 %	0 %	66.67 %	16.67 %	340783908
18	NC_015854	GCCTTG	2	12	20435	20446	0 %	33.33 %	33.33 %	33.33 %	340783910
19	NC_015854	GCTGCA	2	12	24174	24185	16.67 %	16.67 %	33.33 %	33.33 %	340783914
20	NC_015854	GAGGAT	2	12	24794	24805	33.33 %	16.67 %	50 %	0 %	340783916
21	NC_015854	TCAAGC	2	12	26705	26716	33.33 %	16.67 %	16.67 %	33.33 %	340783919

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.