Hexa-nucleotide Coding Repeats of Acidithiobacillus caldus SM-1 plasmid pLAtc3
Total Repeats: 18
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_015854 | CTTGCC | 2 | 12 | 1294 | 1305 | 0 % | 33.33 % | 16.67 % | 50 % | 340783893 |
2 | NC_015854 | GCAGGG | 2 | 12 | 4659 | 4670 | 16.67 % | 0 % | 66.67 % | 16.67 % | 340783894 |
3 | NC_015854 | CGCCAC | 2 | 12 | 4906 | 4917 | 16.67 % | 0 % | 16.67 % | 66.67 % | 340783894 |
4 | NC_015854 | CGCCTG | 2 | 12 | 6407 | 6418 | 0 % | 16.67 % | 33.33 % | 50 % | 340783895 |
5 | NC_015854 | GCGCCT | 2 | 12 | 6592 | 6603 | 0 % | 16.67 % | 33.33 % | 50 % | 340783895 |
6 | NC_015854 | GAGATC | 2 | 12 | 7219 | 7230 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 340783896 |
7 | NC_015854 | GCCACC | 2 | 12 | 9244 | 9255 | 16.67 % | 0 % | 16.67 % | 66.67 % | 340783897 |
8 | NC_015854 | CGCTTG | 2 | 12 | 16582 | 16593 | 0 % | 33.33 % | 33.33 % | 33.33 % | 340783906 |
9 | NC_015854 | GGAGCA | 2 | 12 | 16812 | 16823 | 33.33 % | 0 % | 50 % | 16.67 % | 340783906 |
10 | NC_015854 | AGCGGC | 2 | 12 | 17192 | 17203 | 16.67 % | 0 % | 50 % | 33.33 % | 340783906 |
11 | NC_015854 | GCGGAG | 2 | 12 | 17491 | 17502 | 16.67 % | 0 % | 66.67 % | 16.67 % | 340783906 |
12 | NC_015854 | GGAACG | 2 | 12 | 17787 | 17798 | 33.33 % | 0 % | 50 % | 16.67 % | 340783906 |
13 | NC_015854 | AGCGCA | 2 | 12 | 18531 | 18542 | 33.33 % | 0 % | 33.33 % | 33.33 % | 340783908 |
14 | NC_015854 | GAGCGG | 2 | 12 | 18704 | 18715 | 16.67 % | 0 % | 66.67 % | 16.67 % | 340783908 |
15 | NC_015854 | GCCTTG | 2 | 12 | 20435 | 20446 | 0 % | 33.33 % | 33.33 % | 33.33 % | 340783910 |
16 | NC_015854 | GCTGCA | 2 | 12 | 24174 | 24185 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 340783914 |
17 | NC_015854 | GAGGAT | 2 | 12 | 24794 | 24805 | 33.33 % | 16.67 % | 50 % | 0 % | 340783916 |
18 | NC_015854 | TCAAGC | 2 | 12 | 26705 | 26716 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 340783919 |