Penta-nucleotide Repeats of Acidithiobacillus caldus SM-1 plasmid pLAtc3
Total Repeats: 18
| S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_015854 | GCGCG | 2 | 10 | 949 | 958 | 0 % | 0 % | 60 % | 40 % | 340783893 |
| 2 | NC_015854 | CGGCG | 2 | 10 | 2202 | 2211 | 0 % | 0 % | 60 % | 40 % | 340783893 |
| 3 | NC_015854 | GCCTC | 2 | 10 | 3753 | 3762 | 0 % | 20 % | 20 % | 60 % | Non-Coding |
| 4 | NC_015854 | GCAGC | 2 | 10 | 3981 | 3990 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
| 5 | NC_015854 | CAGAA | 2 | 10 | 4025 | 4034 | 60 % | 0 % | 20 % | 20 % | Non-Coding |
| 6 | NC_015854 | AATCC | 2 | 10 | 5331 | 5340 | 40 % | 20 % | 0 % | 40 % | 340783894 |
| 7 | NC_015854 | TGCCC | 2 | 10 | 10184 | 10193 | 0 % | 20 % | 20 % | 60 % | 340783897 |
| 8 | NC_015854 | CCCAG | 2 | 10 | 10402 | 10411 | 20 % | 0 % | 20 % | 60 % | 340783898 |
| 9 | NC_015854 | CCAGC | 2 | 10 | 12688 | 12697 | 20 % | 0 % | 20 % | 60 % | 340783902 |
| 10 | NC_015854 | CTGGG | 2 | 10 | 13752 | 13761 | 0 % | 20 % | 60 % | 20 % | Non-Coding |
| 11 | NC_015854 | CGCGG | 2 | 10 | 17481 | 17490 | 0 % | 0 % | 60 % | 40 % | 340783906 |
| 12 | NC_015854 | GGACG | 2 | 10 | 17856 | 17865 | 20 % | 0 % | 60 % | 20 % | 340783906 |
| 13 | NC_015854 | AGCGG | 2 | 10 | 18567 | 18576 | 20 % | 0 % | 60 % | 20 % | 340783908 |
| 14 | NC_015854 | GTGCG | 2 | 10 | 18821 | 18830 | 0 % | 20 % | 60 % | 20 % | 340783908 |
| 15 | NC_015854 | ACGTC | 2 | 10 | 22408 | 22417 | 20 % | 20 % | 20 % | 40 % | 340783912 |
| 16 | NC_015854 | AAGAT | 2 | 10 | 23329 | 23338 | 60 % | 20 % | 20 % | 0 % | Non-Coding |
| 17 | NC_015854 | CTGCC | 2 | 10 | 26902 | 26911 | 0 % | 20 % | 20 % | 60 % | 340783919 |
| 18 | NC_015854 | ATGCC | 2 | 10 | 28688 | 28697 | 20 % | 20 % | 20 % | 40 % | Non-Coding |