MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Acidithiobacillus caldus SM-1 plasmid pLAtc3

Total Repeats: 86

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_015854	CCT	2	6	56	61	0 %	33.33 %	0 %	66.67 %	Non-Coding
2	NC_015854	ACA	2	6	217	222	66.67 %	0 %	0 %	33.33 %	Non-Coding
3	NC_015854	ACC	2	6	258	263	33.33 %	0 %	0 %	66.67 %	Non-Coding
4	NC_015854	CCG	2	6	419	424	0 %	0 %	33.33 %	66.67 %	Non-Coding
5	NC_015854	GGT	2	6	2924	2929	0 %	33.33 %	66.67 %	0 %	Non-Coding
6	NC_015854	AGA	2	6	3006	3011	66.67 %	0 %	33.33 %	0 %	Non-Coding
7	NC_015854	TCT	2	6	3070	3075	0 %	66.67 %	0 %	33.33 %	Non-Coding
8	NC_015854	ACC	2	6	3129	3134	33.33 %	0 %	0 %	66.67 %	Non-Coding
9	NC_015854	ACC	2	6	3213	3218	33.33 %	0 %	0 %	66.67 %	Non-Coding
10	NC_015854	CGG	2	6	3332	3337	0 %	0 %	66.67 %	33.33 %	Non-Coding
11	NC_015854	GAA	2	6	3707	3712	66.67 %	0 %	33.33 %	0 %	Non-Coding
12	NC_015854	CAT	2	6	3744	3749	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
13	NC_015854	GTT	2	6	3802	3807	0 %	66.67 %	33.33 %	0 %	Non-Coding
14	NC_015854	GTT	2	6	3814	3819	0 %	66.67 %	33.33 %	0 %	Non-Coding
15	NC_015854	CTG	2	6	3826	3831	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
16	NC_015854	ACC	2	6	3912	3917	33.33 %	0 %	0 %	66.67 %	Non-Coding
17	NC_015854	AGA	2	6	3927	3932	66.67 %	0 %	33.33 %	0 %	Non-Coding
18	NC_015854	GAC	2	6	4009	4014	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
19	NC_015854	GCC	2	6	7024	7029	0 %	0 %	33.33 %	66.67 %	Non-Coding
20	NC_015854	AGC	2	6	7030	7035	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
21	NC_015854	AAT	2	6	10308	10313	66.67 %	33.33 %	0 %	0 %	Non-Coding
22	NC_015854	ATG	2	6	10320	10325	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
23	NC_015854	ATA	2	6	11599	11604	66.67 %	33.33 %	0 %	0 %	Non-Coding
24	NC_015854	ATG	2	6	11619	11624	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
25	NC_015854	GAC	2	6	12367	12372	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
26	NC_015854	GAG	2	6	12502	12507	33.33 %	0 %	66.67 %	0 %	Non-Coding
27	NC_015854	GCC	2	6	12526	12531	0 %	0 %	33.33 %	66.67 %	Non-Coding
28	NC_015854	GTG	2	6	12563	12568	0 %	33.33 %	66.67 %	0 %	Non-Coding
29	NC_015854	AGA	2	6	12577	12582	66.67 %	0 %	33.33 %	0 %	Non-Coding
30	NC_015854	CCA	2	6	12595	12600	33.33 %	0 %	0 %	66.67 %	Non-Coding
31	NC_015854	AGG	2	6	12865	12870	33.33 %	0 %	66.67 %	0 %	Non-Coding
32	NC_015854	TAC	2	6	13091	13096	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
33	NC_015854	ACC	2	6	13101	13106	33.33 %	0 %	0 %	66.67 %	Non-Coding
34	NC_015854	CGG	2	6	13143	13148	0 %	0 %	66.67 %	33.33 %	Non-Coding
35	NC_015854	GTG	2	6	13166	13171	0 %	33.33 %	66.67 %	0 %	Non-Coding
36	NC_015854	TCC	2	6	13678	13683	0 %	33.33 %	0 %	66.67 %	Non-Coding
37	NC_015854	GCT	2	6	13841	13846	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
38	NC_015854	CGG	2	6	13909	13914	0 %	0 %	66.67 %	33.33 %	Non-Coding
39	NC_015854	GGT	2	6	13958	13963	0 %	33.33 %	66.67 %	0 %	Non-Coding
40	NC_015854	GCT	2	6	13964	13969	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
41	NC_015854	CTT	2	6	13997	14002	0 %	66.67 %	0 %	33.33 %	Non-Coding
42	NC_015854	TGC	2	6	14039	14044	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
43	NC_015854	TCT	2	6	14107	14112	0 %	66.67 %	0 %	33.33 %	Non-Coding
44	NC_015854	GCG	2	6	14187	14192	0 %	0 %	66.67 %	33.33 %	Non-Coding
45	NC_015854	CAT	2	6	14238	14243	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
46	NC_015854	TCC	2	6	14638	14643	0 %	33.33 %	0 %	66.67 %	Non-Coding
47	NC_015854	CGA	2	6	14678	14683	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
48	NC_015854	GGC	2	6	14715	14720	0 %	0 %	66.67 %	33.33 %	Non-Coding
49	NC_015854	TGG	2	6	14762	14767	0 %	33.33 %	66.67 %	0 %	Non-Coding
50	NC_015854	CTG	2	6	14813	14818	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
51	NC_015854	ATT	2	6	15278	15283	33.33 %	66.67 %	0 %	0 %	Non-Coding
52	NC_015854	AGA	2	6	18193	18198	66.67 %	0 %	33.33 %	0 %	Non-Coding
53	NC_015854	CAG	2	6	18943	18948	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
54	NC_015854	AAG	2	6	19061	19066	66.67 %	0 %	33.33 %	0 %	Non-Coding
55	NC_015854	TGG	2	6	19079	19084	0 %	33.33 %	66.67 %	0 %	Non-Coding
56	NC_015854	TGC	2	6	19146	19151	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
57	NC_015854	AAC	2	6	19203	19208	66.67 %	0 %	0 %	33.33 %	Non-Coding
58	NC_015854	CAC	2	6	19279	19284	33.33 %	0 %	0 %	66.67 %	Non-Coding
59	NC_015854	TAT	2	6	19289	19294	33.33 %	66.67 %	0 %	0 %	Non-Coding
60	NC_015854	AGG	2	6	19330	19335	33.33 %	0 %	66.67 %	0 %	Non-Coding
61	NC_015854	CAA	2	6	22900	22905	66.67 %	0 %	0 %	33.33 %	Non-Coding
62	NC_015854	CGA	2	6	22961	22966	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
63	NC_015854	AGT	2	6	23005	23010	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
64	NC_015854	TCG	2	6	23045	23050	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
65	NC_015854	GCG	3	9	23109	23117	0 %	0 %	66.67 %	33.33 %	Non-Coding
66	NC_015854	TGT	2	6	23308	23313	0 %	66.67 %	33.33 %	0 %	Non-Coding
67	NC_015854	CCA	2	6	25020	25025	33.33 %	0 %	0 %	66.67 %	Non-Coding
68	NC_015854	ATG	2	6	25034	25039	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
69	NC_015854	ACA	2	6	25998	26003	66.67 %	0 %	0 %	33.33 %	Non-Coding
70	NC_015854	TAA	3	9	26059	26067	66.67 %	33.33 %	0 %	0 %	Non-Coding
71	NC_015854	TAA	2	6	26086	26091	66.67 %	33.33 %	0 %	0 %	Non-Coding
72	NC_015854	GCC	2	6	26111	26116	0 %	0 %	33.33 %	66.67 %	Non-Coding
73	NC_015854	ACC	2	6	26254	26259	33.33 %	0 %	0 %	66.67 %	Non-Coding
74	NC_015854	GGT	3	9	26269	26277	0 %	33.33 %	66.67 %	0 %	Non-Coding
75	NC_015854	GCA	2	6	26286	26291	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
76	NC_015854	CAC	2	6	26318	26323	33.33 %	0 %	0 %	66.67 %	Non-Coding
77	NC_015854	CTG	2	6	26536	26541	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
78	NC_015854	TGG	2	6	26545	26550	0 %	33.33 %	66.67 %	0 %	Non-Coding
79	NC_015854	GGT	2	6	27958	27963	0 %	33.33 %	66.67 %	0 %	Non-Coding
80	NC_015854	CTT	2	6	28016	28021	0 %	66.67 %	0 %	33.33 %	Non-Coding
81	NC_015854	AGG	2	6	28126	28131	33.33 %	0 %	66.67 %	0 %	Non-Coding
82	NC_015854	TGC	2	6	28170	28175	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
83	NC_015854	GGT	2	6	28489	28494	0 %	33.33 %	66.67 %	0 %	Non-Coding
84	NC_015854	CCG	2	6	28583	28588	0 %	0 %	33.33 %	66.67 %	Non-Coding
85	NC_015854	CGC	2	6	28594	28599	0 %	0 %	33.33 %	66.67 %	Non-Coding
86	NC_015854	TGC	2	6	28634	28639	0 %	33.33 %	33.33 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.