MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Roseobacter litoralis Och 149 plasmid pRLO149_83

Total Repeats: 94

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_015728	GCC	2	6	1	6	0 %	0 %	33.33 %	66.67 %	Non-Coding
2	NC_015728	AGG	2	6	1381	1386	33.33 %	0 %	66.67 %	0 %	Non-Coding
3	NC_015728	CGT	2	6	2494	2499	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
4	NC_015728	CGC	3	9	5182	5190	0 %	0 %	33.33 %	66.67 %	Non-Coding
5	NC_015728	AGG	2	6	5304	5309	33.33 %	0 %	66.67 %	0 %	Non-Coding
6	NC_015728	AAT	2	6	6277	6282	66.67 %	33.33 %	0 %	0 %	Non-Coding
7	NC_015728	GGC	2	6	6287	6292	0 %	0 %	66.67 %	33.33 %	Non-Coding
8	NC_015728	GCT	2	6	6334	6339	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
9	NC_015728	CGC	2	6	9009	9014	0 %	0 %	33.33 %	66.67 %	Non-Coding
10	NC_015728	TGC	2	6	9068	9073	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
11	NC_015728	GCA	2	6	12462	12467	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
12	NC_015728	AGG	2	6	12546	12551	33.33 %	0 %	66.67 %	0 %	Non-Coding
13	NC_015728	CGT	2	6	13138	13143	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
14	NC_015728	GGC	2	6	14444	14449	0 %	0 %	66.67 %	33.33 %	Non-Coding
15	NC_015728	GCG	2	6	14490	14495	0 %	0 %	66.67 %	33.33 %	Non-Coding
16	NC_015728	GGA	2	6	14498	14503	33.33 %	0 %	66.67 %	0 %	Non-Coding
17	NC_015728	ATC	2	6	14788	14793	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
18	NC_015728	GTC	2	6	14817	14822	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
19	NC_015728	CCT	2	6	14826	14831	0 %	33.33 %	0 %	66.67 %	Non-Coding
20	NC_015728	CGA	2	6	15097	15102	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
21	NC_015728	TCG	2	6	15233	15238	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
22	NC_015728	TAT	2	6	15288	15293	33.33 %	66.67 %	0 %	0 %	Non-Coding
23	NC_015728	TTG	2	6	15921	15926	0 %	66.67 %	33.33 %	0 %	Non-Coding
24	NC_015728	TAG	2	6	15945	15950	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
25	NC_015728	CTC	2	6	18228	18233	0 %	33.33 %	0 %	66.67 %	Non-Coding
26	NC_015728	TGC	2	6	26957	26962	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
27	NC_015728	GTG	2	6	30504	30509	0 %	33.33 %	66.67 %	0 %	Non-Coding
28	NC_015728	TGA	2	6	30583	30588	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
29	NC_015728	CGG	2	6	31195	31200	0 %	0 %	66.67 %	33.33 %	Non-Coding
30	NC_015728	CGC	2	6	31229	31234	0 %	0 %	33.33 %	66.67 %	Non-Coding
31	NC_015728	CTG	2	6	38648	38653	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
32	NC_015728	ACT	2	6	41311	41316	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
33	NC_015728	CGT	2	6	41352	41357	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
34	NC_015728	CGG	2	6	46314	46319	0 %	0 %	66.67 %	33.33 %	Non-Coding
35	NC_015728	CGA	2	6	46472	46477	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
36	NC_015728	CGC	2	6	47217	47222	0 %	0 %	33.33 %	66.67 %	Non-Coding
37	NC_015728	CCT	2	6	47228	47233	0 %	33.33 %	0 %	66.67 %	Non-Coding
38	NC_015728	CAT	2	6	47250	47255	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
39	NC_015728	CAT	3	9	47265	47273	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
40	NC_015728	CAT	2	6	47277	47282	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
41	NC_015728	CAT	2	6	47292	47297	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
42	NC_015728	CAT	2	6	47325	47330	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
43	NC_015728	CAT	3	9	47346	47354	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
44	NC_015728	CAT	2	6	47358	47363	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
45	NC_015728	CAT	2	6	47370	47375	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
46	NC_015728	GCT	2	6	47438	47443	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
47	NC_015728	AGC	2	6	47487	47492	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
48	NC_015728	TGC	3	9	47623	47631	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
49	NC_015728	CAG	2	6	47634	47639	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
50	NC_015728	GCA	2	6	47726	47731	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
51	NC_015728	CGA	2	6	47738	47743	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
52	NC_015728	CCT	2	6	47794	47799	0 %	33.33 %	0 %	66.67 %	Non-Coding
53	NC_015728	GCA	2	6	48936	48941	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
54	NC_015728	TCC	2	6	51232	51237	0 %	33.33 %	0 %	66.67 %	Non-Coding
55	NC_015728	AGA	3	9	51265	51273	66.67 %	0 %	33.33 %	0 %	Non-Coding
56	NC_015728	CAA	2	6	51984	51989	66.67 %	0 %	0 %	33.33 %	Non-Coding
57	NC_015728	ATC	2	6	51994	51999	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
58	NC_015728	CGA	3	9	52110	52118	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
59	NC_015728	CAG	2	6	53088	53093	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
60	NC_015728	ATC	2	6	53109	53114	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
61	NC_015728	GCC	2	6	53234	53239	0 %	0 %	33.33 %	66.67 %	Non-Coding
62	NC_015728	GCC	2	6	53264	53269	0 %	0 %	33.33 %	66.67 %	Non-Coding
63	NC_015728	ATC	2	6	57384	57389	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
64	NC_015728	TTC	2	6	58875	58880	0 %	66.67 %	0 %	33.33 %	Non-Coding
65	NC_015728	GCT	2	6	58981	58986	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
66	NC_015728	CAA	2	6	58997	59002	66.67 %	0 %	0 %	33.33 %	Non-Coding
67	NC_015728	GTC	2	6	59106	59111	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
68	NC_015728	AGA	2	6	59142	59147	66.67 %	0 %	33.33 %	0 %	Non-Coding
69	NC_015728	AAG	2	6	61866	61871	66.67 %	0 %	33.33 %	0 %	Non-Coding
70	NC_015728	TTG	2	6	61887	61892	0 %	66.67 %	33.33 %	0 %	Non-Coding
71	NC_015728	GAA	2	6	61935	61940	66.67 %	0 %	33.33 %	0 %	Non-Coding
72	NC_015728	TCT	2	6	62382	62387	0 %	66.67 %	0 %	33.33 %	Non-Coding
73	NC_015728	CCT	2	6	63296	63301	0 %	33.33 %	0 %	66.67 %	Non-Coding
74	NC_015728	AAC	2	6	63325	63330	66.67 %	0 %	0 %	33.33 %	Non-Coding
75	NC_015728	GAA	2	6	66532	66537	66.67 %	0 %	33.33 %	0 %	Non-Coding
76	NC_015728	GTC	2	6	71954	71959	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
77	NC_015728	TCG	2	6	71962	71967	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
78	NC_015728	CCA	2	6	72356	72361	33.33 %	0 %	0 %	66.67 %	Non-Coding
79	NC_015728	CGC	2	6	73053	73058	0 %	0 %	33.33 %	66.67 %	Non-Coding
80	NC_015728	GCG	2	6	73059	73064	0 %	0 %	66.67 %	33.33 %	Non-Coding
81	NC_015728	AAC	2	6	73086	73091	66.67 %	0 %	0 %	33.33 %	Non-Coding
82	NC_015728	GAC	2	6	73102	73107	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
83	NC_015728	GAT	2	6	78004	78009	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
84	NC_015728	ACC	2	6	79619	79624	33.33 %	0 %	0 %	66.67 %	Non-Coding
85	NC_015728	GCC	2	6	79640	79645	0 %	0 %	33.33 %	66.67 %	Non-Coding
86	NC_015728	GGC	2	6	79658	79663	0 %	0 %	66.67 %	33.33 %	Non-Coding
87	NC_015728	ACC	2	6	81572	81577	33.33 %	0 %	0 %	66.67 %	Non-Coding
88	NC_015728	CGG	2	6	81589	81594	0 %	0 %	66.67 %	33.33 %	Non-Coding
89	NC_015728	CGG	3	9	81645	81653	0 %	0 %	66.67 %	33.33 %	Non-Coding
90	NC_015728	CGC	2	6	81676	81681	0 %	0 %	33.33 %	66.67 %	Non-Coding
91	NC_015728	TGT	3	9	82136	82144	0 %	66.67 %	33.33 %	0 %	Non-Coding
92	NC_015728	TCC	2	6	82819	82824	0 %	33.33 %	0 %	66.67 %	Non-Coding
93	NC_015728	GAC	2	6	82852	82857	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
94	NC_015728	AAT	2	6	82984	82989	66.67 %	33.33 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.