MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Treponema paraluiscuniculi Cuniculi A chromosome

Total Repeats: 24

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_015714	TGGTTG	2	12	135045	135056	0 %	50 %	50 %	0 %	Non-Coding
2	NC_015714	CCGGAG	2	12	136143	136154	16.67 %	0 %	50 %	33.33 %	Non-Coding
3	NC_015714	CAGCTG	2	12	136368	136379	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
4	NC_015714	GGCTTG	2	12	150175	150186	0 %	33.33 %	50 %	16.67 %	Non-Coding
5	NC_015714	CTGCGG	3	18	150253	150270	0 %	16.67 %	50 %	33.33 %	Non-Coding
6	NC_015714	TGGTTG	2	12	150999	151010	0 %	50 %	50 %	0 %	Non-Coding
7	NC_015714	CCGGAG	2	12	152097	152108	16.67 %	0 %	50 %	33.33 %	Non-Coding
8	NC_015714	CAGCTG	2	12	152322	152333	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
9	NC_015714	AGCCCC	2	12	156786	156797	16.67 %	0 %	16.67 %	66.67 %	Non-Coding
10	NC_015714	GTGCGA	2	12	232102	232113	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
11	NC_015714	TCCTTC	2	12	233483	233494	0 %	50 %	0 %	50 %	Non-Coding
12	NC_015714	GTGCGA	2	12	280499	280510	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
13	NC_015714	TCCTTC	2	12	281880	281891	0 %	50 %	0 %	50 %	Non-Coding
14	NC_015714	AATATA	2	12	350763	350774	66.67 %	33.33 %	0 %	0 %	Non-Coding
15	NC_015714	TTTCCG	2	12	368023	368034	0 %	50 %	16.67 %	33.33 %	Non-Coding
16	NC_015714	TTCTCC	2	12	692456	692467	0 %	50 %	0 %	50 %	Non-Coding
17	NC_015714	ACGCAG	2	12	803863	803874	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
18	NC_015714	ACACGC	2	12	812698	812709	33.33 %	0 %	16.67 %	50 %	Non-Coding
19	NC_015714	GCAGGG	2	12	821150	821161	16.67 %	0 %	66.67 %	16.67 %	Non-Coding
20	NC_015714	CAGAGA	2	12	846885	846896	50 %	0 %	33.33 %	16.67 %	Non-Coding
21	NC_015714	GTGCAC	2	12	863169	863180	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
22	NC_015714	CCATCC	2	12	883671	883682	16.67 %	16.67 %	0 %	66.67 %	Non-Coding
23	NC_015714	GAGCAG	2	12	988895	988906	33.33 %	0 %	50 %	16.67 %	Non-Coding
24	NC_015714	AGGGGG	2	12	1106768	1106779	16.67 %	0 %	83.33 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.