MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Runella slithyformis DSM 19594 plasmid pRUNSL04

Total Repeats: 80

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_015705	TAC	2	6	150	155	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
2	NC_015705	GCC	2	6	203	208	0 %	0 %	33.33 %	66.67 %	Non-Coding
3	NC_015705	GCA	2	6	1567	1572	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
4	NC_015705	AAG	2	6	1638	1643	66.67 %	0 %	33.33 %	0 %	Non-Coding
5	NC_015705	GCC	2	6	1893	1898	0 %	0 %	33.33 %	66.67 %	Non-Coding
6	NC_015705	CGC	2	6	1969	1974	0 %	0 %	33.33 %	66.67 %	Non-Coding
7	NC_015705	GTT	2	6	2047	2052	0 %	66.67 %	33.33 %	0 %	Non-Coding
8	NC_015705	TTC	2	6	3975	3980	0 %	66.67 %	0 %	33.33 %	Non-Coding
9	NC_015705	ATC	2	6	4047	4052	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
10	NC_015705	GCG	2	6	4205	4210	0 %	0 %	66.67 %	33.33 %	Non-Coding
11	NC_015705	CTG	2	6	4247	4252	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
12	NC_015705	GGC	2	6	4334	4339	0 %	0 %	66.67 %	33.33 %	Non-Coding
13	NC_015705	GTT	2	6	4390	4395	0 %	66.67 %	33.33 %	0 %	Non-Coding
14	NC_015705	GCT	2	6	4466	4471	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
15	NC_015705	TAC	2	6	4527	4532	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
16	NC_015705	CTG	2	6	4554	4559	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
17	NC_015705	TCT	2	6	4747	4752	0 %	66.67 %	0 %	33.33 %	Non-Coding
18	NC_015705	TGA	2	6	4754	4759	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
19	NC_015705	GCT	2	6	4800	4805	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
20	NC_015705	ATT	2	6	4898	4903	33.33 %	66.67 %	0 %	0 %	Non-Coding
21	NC_015705	TAG	2	6	4927	4932	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
22	NC_015705	ACA	2	6	4960	4965	66.67 %	0 %	0 %	33.33 %	Non-Coding
23	NC_015705	TAT	2	6	5084	5089	33.33 %	66.67 %	0 %	0 %	Non-Coding
24	NC_015705	TAC	2	6	6184	6189	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
25	NC_015705	TAC	2	6	6216	6221	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
26	NC_015705	TGT	2	6	6320	6325	0 %	66.67 %	33.33 %	0 %	Non-Coding
27	NC_015705	AAT	2	6	6330	6335	66.67 %	33.33 %	0 %	0 %	Non-Coding
28	NC_015705	TAT	2	6	6403	6408	33.33 %	66.67 %	0 %	0 %	Non-Coding
29	NC_015705	TAC	2	6	6415	6420	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
30	NC_015705	TAC	2	6	6436	6441	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
31	NC_015705	TAT	2	6	6456	6461	33.33 %	66.67 %	0 %	0 %	Non-Coding
32	NC_015705	TAC	2	6	6468	6473	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
33	NC_015705	TAC	2	6	6489	6494	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
34	NC_015705	TAT	2	6	6499	6504	33.33 %	66.67 %	0 %	0 %	Non-Coding
35	NC_015705	TAC	2	6	6511	6516	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
36	NC_015705	TAC	2	6	6590	6595	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
37	NC_015705	AAC	2	6	8179	8184	66.67 %	0 %	0 %	33.33 %	Non-Coding
38	NC_015705	ACC	2	6	8216	8221	33.33 %	0 %	0 %	66.67 %	Non-Coding
39	NC_015705	CCA	2	6	8243	8248	33.33 %	0 %	0 %	66.67 %	Non-Coding
40	NC_015705	ATT	2	6	8263	8268	33.33 %	66.67 %	0 %	0 %	Non-Coding
41	NC_015705	CTT	2	6	8292	8297	0 %	66.67 %	0 %	33.33 %	Non-Coding
42	NC_015705	CAT	2	6	8320	8325	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
43	NC_015705	TAG	2	6	8396	8401	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
44	NC_015705	CCG	2	6	8409	8414	0 %	0 %	33.33 %	66.67 %	Non-Coding
45	NC_015705	ATG	2	6	8420	8425	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
46	NC_015705	GCC	3	9	8485	8493	0 %	0 %	33.33 %	66.67 %	Non-Coding
47	NC_015705	TGA	3	9	8507	8515	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
48	NC_015705	ATA	2	6	8611	8616	66.67 %	33.33 %	0 %	0 %	Non-Coding
49	NC_015705	TGC	2	6	11645	11650	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
50	NC_015705	TTA	2	6	15980	15985	33.33 %	66.67 %	0 %	0 %	Non-Coding
51	NC_015705	CAA	2	6	16009	16014	66.67 %	0 %	0 %	33.33 %	Non-Coding
52	NC_015705	CAG	2	6	18585	18590	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
53	NC_015705	TGT	2	6	20642	20647	0 %	66.67 %	33.33 %	0 %	Non-Coding
54	NC_015705	TGA	2	6	21558	21563	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
55	NC_015705	GTA	2	6	21651	21656	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
56	NC_015705	TTA	2	6	21750	21755	33.33 %	66.67 %	0 %	0 %	Non-Coding
57	NC_015705	CAA	2	6	21873	21878	66.67 %	0 %	0 %	33.33 %	Non-Coding
58	NC_015705	ATC	2	6	21879	21884	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
59	NC_015705	GAA	2	6	21925	21930	66.67 %	0 %	33.33 %	0 %	Non-Coding
60	NC_015705	TCC	2	6	21946	21951	0 %	33.33 %	0 %	66.67 %	Non-Coding
61	NC_015705	CGA	2	6	22018	22023	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
62	NC_015705	ATA	2	6	22071	22076	66.67 %	33.33 %	0 %	0 %	Non-Coding
63	NC_015705	ATG	2	6	22411	22416	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
64	NC_015705	ATT	2	6	22774	22779	33.33 %	66.67 %	0 %	0 %	Non-Coding
65	NC_015705	AGT	2	6	24217	24222	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
66	NC_015705	GGC	2	6	26804	26809	0 %	0 %	66.67 %	33.33 %	Non-Coding
67	NC_015705	CCT	2	6	26812	26817	0 %	33.33 %	0 %	66.67 %	Non-Coding
68	NC_015705	TTC	2	6	26824	26829	0 %	66.67 %	0 %	33.33 %	Non-Coding
69	NC_015705	TCG	2	6	35544	35549	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
70	NC_015705	AAC	2	6	35677	35682	66.67 %	0 %	0 %	33.33 %	Non-Coding
71	NC_015705	CTG	2	6	35690	35695	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
72	NC_015705	GTT	2	6	35712	35717	0 %	66.67 %	33.33 %	0 %	Non-Coding
73	NC_015705	ACT	2	6	41832	41837	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
74	NC_015705	AAC	2	6	43324	43329	66.67 %	0 %	0 %	33.33 %	Non-Coding
75	NC_015705	CAA	2	6	43658	43663	66.67 %	0 %	0 %	33.33 %	Non-Coding
76	NC_015705	AAT	2	6	43769	43774	66.67 %	33.33 %	0 %	0 %	Non-Coding
77	NC_015705	TAA	2	6	43826	43831	66.67 %	33.33 %	0 %	0 %	Non-Coding
78	NC_015705	ATT	2	6	44597	44602	33.33 %	66.67 %	0 %	0 %	Non-Coding
79	NC_015705	TTC	2	6	44603	44608	0 %	66.67 %	0 %	33.33 %	Non-Coding
80	NC_015705	GAA	3	9	44634	44642	66.67 %	0 %	33.33 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.