MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Sphingobium chlorophenolicum L-1 plasmid pSPHCH01

Total Repeats: 139

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_015595	TCG	2	6	13	18	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
2	NC_015595	CTC	2	6	160	165	0 %	33.33 %	0 %	66.67 %	Non-Coding
3	NC_015595	GAA	2	6	225	230	66.67 %	0 %	33.33 %	0 %	Non-Coding
4	NC_015595	CGC	2	6	237	242	0 %	0 %	33.33 %	66.67 %	Non-Coding
5	NC_015595	GCG	2	6	250	255	0 %	0 %	66.67 %	33.33 %	Non-Coding
6	NC_015595	ATG	2	6	711	716	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
7	NC_015595	CCG	2	6	931	936	0 %	0 %	33.33 %	66.67 %	Non-Coding
8	NC_015595	CGG	2	6	943	948	0 %	0 %	66.67 %	33.33 %	Non-Coding
9	NC_015595	TCG	2	6	6458	6463	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
10	NC_015595	CGG	2	6	6465	6470	0 %	0 %	66.67 %	33.33 %	Non-Coding
11	NC_015595	GCC	2	6	6504	6509	0 %	0 %	33.33 %	66.67 %	Non-Coding
12	NC_015595	CCT	2	6	6886	6891	0 %	33.33 %	0 %	66.67 %	Non-Coding
13	NC_015595	TCT	2	6	6998	7003	0 %	66.67 %	0 %	33.33 %	Non-Coding
14	NC_015595	CTT	2	6	7538	7543	0 %	66.67 %	0 %	33.33 %	Non-Coding
15	NC_015595	GCG	2	6	7834	7839	0 %	0 %	66.67 %	33.33 %	Non-Coding
16	NC_015595	GAT	2	6	7875	7880	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
17	NC_015595	GCG	2	6	14206	14211	0 %	0 %	66.67 %	33.33 %	Non-Coding
18	NC_015595	GCG	2	6	14222	14227	0 %	0 %	66.67 %	33.33 %	Non-Coding
19	NC_015595	GCG	2	6	14297	14302	0 %	0 %	66.67 %	33.33 %	Non-Coding
20	NC_015595	GCC	2	6	14364	14369	0 %	0 %	33.33 %	66.67 %	Non-Coding
21	NC_015595	GCG	2	6	19993	19998	0 %	0 %	66.67 %	33.33 %	Non-Coding
22	NC_015595	CTT	2	6	20052	20057	0 %	66.67 %	0 %	33.33 %	Non-Coding
23	NC_015595	GAT	2	6	31786	31791	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
24	NC_015595	ACC	2	6	34804	34809	33.33 %	0 %	0 %	66.67 %	Non-Coding
25	NC_015595	AAC	2	6	35952	35957	66.67 %	0 %	0 %	33.33 %	Non-Coding
26	NC_015595	AAC	2	6	35968	35973	66.67 %	0 %	0 %	33.33 %	Non-Coding
27	NC_015595	GAG	2	6	38997	39002	33.33 %	0 %	66.67 %	0 %	Non-Coding
28	NC_015595	CAT	2	6	41042	41047	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
29	NC_015595	AGT	2	6	41780	41785	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
30	NC_015595	TCT	2	6	43026	43031	0 %	66.67 %	0 %	33.33 %	Non-Coding
31	NC_015595	AGC	2	6	48375	48380	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
32	NC_015595	GCG	2	6	48396	48401	0 %	0 %	66.67 %	33.33 %	Non-Coding
33	NC_015595	GAA	2	6	48451	48456	66.67 %	0 %	33.33 %	0 %	Non-Coding
34	NC_015595	CAG	2	6	48492	48497	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
35	NC_015595	CAG	2	6	48529	48534	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
36	NC_015595	CCT	2	6	48646	48651	0 %	33.33 %	0 %	66.67 %	Non-Coding
37	NC_015595	AGC	2	6	48691	48696	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
38	NC_015595	GCC	2	6	48789	48794	0 %	0 %	33.33 %	66.67 %	Non-Coding
39	NC_015595	CAG	2	6	49190	49195	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
40	NC_015595	CCA	2	6	49203	49208	33.33 %	0 %	0 %	66.67 %	Non-Coding
41	NC_015595	TGA	2	6	50114	50119	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
42	NC_015595	CGG	2	6	56496	56501	0 %	0 %	66.67 %	33.33 %	Non-Coding
43	NC_015595	GCG	2	6	56502	56507	0 %	0 %	66.67 %	33.33 %	Non-Coding
44	NC_015595	CGG	2	6	56534	56539	0 %	0 %	66.67 %	33.33 %	Non-Coding
45	NC_015595	CTT	2	6	61180	61185	0 %	66.67 %	0 %	33.33 %	Non-Coding
46	NC_015595	CCG	2	6	62397	62402	0 %	0 %	33.33 %	66.67 %	Non-Coding
47	NC_015595	CGG	2	6	62415	62420	0 %	0 %	66.67 %	33.33 %	Non-Coding
48	NC_015595	CGT	2	6	63190	63195	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
49	NC_015595	CGG	2	6	63324	63329	0 %	0 %	66.67 %	33.33 %	Non-Coding
50	NC_015595	CCG	2	6	63405	63410	0 %	0 %	33.33 %	66.67 %	Non-Coding
51	NC_015595	CAC	2	6	63462	63467	33.33 %	0 %	0 %	66.67 %	Non-Coding
52	NC_015595	CGG	2	6	64010	64015	0 %	0 %	66.67 %	33.33 %	Non-Coding
53	NC_015595	CGC	2	6	64019	64024	0 %	0 %	33.33 %	66.67 %	Non-Coding
54	NC_015595	CGG	2	6	64504	64509	0 %	0 %	66.67 %	33.33 %	Non-Coding
55	NC_015595	GCG	2	6	64523	64528	0 %	0 %	66.67 %	33.33 %	Non-Coding
56	NC_015595	CGG	2	6	64590	64595	0 %	0 %	66.67 %	33.33 %	Non-Coding
57	NC_015595	CCT	2	6	64604	64609	0 %	33.33 %	0 %	66.67 %	Non-Coding
58	NC_015595	CGG	2	6	64613	64618	0 %	0 %	66.67 %	33.33 %	Non-Coding
59	NC_015595	CGA	3	9	65035	65043	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
60	NC_015595	GGC	2	6	65637	65642	0 %	0 %	66.67 %	33.33 %	Non-Coding
61	NC_015595	GCT	2	6	65727	65732	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
62	NC_015595	GCA	2	6	65827	65832	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
63	NC_015595	GCT	2	6	66080	66085	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
64	NC_015595	GGA	2	6	66099	66104	33.33 %	0 %	66.67 %	0 %	Non-Coding
65	NC_015595	ATC	2	6	66148	66153	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
66	NC_015595	TCC	2	6	66181	66186	0 %	33.33 %	0 %	66.67 %	Non-Coding
67	NC_015595	GCC	2	6	66282	66287	0 %	0 %	33.33 %	66.67 %	Non-Coding
68	NC_015595	CGG	2	6	66316	66321	0 %	0 %	66.67 %	33.33 %	Non-Coding
69	NC_015595	CGC	2	6	66818	66823	0 %	0 %	33.33 %	66.67 %	Non-Coding
70	NC_015595	GCC	2	6	68918	68923	0 %	0 %	33.33 %	66.67 %	Non-Coding
71	NC_015595	TGC	2	6	68927	68932	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
72	NC_015595	GAA	2	6	68966	68971	66.67 %	0 %	33.33 %	0 %	Non-Coding
73	NC_015595	TAT	2	6	70857	70862	33.33 %	66.67 %	0 %	0 %	Non-Coding
74	NC_015595	ATA	2	6	72596	72601	66.67 %	33.33 %	0 %	0 %	Non-Coding
75	NC_015595	GCT	2	6	72693	72698	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
76	NC_015595	CGA	2	6	73054	73059	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
77	NC_015595	GCC	2	6	73123	73128	0 %	0 %	33.33 %	66.67 %	Non-Coding
78	NC_015595	AGG	2	6	73225	73230	33.33 %	0 %	66.67 %	0 %	Non-Coding
79	NC_015595	AGC	2	6	76503	76508	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
80	NC_015595	TCG	2	6	76558	76563	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
81	NC_015595	TCG	2	6	76603	76608	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
82	NC_015595	GCC	2	6	76641	76646	0 %	0 %	33.33 %	66.67 %	Non-Coding
83	NC_015595	GTC	2	6	76680	76685	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
84	NC_015595	TGA	2	6	79079	79084	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
85	NC_015595	CAG	2	6	79208	79213	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
86	NC_015595	GTC	2	6	85865	85870	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
87	NC_015595	CGG	2	6	85891	85896	0 %	0 %	66.67 %	33.33 %	Non-Coding
88	NC_015595	GCG	2	6	85897	85902	0 %	0 %	66.67 %	33.33 %	Non-Coding
89	NC_015595	GGT	2	6	85935	85940	0 %	33.33 %	66.67 %	0 %	Non-Coding
90	NC_015595	GCG	2	6	85945	85950	0 %	0 %	66.67 %	33.33 %	Non-Coding
91	NC_015595	GTG	2	6	85965	85970	0 %	33.33 %	66.67 %	0 %	Non-Coding
92	NC_015595	CTT	2	6	86048	86053	0 %	66.67 %	0 %	33.33 %	Non-Coding
93	NC_015595	GCG	2	6	86117	86122	0 %	0 %	66.67 %	33.33 %	Non-Coding
94	NC_015595	ATG	3	9	86160	86168	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
95	NC_015595	TCA	2	6	87155	87160	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
96	NC_015595	CGA	2	6	87324	87329	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
97	NC_015595	CCT	2	6	93774	93779	0 %	33.33 %	0 %	66.67 %	Non-Coding
98	NC_015595	GGC	2	6	93807	93812	0 %	0 %	66.67 %	33.33 %	Non-Coding
99	NC_015595	GAG	2	6	95386	95391	33.33 %	0 %	66.67 %	0 %	Non-Coding
100	NC_015595	GCG	2	6	95411	95416	0 %	0 %	66.67 %	33.33 %	Non-Coding
101	NC_015595	CAA	2	6	95454	95459	66.67 %	0 %	0 %	33.33 %	Non-Coding
102	NC_015595	CCG	2	6	95495	95500	0 %	0 %	33.33 %	66.67 %	Non-Coding
103	NC_015595	GCC	2	6	95532	95537	0 %	0 %	33.33 %	66.67 %	Non-Coding
104	NC_015595	CAT	2	6	95577	95582	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
105	NC_015595	GCA	2	6	97233	97238	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
106	NC_015595	AGC	2	6	97360	97365	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
107	NC_015595	TGC	2	6	97371	97376	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
108	NC_015595	GCG	2	6	97396	97401	0 %	0 %	66.67 %	33.33 %	Non-Coding
109	NC_015595	TGC	2	6	97414	97419	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
110	NC_015595	AGG	2	6	101455	101460	33.33 %	0 %	66.67 %	0 %	Non-Coding
111	NC_015595	CGA	2	6	101634	101639	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
112	NC_015595	GCG	2	6	101678	101683	0 %	0 %	66.67 %	33.33 %	Non-Coding
113	NC_015595	GCA	2	6	105569	105574	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
114	NC_015595	GGC	2	6	105585	105590	0 %	0 %	66.67 %	33.33 %	Non-Coding
115	NC_015595	TCG	2	6	105641	105646	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
116	NC_015595	ATT	2	6	107104	107109	33.33 %	66.67 %	0 %	0 %	Non-Coding
117	NC_015595	TGC	2	6	108467	108472	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
118	NC_015595	GGC	2	6	114858	114863	0 %	0 %	66.67 %	33.33 %	Non-Coding
119	NC_015595	GGC	2	6	115083	115088	0 %	0 %	66.67 %	33.33 %	Non-Coding
120	NC_015595	GCT	2	6	115115	115120	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
121	NC_015595	CAT	2	6	115278	115283	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
122	NC_015595	CGT	3	9	115287	115295	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
123	NC_015595	GCA	2	6	115304	115309	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
124	NC_015595	CCG	2	6	115329	115334	0 %	0 %	33.33 %	66.67 %	Non-Coding
125	NC_015595	TCA	2	6	115336	115341	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
126	NC_015595	ACG	2	6	115353	115358	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
127	NC_015595	AGC	2	6	115487	115492	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
128	NC_015595	TCT	2	6	115522	115527	0 %	66.67 %	0 %	33.33 %	Non-Coding
129	NC_015595	TTG	2	6	115536	115541	0 %	66.67 %	33.33 %	0 %	Non-Coding
130	NC_015595	GAC	2	6	116394	116399	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
131	NC_015595	AAC	2	6	116404	116409	66.67 %	0 %	0 %	33.33 %	Non-Coding
132	NC_015595	ACC	2	6	116506	116511	33.33 %	0 %	0 %	66.67 %	Non-Coding
133	NC_015595	TGC	2	6	116528	116533	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
134	NC_015595	GAA	2	6	116998	117003	66.67 %	0 %	33.33 %	0 %	Non-Coding
135	NC_015595	CTT	2	6	117027	117032	0 %	66.67 %	0 %	33.33 %	Non-Coding
136	NC_015595	TGA	2	6	123613	123618	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
137	NC_015595	TGA	2	6	123630	123635	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
138	NC_015595	GAT	2	6	123716	123721	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
139	NC_015595	TCA	2	6	123726	123731	33.33 %	33.33 %	0 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.