Penta-nucleotide Repeats of Haliscomenobacter hydrossis DSM 1100 plasmid pHALHY02
Total Repeats: 118
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_015512 | GCAGA | 2 | 10 | 2714 | 2723 | 40 % | 0 % | 40 % | 20 % | 332661893 |
2 | NC_015512 | GGGGA | 2 | 10 | 3493 | 3502 | 20 % | 0 % | 80 % | 0 % | 332661894 |
3 | NC_015512 | CCTAT | 2 | 10 | 3884 | 3893 | 20 % | 40 % | 0 % | 40 % | 332661894 |
4 | NC_015512 | GGAAG | 2 | 10 | 5789 | 5798 | 40 % | 0 % | 60 % | 0 % | 332661894 |
5 | NC_015512 | GATAA | 2 | 10 | 6117 | 6126 | 60 % | 20 % | 20 % | 0 % | 332661895 |
6 | NC_015512 | TAAAT | 2 | 10 | 8169 | 8178 | 60 % | 40 % | 0 % | 0 % | 332661896 |
7 | NC_015512 | TAATT | 2 | 10 | 8185 | 8194 | 40 % | 60 % | 0 % | 0 % | 332661896 |
8 | NC_015512 | AGCAA | 2 | 10 | 13576 | 13585 | 60 % | 0 % | 20 % | 20 % | 332661900 |
9 | NC_015512 | AAATT | 2 | 10 | 15835 | 15844 | 60 % | 40 % | 0 % | 0 % | 332661902 |
10 | NC_015512 | GGGTT | 2 | 10 | 16832 | 16841 | 0 % | 40 % | 60 % | 0 % | 332661903 |
11 | NC_015512 | CAATT | 2 | 10 | 17701 | 17710 | 40 % | 40 % | 0 % | 20 % | 332661903 |
12 | NC_015512 | TAGGG | 2 | 10 | 19417 | 19426 | 20 % | 20 % | 60 % | 0 % | 332661904 |
13 | NC_015512 | CAAAC | 2 | 10 | 19454 | 19463 | 60 % | 0 % | 0 % | 40 % | 332661904 |
14 | NC_015512 | TAGGG | 2 | 10 | 22267 | 22276 | 20 % | 20 % | 60 % | 0 % | 332661906 |
15 | NC_015512 | GTAGG | 2 | 10 | 25104 | 25113 | 20 % | 20 % | 60 % | 0 % | 332661907 |
16 | NC_015512 | ACCAG | 2 | 10 | 25491 | 25500 | 40 % | 0 % | 20 % | 40 % | 332661907 |
17 | NC_015512 | CCCAG | 2 | 10 | 26948 | 26957 | 20 % | 0 % | 20 % | 60 % | 332661907 |
18 | NC_015512 | GCTGG | 2 | 10 | 27926 | 27935 | 0 % | 20 % | 60 % | 20 % | 332661908 |
19 | NC_015512 | GGGCG | 2 | 10 | 28206 | 28215 | 0 % | 0 % | 80 % | 20 % | 332661908 |
20 | NC_015512 | GGTTT | 2 | 10 | 29588 | 29597 | 0 % | 60 % | 40 % | 0 % | 332661908 |
21 | NC_015512 | TTTCA | 2 | 10 | 30257 | 30266 | 20 % | 60 % | 0 % | 20 % | 332661908 |
22 | NC_015512 | GGGAA | 2 | 10 | 30496 | 30505 | 40 % | 0 % | 60 % | 0 % | 332661908 |
23 | NC_015512 | AAACC | 2 | 10 | 31383 | 31392 | 60 % | 0 % | 0 % | 40 % | 332661909 |
24 | NC_015512 | TGCTT | 2 | 10 | 32387 | 32396 | 0 % | 60 % | 20 % | 20 % | Non-Coding |
25 | NC_015512 | GTTGG | 2 | 10 | 34122 | 34131 | 0 % | 40 % | 60 % | 0 % | 332661912 |
26 | NC_015512 | TTGGT | 2 | 10 | 34585 | 34594 | 0 % | 60 % | 40 % | 0 % | 332661912 |
27 | NC_015512 | GCAAG | 2 | 10 | 36423 | 36432 | 40 % | 0 % | 40 % | 20 % | Non-Coding |
28 | NC_015512 | AGCCG | 2 | 10 | 38323 | 38332 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
29 | NC_015512 | GCTGC | 2 | 10 | 41255 | 41264 | 0 % | 20 % | 40 % | 40 % | 332661919 |
30 | NC_015512 | TGCCA | 2 | 10 | 41760 | 41769 | 20 % | 20 % | 20 % | 40 % | 332661919 |
31 | NC_015512 | TGGGG | 2 | 10 | 44358 | 44367 | 0 % | 20 % | 80 % | 0 % | Non-Coding |
32 | NC_015512 | GTGGG | 2 | 10 | 44395 | 44404 | 0 % | 20 % | 80 % | 0 % | Non-Coding |
33 | NC_015512 | TGGGG | 2 | 10 | 46140 | 46149 | 0 % | 20 % | 80 % | 0 % | Non-Coding |
34 | NC_015512 | GTTAG | 2 | 10 | 46211 | 46220 | 20 % | 40 % | 40 % | 0 % | 332661923 |
35 | NC_015512 | GTTGA | 2 | 10 | 47366 | 47375 | 20 % | 40 % | 40 % | 0 % | 332661923 |
36 | NC_015512 | GCGCA | 2 | 10 | 47717 | 47726 | 20 % | 0 % | 40 % | 40 % | 332661923 |
37 | NC_015512 | ATTTT | 2 | 10 | 48328 | 48337 | 20 % | 80 % | 0 % | 0 % | Non-Coding |
38 | NC_015512 | GCTGC | 2 | 10 | 49561 | 49570 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
39 | NC_015512 | GCTCC | 2 | 10 | 49610 | 49619 | 0 % | 20 % | 20 % | 60 % | Non-Coding |
40 | NC_015512 | TGCGG | 2 | 10 | 49699 | 49708 | 0 % | 20 % | 60 % | 20 % | Non-Coding |
41 | NC_015512 | TTTCT | 2 | 10 | 50297 | 50306 | 0 % | 80 % | 0 % | 20 % | Non-Coding |
42 | NC_015512 | AGTCA | 2 | 10 | 51854 | 51863 | 40 % | 20 % | 20 % | 20 % | Non-Coding |
43 | NC_015512 | CATTT | 2 | 10 | 52044 | 52053 | 20 % | 60 % | 0 % | 20 % | 332661928 |
44 | NC_015512 | GGCCA | 2 | 10 | 52095 | 52104 | 20 % | 0 % | 40 % | 40 % | 332661928 |
45 | NC_015512 | AAATA | 2 | 10 | 52815 | 52824 | 80 % | 20 % | 0 % | 0 % | Non-Coding |
46 | NC_015512 | TTGAA | 2 | 10 | 53040 | 53049 | 40 % | 40 % | 20 % | 0 % | 332661929 |
47 | NC_015512 | GGGAA | 2 | 10 | 55518 | 55527 | 40 % | 0 % | 60 % | 0 % | 332661932 |
48 | NC_015512 | TGGGT | 2 | 10 | 56209 | 56218 | 0 % | 40 % | 60 % | 0 % | Non-Coding |
49 | NC_015512 | GACCA | 2 | 10 | 56490 | 56499 | 40 % | 0 % | 20 % | 40 % | 332661934 |
50 | NC_015512 | TGTTA | 2 | 10 | 57656 | 57665 | 20 % | 60 % | 20 % | 0 % | Non-Coding |
51 | NC_015512 | CAATC | 2 | 10 | 57726 | 57735 | 40 % | 20 % | 0 % | 40 % | 332661936 |
52 | NC_015512 | TCTTG | 2 | 10 | 57749 | 57758 | 0 % | 60 % | 20 % | 20 % | 332661936 |
53 | NC_015512 | GATTG | 2 | 10 | 58111 | 58120 | 20 % | 40 % | 40 % | 0 % | 332661936 |
54 | NC_015512 | TGGTT | 2 | 10 | 61245 | 61254 | 0 % | 60 % | 40 % | 0 % | 332661937 |
55 | NC_015512 | AATTC | 2 | 10 | 61767 | 61776 | 40 % | 40 % | 0 % | 20 % | 332661937 |
56 | NC_015512 | CTATT | 2 | 10 | 61915 | 61924 | 20 % | 60 % | 0 % | 20 % | 332661937 |
57 | NC_015512 | ATTGA | 2 | 10 | 63161 | 63170 | 40 % | 40 % | 20 % | 0 % | 332661937 |
58 | NC_015512 | CTCCC | 2 | 10 | 63747 | 63756 | 0 % | 20 % | 0 % | 80 % | Non-Coding |
59 | NC_015512 | TCCCC | 2 | 10 | 64004 | 64013 | 0 % | 20 % | 0 % | 80 % | 332661938 |
60 | NC_015512 | AGCGG | 2 | 10 | 65696 | 65705 | 20 % | 0 % | 60 % | 20 % | 332661939 |
61 | NC_015512 | CCAAG | 2 | 10 | 69864 | 69873 | 40 % | 0 % | 20 % | 40 % | 332661943 |
62 | NC_015512 | CCCAC | 2 | 10 | 71675 | 71684 | 20 % | 0 % | 0 % | 80 % | 332661944 |
63 | NC_015512 | AGCGG | 2 | 10 | 71778 | 71787 | 20 % | 0 % | 60 % | 20 % | 332661944 |
64 | NC_015512 | GCCCA | 2 | 10 | 71894 | 71903 | 20 % | 0 % | 20 % | 60 % | 332661944 |
65 | NC_015512 | CAAAC | 2 | 10 | 72522 | 72531 | 60 % | 0 % | 0 % | 40 % | 332661946 |
66 | NC_015512 | GCGAA | 2 | 10 | 76468 | 76477 | 40 % | 0 % | 40 % | 20 % | 332661949 |
67 | NC_015512 | TAAAA | 2 | 10 | 77658 | 77667 | 80 % | 20 % | 0 % | 0 % | 332661950 |
68 | NC_015512 | TTCCT | 2 | 10 | 82824 | 82833 | 0 % | 60 % | 0 % | 40 % | 332661952 |
69 | NC_015512 | GAAAA | 2 | 10 | 84412 | 84421 | 80 % | 0 % | 20 % | 0 % | 332661953 |
70 | NC_015512 | AGCCA | 2 | 10 | 85302 | 85311 | 40 % | 0 % | 20 % | 40 % | 332661955 |
71 | NC_015512 | ATTTT | 2 | 10 | 85882 | 85891 | 20 % | 80 % | 0 % | 0 % | Non-Coding |
72 | NC_015512 | GAATG | 2 | 10 | 89543 | 89552 | 40 % | 20 % | 40 % | 0 % | Non-Coding |
73 | NC_015512 | CTTTT | 2 | 10 | 90367 | 90376 | 0 % | 80 % | 0 % | 20 % | Non-Coding |
74 | NC_015512 | ACAAA | 2 | 10 | 90502 | 90511 | 80 % | 0 % | 0 % | 20 % | Non-Coding |
75 | NC_015512 | ATTGG | 2 | 10 | 92445 | 92454 | 20 % | 40 % | 40 % | 0 % | 332661962 |
76 | NC_015512 | TGTAG | 2 | 10 | 96622 | 96631 | 20 % | 40 % | 40 % | 0 % | Non-Coding |
77 | NC_015512 | CCGAC | 2 | 10 | 97074 | 97083 | 20 % | 0 % | 20 % | 60 % | Non-Coding |
78 | NC_015512 | TGCAC | 2 | 10 | 97726 | 97735 | 20 % | 20 % | 20 % | 40 % | 332661967 |
79 | NC_015512 | GGCCA | 2 | 10 | 98814 | 98823 | 20 % | 0 % | 40 % | 40 % | 332661967 |
80 | NC_015512 | CGATC | 2 | 10 | 98947 | 98956 | 20 % | 20 % | 20 % | 40 % | 332661967 |
81 | NC_015512 | ACCGT | 2 | 10 | 99006 | 99015 | 20 % | 20 % | 20 % | 40 % | 332661967 |
82 | NC_015512 | CAAAG | 2 | 10 | 99040 | 99049 | 60 % | 0 % | 20 % | 20 % | 332661967 |
83 | NC_015512 | CCACA | 2 | 10 | 99492 | 99501 | 40 % | 0 % | 0 % | 60 % | 332661967 |
84 | NC_015512 | AACAA | 2 | 10 | 99888 | 99897 | 80 % | 0 % | 0 % | 20 % | 332661967 |
85 | NC_015512 | GTTAG | 2 | 10 | 102752 | 102761 | 20 % | 40 % | 40 % | 0 % | 332661969 |
86 | NC_015512 | AAATG | 2 | 10 | 103005 | 103014 | 60 % | 20 % | 20 % | 0 % | 332661969 |
87 | NC_015512 | TTTAC | 2 | 10 | 103426 | 103435 | 20 % | 60 % | 0 % | 20 % | Non-Coding |
88 | NC_015512 | AAGTT | 2 | 10 | 104803 | 104812 | 40 % | 40 % | 20 % | 0 % | 332661970 |
89 | NC_015512 | ACAAA | 2 | 10 | 104925 | 104934 | 80 % | 0 % | 0 % | 20 % | 332661970 |
90 | NC_015512 | TCAAA | 2 | 10 | 105100 | 105109 | 60 % | 20 % | 0 % | 20 % | 332661970 |
91 | NC_015512 | CAAAA | 2 | 10 | 106701 | 106710 | 80 % | 0 % | 0 % | 20 % | 332661971 |
92 | NC_015512 | GCTAT | 2 | 10 | 106964 | 106973 | 20 % | 40 % | 20 % | 20 % | 332661971 |
93 | NC_015512 | CAAAA | 2 | 10 | 107209 | 107218 | 80 % | 0 % | 0 % | 20 % | 332661971 |
94 | NC_015512 | AAAAC | 2 | 10 | 107262 | 107271 | 80 % | 0 % | 0 % | 20 % | 332661971 |
95 | NC_015512 | TCGAA | 2 | 10 | 108852 | 108861 | 40 % | 20 % | 20 % | 20 % | 332661971 |
96 | NC_015512 | GTCGA | 2 | 10 | 109071 | 109080 | 20 % | 20 % | 40 % | 20 % | 332661971 |
97 | NC_015512 | AAAGG | 2 | 10 | 110511 | 110520 | 60 % | 0 % | 40 % | 0 % | 332661972 |
98 | NC_015512 | TCCAA | 2 | 10 | 111520 | 111529 | 40 % | 20 % | 0 % | 40 % | 332661973 |
99 | NC_015512 | GAAAG | 2 | 10 | 113738 | 113747 | 60 % | 0 % | 40 % | 0 % | 332661974 |
100 | NC_015512 | GTTTT | 2 | 10 | 115673 | 115682 | 0 % | 80 % | 20 % | 0 % | 332661975 |
101 | NC_015512 | ACCCC | 2 | 10 | 116932 | 116941 | 20 % | 0 % | 0 % | 80 % | 332661977 |
102 | NC_015512 | AATTC | 2 | 10 | 117968 | 117977 | 40 % | 40 % | 0 % | 20 % | 332661978 |
103 | NC_015512 | GTTCC | 2 | 10 | 117997 | 118006 | 0 % | 40 % | 20 % | 40 % | 332661978 |
104 | NC_015512 | GGGTT | 2 | 10 | 120476 | 120485 | 0 % | 40 % | 60 % | 0 % | 332661979 |
105 | NC_015512 | ACGTG | 2 | 10 | 121798 | 121807 | 20 % | 20 % | 40 % | 20 % | 332661979 |
106 | NC_015512 | TCTGC | 2 | 10 | 123346 | 123355 | 0 % | 40 % | 20 % | 40 % | 332661980 |
107 | NC_015512 | AGGTA | 2 | 10 | 124890 | 124899 | 40 % | 20 % | 40 % | 0 % | Non-Coding |
108 | NC_015512 | ATCTA | 2 | 10 | 127041 | 127050 | 40 % | 40 % | 0 % | 20 % | 332661984 |
109 | NC_015512 | AACAA | 2 | 10 | 127374 | 127383 | 80 % | 0 % | 0 % | 20 % | 332661984 |
110 | NC_015512 | GATTT | 2 | 10 | 127628 | 127637 | 20 % | 60 % | 20 % | 0 % | 332661984 |
111 | NC_015512 | ATTTG | 2 | 10 | 129604 | 129613 | 20 % | 60 % | 20 % | 0 % | 332661986 |
112 | NC_015512 | AAGGA | 2 | 10 | 131287 | 131296 | 60 % | 0 % | 40 % | 0 % | 332661987 |
113 | NC_015512 | CTTTT | 2 | 10 | 132275 | 132284 | 0 % | 80 % | 0 % | 20 % | 332661988 |
114 | NC_015512 | ACAAA | 2 | 10 | 132768 | 132777 | 80 % | 0 % | 0 % | 20 % | Non-Coding |
115 | NC_015512 | GAAAC | 2 | 10 | 132970 | 132979 | 60 % | 0 % | 20 % | 20 % | Non-Coding |
116 | NC_015512 | CAATC | 2 | 10 | 133923 | 133932 | 40 % | 20 % | 0 % | 40 % | 332661990 |
117 | NC_015512 | TAAAT | 2 | 10 | 137137 | 137146 | 60 % | 40 % | 0 % | 0 % | Non-Coding |
118 | NC_015512 | GCTGC | 2 | 10 | 143689 | 143698 | 0 % | 20 % | 40 % | 40 % | Non-Coding |