MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Marinithermus hydrothermalis DSM 14884 chromosome

Total Repeats: 2177

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S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
2001	NC_015387	TCA	2	6	2123677	2123682	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
2002	NC_015387	TGA	2	6	2123887	2123892	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
2003	NC_015387	CTC	2	6	2123912	2123917	0 %	33.33 %	0 %	66.67 %	Non-Coding
2004	NC_015387	GGA	2	6	2123954	2123959	33.33 %	0 %	66.67 %	0 %	Non-Coding
2005	NC_015387	CGC	2	6	2125634	2125639	0 %	0 %	33.33 %	66.67 %	Non-Coding
2006	NC_015387	TCC	2	6	2130681	2130686	0 %	33.33 %	0 %	66.67 %	Non-Coding
2007	NC_015387	CCG	2	6	2133542	2133547	0 %	0 %	33.33 %	66.67 %	Non-Coding
2008	NC_015387	GGC	2	6	2133583	2133588	0 %	0 %	66.67 %	33.33 %	Non-Coding
2009	NC_015387	GCG	2	6	2135296	2135301	0 %	0 %	66.67 %	33.33 %	Non-Coding
2010	NC_015387	TGT	2	6	2136971	2136976	0 %	66.67 %	33.33 %	0 %	Non-Coding
2011	NC_015387	CGG	2	6	2139785	2139790	0 %	0 %	66.67 %	33.33 %	Non-Coding
2012	NC_015387	GTG	2	6	2142486	2142491	0 %	33.33 %	66.67 %	0 %	Non-Coding
2013	NC_015387	AGG	2	6	2142502	2142507	33.33 %	0 %	66.67 %	0 %	Non-Coding
2014	NC_015387	CGT	2	6	2142849	2142854	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
2015	NC_015387	TCC	2	6	2142863	2142868	0 %	33.33 %	0 %	66.67 %	Non-Coding
2016	NC_015387	GAC	2	6	2142975	2142980	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
2017	NC_015387	GCA	2	6	2142987	2142992	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
2018	NC_015387	TTC	2	6	2143067	2143072	0 %	66.67 %	0 %	33.33 %	Non-Coding
2019	NC_015387	GGC	2	6	2143162	2143167	0 %	0 %	66.67 %	33.33 %	Non-Coding
2020	NC_015387	TCC	2	6	2143325	2143330	0 %	33.33 %	0 %	66.67 %	Non-Coding
2021	NC_015387	GCC	2	6	2143451	2143456	0 %	0 %	33.33 %	66.67 %	Non-Coding
2022	NC_015387	GCT	2	6	2143515	2143520	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
2023	NC_015387	TCC	2	6	2143615	2143620	0 %	33.33 %	0 %	66.67 %	Non-Coding
2024	NC_015387	GCG	2	6	2143626	2143631	0 %	0 %	66.67 %	33.33 %	Non-Coding
2025	NC_015387	CTG	2	6	2143672	2143677	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
2026	NC_015387	CGT	2	6	2143745	2143750	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
2027	NC_015387	CCG	2	6	2143922	2143927	0 %	0 %	33.33 %	66.67 %	Non-Coding
2028	NC_015387	CGC	2	6	2143985	2143990	0 %	0 %	33.33 %	66.67 %	Non-Coding
2029	NC_015387	CGC	2	6	2144037	2144042	0 %	0 %	33.33 %	66.67 %	Non-Coding
2030	NC_015387	AAC	2	6	2144043	2144048	66.67 %	0 %	0 %	33.33 %	Non-Coding
2031	NC_015387	CGC	2	6	2144100	2144105	0 %	0 %	33.33 %	66.67 %	Non-Coding
2032	NC_015387	TCT	2	6	2144200	2144205	0 %	66.67 %	0 %	33.33 %	Non-Coding
2033	NC_015387	GAT	2	6	2144347	2144352	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
2034	NC_015387	GGC	2	6	2144432	2144437	0 %	0 %	66.67 %	33.33 %	Non-Coding
2035	NC_015387	CAG	2	6	2144502	2144507	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
2036	NC_015387	TCT	2	6	2144536	2144541	0 %	66.67 %	0 %	33.33 %	Non-Coding
2037	NC_015387	GGC	2	6	2144554	2144559	0 %	0 %	66.67 %	33.33 %	Non-Coding
2038	NC_015387	CGC	2	6	2144634	2144639	0 %	0 %	33.33 %	66.67 %	Non-Coding
2039	NC_015387	ACT	2	6	2144669	2144674	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
2040	NC_015387	CCA	2	6	2144697	2144702	33.33 %	0 %	0 %	66.67 %	Non-Coding
2041	NC_015387	CAG	2	6	2144846	2144851	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
2042	NC_015387	AGG	2	6	2144914	2144919	33.33 %	0 %	66.67 %	0 %	Non-Coding
2043	NC_015387	GAG	2	6	2144927	2144932	33.33 %	0 %	66.67 %	0 %	Non-Coding
2044	NC_015387	GCC	2	6	2144945	2144950	0 %	0 %	33.33 %	66.67 %	Non-Coding
2045	NC_015387	ATC	2	6	2144976	2144981	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
2046	NC_015387	GTA	3	9	2145162	2145170	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
2047	NC_015387	CGC	3	9	2145189	2145197	0 %	0 %	33.33 %	66.67 %	Non-Coding
2048	NC_015387	ACC	2	6	2145634	2145639	33.33 %	0 %	0 %	66.67 %	Non-Coding
2049	NC_015387	CCG	2	6	2145750	2145755	0 %	0 %	33.33 %	66.67 %	Non-Coding
2050	NC_015387	CCA	2	6	2145759	2145764	33.33 %	0 %	0 %	66.67 %	Non-Coding
2051	NC_015387	TGA	2	6	2145857	2145862	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
2052	NC_015387	CTT	2	6	2146682	2146687	0 %	66.67 %	0 %	33.33 %	Non-Coding
2053	NC_015387	GTG	2	6	2146869	2146874	0 %	33.33 %	66.67 %	0 %	Non-Coding
2054	NC_015387	TCC	2	6	2146984	2146989	0 %	33.33 %	0 %	66.67 %	Non-Coding
2055	NC_015387	CCA	2	6	2146990	2146995	33.33 %	0 %	0 %	66.67 %	Non-Coding
2056	NC_015387	CCA	2	6	2147003	2147008	33.33 %	0 %	0 %	66.67 %	Non-Coding
2057	NC_015387	CCG	2	6	2147063	2147068	0 %	0 %	33.33 %	66.67 %	Non-Coding
2058	NC_015387	CCA	2	6	2147089	2147094	33.33 %	0 %	0 %	66.67 %	Non-Coding
2059	NC_015387	GCC	3	9	2147143	2147151	0 %	0 %	33.33 %	66.67 %	Non-Coding
2060	NC_015387	GTT	2	6	2147180	2147185	0 %	66.67 %	33.33 %	0 %	Non-Coding
2061	NC_015387	AGG	2	6	2147192	2147197	33.33 %	0 %	66.67 %	0 %	Non-Coding
2062	NC_015387	CCT	2	6	2147218	2147223	0 %	33.33 %	0 %	66.67 %	Non-Coding
2063	NC_015387	GCC	2	6	2148118	2148123	0 %	0 %	33.33 %	66.67 %	Non-Coding
2064	NC_015387	AGG	2	6	2148229	2148234	33.33 %	0 %	66.67 %	0 %	Non-Coding
2065	NC_015387	GGT	2	6	2151765	2151770	0 %	33.33 %	66.67 %	0 %	Non-Coding
2066	NC_015387	TAC	2	6	2153512	2153517	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
2067	NC_015387	GCC	2	6	2155316	2155321	0 %	0 %	33.33 %	66.67 %	Non-Coding
2068	NC_015387	ACC	2	6	2155327	2155332	33.33 %	0 %	0 %	66.67 %	Non-Coding
2069	NC_015387	AGC	2	6	2155399	2155404	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
2070	NC_015387	CCT	2	6	2156974	2156979	0 %	33.33 %	0 %	66.67 %	Non-Coding
2071	NC_015387	TCC	2	6	2158575	2158580	0 %	33.33 %	0 %	66.67 %	Non-Coding
2072	NC_015387	ACC	2	6	2158602	2158607	33.33 %	0 %	0 %	66.67 %	Non-Coding
2073	NC_015387	CCG	2	6	2158629	2158634	0 %	0 %	33.33 %	66.67 %	Non-Coding
2074	NC_015387	GCT	2	6	2161273	2161278	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
2075	NC_015387	AAC	2	6	2161300	2161305	66.67 %	0 %	0 %	33.33 %	Non-Coding
2076	NC_015387	GCC	2	6	2170128	2170133	0 %	0 %	33.33 %	66.67 %	Non-Coding
2077	NC_015387	GCG	2	6	2170180	2170185	0 %	0 %	66.67 %	33.33 %	Non-Coding
2078	NC_015387	CGC	2	6	2170274	2170279	0 %	0 %	33.33 %	66.67 %	Non-Coding
2079	NC_015387	GCC	2	6	2171595	2171600	0 %	0 %	33.33 %	66.67 %	Non-Coding
2080	NC_015387	GCG	2	6	2175892	2175897	0 %	0 %	66.67 %	33.33 %	Non-Coding
2081	NC_015387	GGC	2	6	2175917	2175922	0 %	0 %	66.67 %	33.33 %	Non-Coding
2082	NC_015387	CAG	2	6	2175975	2175980	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
2083	NC_015387	CGG	2	6	2176023	2176028	0 %	0 %	66.67 %	33.33 %	Non-Coding
2084	NC_015387	ACC	3	9	2176054	2176062	33.33 %	0 %	0 %	66.67 %	Non-Coding
2085	NC_015387	AGC	2	6	2176183	2176188	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
2086	NC_015387	GCC	2	6	2176192	2176197	0 %	0 %	33.33 %	66.67 %	Non-Coding
2087	NC_015387	CCG	2	6	2176241	2176246	0 %	0 %	33.33 %	66.67 %	Non-Coding
2088	NC_015387	GAG	2	6	2176290	2176295	33.33 %	0 %	66.67 %	0 %	Non-Coding
2089	NC_015387	GCG	2	6	2176323	2176328	0 %	0 %	66.67 %	33.33 %	Non-Coding
2090	NC_015387	CGC	2	6	2176465	2176470	0 %	0 %	33.33 %	66.67 %	Non-Coding
2091	NC_015387	CGG	2	6	2176478	2176483	0 %	0 %	66.67 %	33.33 %	Non-Coding
2092	NC_015387	CAC	2	6	2176647	2176652	33.33 %	0 %	0 %	66.67 %	Non-Coding
2093	NC_015387	CGC	2	6	2176767	2176772	0 %	0 %	33.33 %	66.67 %	Non-Coding
2094	NC_015387	GGC	2	6	2176971	2176976	0 %	0 %	66.67 %	33.33 %	Non-Coding
2095	NC_015387	GGT	2	6	2176995	2177000	0 %	33.33 %	66.67 %	0 %	Non-Coding
2096	NC_015387	TCC	2	6	2177070	2177075	0 %	33.33 %	0 %	66.67 %	Non-Coding
2097	NC_015387	CAC	2	6	2177084	2177089	33.33 %	0 %	0 %	66.67 %	Non-Coding
2098	NC_015387	CAG	2	6	2177091	2177096	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
2099	NC_015387	ACT	2	6	2179302	2179307	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
2100	NC_015387	CGG	2	6	2179327	2179332	0 %	0 %	66.67 %	33.33 %	Non-Coding
2101	NC_015387	CCG	2	6	2179334	2179339	0 %	0 %	33.33 %	66.67 %	Non-Coding
2102	NC_015387	ACA	2	6	2179421	2179426	66.67 %	0 %	0 %	33.33 %	Non-Coding
2103	NC_015387	GCT	2	6	2179961	2179966	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
2104	NC_015387	ATG	2	6	2180001	2180006	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
2105	NC_015387	GCT	2	6	2188140	2188145	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
2106	NC_015387	GGC	2	6	2192333	2192338	0 %	0 %	66.67 %	33.33 %	Non-Coding
2107	NC_015387	AGG	2	6	2192363	2192368	33.33 %	0 %	66.67 %	0 %	Non-Coding
2108	NC_015387	CCG	2	6	2195934	2195939	0 %	0 %	33.33 %	66.67 %	Non-Coding
2109	NC_015387	CGG	2	6	2195950	2195955	0 %	0 %	66.67 %	33.33 %	Non-Coding
2110	NC_015387	ACC	2	6	2195978	2195983	33.33 %	0 %	0 %	66.67 %	Non-Coding
2111	NC_015387	CCG	2	6	2195988	2195993	0 %	0 %	33.33 %	66.67 %	Non-Coding
2112	NC_015387	TCC	2	6	2196023	2196028	0 %	33.33 %	0 %	66.67 %	Non-Coding
2113	NC_015387	CCG	2	6	2196187	2196192	0 %	0 %	33.33 %	66.67 %	Non-Coding
2114	NC_015387	GCG	2	6	2196324	2196329	0 %	0 %	66.67 %	33.33 %	Non-Coding
2115	NC_015387	TGG	2	6	2196438	2196443	0 %	33.33 %	66.67 %	0 %	Non-Coding
2116	NC_015387	GGA	2	6	2196504	2196509	33.33 %	0 %	66.67 %	0 %	Non-Coding
2117	NC_015387	CAA	2	6	2197799	2197804	66.67 %	0 %	0 %	33.33 %	Non-Coding
2118	NC_015387	TGA	2	6	2197888	2197893	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
2119	NC_015387	CCT	2	6	2197934	2197939	0 %	33.33 %	0 %	66.67 %	Non-Coding
2120	NC_015387	CTC	3	9	2197992	2198000	0 %	33.33 %	0 %	66.67 %	Non-Coding
2121	NC_015387	TGG	2	6	2198176	2198181	0 %	33.33 %	66.67 %	0 %	Non-Coding
2122	NC_015387	TGG	2	6	2198266	2198271	0 %	33.33 %	66.67 %	0 %	Non-Coding
2123	NC_015387	CCT	2	6	2198366	2198371	0 %	33.33 %	0 %	66.67 %	Non-Coding
2124	NC_015387	CAC	2	6	2198438	2198443	33.33 %	0 %	0 %	66.67 %	Non-Coding
2125	NC_015387	GGT	2	6	2198482	2198487	0 %	33.33 %	66.67 %	0 %	Non-Coding
2126	NC_015387	GCG	2	6	2198494	2198499	0 %	0 %	66.67 %	33.33 %	Non-Coding
2127	NC_015387	GGC	2	6	2198541	2198546	0 %	0 %	66.67 %	33.33 %	Non-Coding
2128	NC_015387	GTG	2	6	2198642	2198647	0 %	33.33 %	66.67 %	0 %	Non-Coding
2129	NC_015387	CTT	2	6	2198713	2198718	0 %	66.67 %	0 %	33.33 %	Non-Coding
2130	NC_015387	GTG	2	6	2198900	2198905	0 %	33.33 %	66.67 %	0 %	Non-Coding
2131	NC_015387	GCC	2	6	2198944	2198949	0 %	0 %	33.33 %	66.67 %	Non-Coding
2132	NC_015387	CGG	2	6	2200166	2200171	0 %	0 %	66.67 %	33.33 %	Non-Coding
2133	NC_015387	GTA	2	6	2202569	2202574	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
2134	NC_015387	TCC	2	6	2212455	2212460	0 %	33.33 %	0 %	66.67 %	Non-Coding
2135	NC_015387	CCT	2	6	2212928	2212933	0 %	33.33 %	0 %	66.67 %	Non-Coding
2136	NC_015387	TCA	2	6	2213004	2213009	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
2137	NC_015387	TCC	2	6	2215699	2215704	0 %	33.33 %	0 %	66.67 %	Non-Coding
2138	NC_015387	CCT	2	6	2218220	2218225	0 %	33.33 %	0 %	66.67 %	Non-Coding
2139	NC_015387	GAG	2	6	2218234	2218239	33.33 %	0 %	66.67 %	0 %	Non-Coding
2140	NC_015387	TGA	2	6	2218924	2218929	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
2141	NC_015387	CCT	2	6	2218970	2218975	0 %	33.33 %	0 %	66.67 %	Non-Coding
2142	NC_015387	CTC	3	9	2219028	2219036	0 %	33.33 %	0 %	66.67 %	Non-Coding
2143	NC_015387	TGG	2	6	2219212	2219217	0 %	33.33 %	66.67 %	0 %	Non-Coding
2144	NC_015387	TGG	2	6	2219302	2219307	0 %	33.33 %	66.67 %	0 %	Non-Coding
2145	NC_015387	CCT	2	6	2219402	2219407	0 %	33.33 %	0 %	66.67 %	Non-Coding
2146	NC_015387	CAC	2	6	2219474	2219479	33.33 %	0 %	0 %	66.67 %	Non-Coding
2147	NC_015387	GGT	2	6	2219518	2219523	0 %	33.33 %	66.67 %	0 %	Non-Coding
2148	NC_015387	GCG	2	6	2219530	2219535	0 %	0 %	66.67 %	33.33 %	Non-Coding
2149	NC_015387	GGC	2	6	2219577	2219582	0 %	0 %	66.67 %	33.33 %	Non-Coding
2150	NC_015387	GTG	2	6	2219678	2219683	0 %	33.33 %	66.67 %	0 %	Non-Coding
2151	NC_015387	CTT	2	6	2219749	2219754	0 %	66.67 %	0 %	33.33 %	Non-Coding
2152	NC_015387	GTG	2	6	2219936	2219941	0 %	33.33 %	66.67 %	0 %	Non-Coding
2153	NC_015387	TAA	2	6	2221207	2221212	66.67 %	33.33 %	0 %	0 %	Non-Coding
2154	NC_015387	CCT	2	6	2222828	2222833	0 %	33.33 %	0 %	66.67 %	Non-Coding
2155	NC_015387	GCC	2	6	2222898	2222903	0 %	0 %	33.33 %	66.67 %	Non-Coding
2156	NC_015387	GCG	2	6	2222977	2222982	0 %	0 %	66.67 %	33.33 %	Non-Coding
2157	NC_015387	GCG	2	6	2223023	2223028	0 %	0 %	66.67 %	33.33 %	Non-Coding
2158	NC_015387	ACG	2	6	2225203	2225208	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
2159	NC_015387	CTC	2	6	2229834	2229839	0 %	33.33 %	0 %	66.67 %	Non-Coding
2160	NC_015387	TTA	2	6	2231965	2231970	33.33 %	66.67 %	0 %	0 %	Non-Coding
2161	NC_015387	CCT	2	6	2237627	2237632	0 %	33.33 %	0 %	66.67 %	Non-Coding
2162	NC_015387	TCC	2	6	2237691	2237696	0 %	33.33 %	0 %	66.67 %	Non-Coding
2163	NC_015387	AGG	2	6	2239852	2239857	33.33 %	0 %	66.67 %	0 %	Non-Coding
2164	NC_015387	GAA	2	6	2246329	2246334	66.67 %	0 %	33.33 %	0 %	Non-Coding
2165	NC_015387	GAA	2	6	2247292	2247297	66.67 %	0 %	33.33 %	0 %	Non-Coding
2166	NC_015387	CGG	2	6	2253485	2253490	0 %	0 %	66.67 %	33.33 %	Non-Coding
2167	NC_015387	GCC	2	6	2257496	2257501	0 %	0 %	33.33 %	66.67 %	Non-Coding
2168	NC_015387	TGA	2	6	2259860	2259865	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
2169	NC_015387	TCG	2	6	2260968	2260973	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
2170	NC_015387	CAC	2	6	2261369	2261374	33.33 %	0 %	0 %	66.67 %	Non-Coding
2171	NC_015387	TCC	2	6	2261397	2261402	0 %	33.33 %	0 %	66.67 %	Non-Coding
2172	NC_015387	CGC	2	6	2261548	2261553	0 %	0 %	33.33 %	66.67 %	Non-Coding
2173	NC_015387	GGA	2	6	2261587	2261592	33.33 %	0 %	66.67 %	0 %	Non-Coding
2174	NC_015387	CAC	2	6	2261618	2261623	33.33 %	0 %	0 %	66.67 %	Non-Coding
2175	NC_015387	CAC	2	6	2261630	2261635	33.33 %	0 %	0 %	66.67 %	Non-Coding
2176	NC_015387	AGC	2	6	2261718	2261723	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
2177	NC_015387	CCA	2	6	2261929	2261934	33.33 %	0 %	0 %	66.67 %	Non-Coding

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©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.