MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Lactobacillus amylovorus GRL 1112 plasmid2

Total Repeats: 81

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_015322	TCA	2	6	5	10	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
2	NC_015322	TAT	2	6	32	37	33.33 %	66.67 %	0 %	0 %	Non-Coding
3	NC_015322	AAC	2	6	151	156	66.67 %	0 %	0 %	33.33 %	Non-Coding
4	NC_015322	ACT	2	6	203	208	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
5	NC_015322	TTC	2	6	539	544	0 %	66.67 %	0 %	33.33 %	Non-Coding
6	NC_015322	TAC	2	6	548	553	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
7	NC_015322	ATG	2	6	558	563	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
8	NC_015322	AGC	2	6	676	681	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
9	NC_015322	TGA	2	6	924	929	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
10	NC_015322	ATC	2	6	936	941	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
11	NC_015322	ATG	2	6	1441	1446	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
12	NC_015322	GCT	2	6	1614	1619	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
13	NC_015322	TTC	2	6	7168	7173	0 %	66.67 %	0 %	33.33 %	Non-Coding
14	NC_015322	TTC	2	6	7207	7212	0 %	66.67 %	0 %	33.33 %	Non-Coding
15	NC_015322	CAC	2	6	7266	7271	33.33 %	0 %	0 %	66.67 %	Non-Coding
16	NC_015322	TCA	2	6	7622	7627	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
17	NC_015322	CTT	2	6	7659	7664	0 %	66.67 %	0 %	33.33 %	Non-Coding
18	NC_015322	ATC	2	6	7848	7853	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
19	NC_015322	TAT	2	6	7889	7894	33.33 %	66.67 %	0 %	0 %	Non-Coding
20	NC_015322	ATT	2	6	7907	7912	33.33 %	66.67 %	0 %	0 %	Non-Coding
21	NC_015322	TTG	2	6	7953	7958	0 %	66.67 %	33.33 %	0 %	Non-Coding
22	NC_015322	GTT	2	6	8041	8046	0 %	66.67 %	33.33 %	0 %	Non-Coding
23	NC_015322	ATA	2	6	8146	8151	66.67 %	33.33 %	0 %	0 %	Non-Coding
24	NC_015322	ATT	2	6	8788	8793	33.33 %	66.67 %	0 %	0 %	Non-Coding
25	NC_015322	ATG	2	6	8812	8817	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
26	NC_015322	CAT	2	6	8846	8851	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
27	NC_015322	TTA	2	6	9426	9431	33.33 %	66.67 %	0 %	0 %	Non-Coding
28	NC_015322	GCG	2	6	11213	11218	0 %	0 %	66.67 %	33.33 %	Non-Coding
29	NC_015322	GAA	3	9	11223	11231	66.67 %	0 %	33.33 %	0 %	Non-Coding
30	NC_015322	TAA	2	6	11275	11280	66.67 %	33.33 %	0 %	0 %	Non-Coding
31	NC_015322	TGA	2	6	13265	13270	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
32	NC_015322	ATC	2	6	13277	13282	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
33	NC_015322	ATG	2	6	13782	13787	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
34	NC_015322	GCT	2	6	13955	13960	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
35	NC_015322	CCT	2	6	17085	17090	0 %	33.33 %	0 %	66.67 %	Non-Coding
36	NC_015322	TGC	2	6	17151	17156	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
37	NC_015322	ATC	2	6	17837	17842	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
38	NC_015322	CCA	2	6	17874	17879	33.33 %	0 %	0 %	66.67 %	Non-Coding
39	NC_015322	ATT	2	6	19307	19312	33.33 %	66.67 %	0 %	0 %	Non-Coding
40	NC_015322	TAC	2	6	19324	19329	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
41	NC_015322	ATT	2	6	19382	19387	33.33 %	66.67 %	0 %	0 %	Non-Coding
42	NC_015322	GTA	2	6	19392	19397	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
43	NC_015322	GTA	2	6	19409	19414	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
44	NC_015322	GTA	2	6	19443	19448	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
45	NC_015322	TAC	2	6	19529	19534	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
46	NC_015322	TAC	2	6	19563	19568	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
47	NC_015322	AAT	2	6	19605	19610	66.67 %	33.33 %	0 %	0 %	Non-Coding
48	NC_015322	TGT	2	6	19620	19625	0 %	66.67 %	33.33 %	0 %	Non-Coding
49	NC_015322	TTA	2	6	20606	20611	33.33 %	66.67 %	0 %	0 %	Non-Coding
50	NC_015322	ATT	2	6	20623	20628	33.33 %	66.67 %	0 %	0 %	Non-Coding
51	NC_015322	CTA	2	6	20652	20657	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
52	NC_015322	TTA	2	6	20696	20701	33.33 %	66.67 %	0 %	0 %	Non-Coding
53	NC_015322	GTA	2	6	20762	20767	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
54	NC_015322	CAA	2	6	20801	20806	66.67 %	0 %	0 %	33.33 %	Non-Coding
55	NC_015322	CTT	2	6	20995	21000	0 %	66.67 %	0 %	33.33 %	Non-Coding
56	NC_015322	CAA	2	6	21022	21027	66.67 %	0 %	0 %	33.33 %	Non-Coding
57	NC_015322	TAA	2	6	21050	21055	66.67 %	33.33 %	0 %	0 %	Non-Coding
58	NC_015322	TAT	2	6	21062	21067	33.33 %	66.67 %	0 %	0 %	Non-Coding
59	NC_015322	GTA	2	6	21071	21076	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
60	NC_015322	CTA	2	6	21161	21166	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
61	NC_015322	AAC	2	6	21462	21467	66.67 %	0 %	0 %	33.33 %	Non-Coding
62	NC_015322	TGT	2	6	21473	21478	0 %	66.67 %	33.33 %	0 %	Non-Coding
63	NC_015322	TAG	2	6	21486	21491	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
64	NC_015322	AAT	2	6	21617	21622	66.67 %	33.33 %	0 %	0 %	Non-Coding
65	NC_015322	ATG	2	6	21737	21742	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
66	NC_015322	CAT	2	6	21772	21777	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
67	NC_015322	TAG	2	6	22371	22376	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
68	NC_015322	GCG	2	6	24155	24160	0 %	0 %	66.67 %	33.33 %	Non-Coding
69	NC_015322	GAA	3	9	24165	24173	66.67 %	0 %	33.33 %	0 %	Non-Coding
70	NC_015322	TAA	2	6	24217	24222	66.67 %	33.33 %	0 %	0 %	Non-Coding
71	NC_015322	GAA	2	6	24397	24402	66.67 %	0 %	33.33 %	0 %	Non-Coding
72	NC_015322	TGA	2	6	24436	24441	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
73	NC_015322	TGA	2	6	24604	24609	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
74	NC_015322	GCT	2	6	24650	24655	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
75	NC_015322	CAA	2	6	24717	24722	66.67 %	0 %	0 %	33.33 %	Non-Coding
76	NC_015322	AAG	2	6	24807	24812	66.67 %	0 %	33.33 %	0 %	Non-Coding
77	NC_015322	CAT	2	6	24899	24904	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
78	NC_015322	TGG	2	6	25011	25016	0 %	33.33 %	66.67 %	0 %	Non-Coding
79	NC_015322	TGT	2	6	25021	25026	0 %	66.67 %	33.33 %	0 %	Non-Coding
80	NC_015322	GAC	2	6	25080	25085	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
81	NC_015322	AAG	2	6	25166	25171	66.67 %	0 %	33.33 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.